RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 FLT4P35916 1363 aa31.75■■■□□ 2.67
CCDC61-207ENST00000599044 SHANK3Q9BYB0 1731 aa31.75■■■□□ 2.67
CCDC61-207ENST00000599044 EIF4G2P78344 907 aaKnown RBP eCLIP31.74■■■□□ 2.67
CCDC61-207ENST00000599044 LRRC4BQ9NT99 713 aa31.74■■■□□ 2.67
CCDC61-207ENST00000599044 ZBTB7AO95365 584 aa31.73■■■□□ 2.67
CCDC61-207ENST00000599044 PRIM1P49642 420 aaKnown RBP31.73■■■□□ 2.67
CCDC61-207ENST00000599044 SMG6Q86US8 1419 aaKnown RBP31.72■■■□□ 2.67
CCDC61-207ENST00000599044 KIF24Q5T7B8 1368 aa31.7■■■□□ 2.67
CCDC61-207ENST00000599044 SYTL4Q96C24 671 aaPredicted RBP31.7■■■□□ 2.67
CCDC61-207ENST00000599044 PAPPAQ13219 1627 aa31.7■■■□□ 2.66
CCDC61-207ENST00000599044 PPM1GO15355 546 aaPredicted RBP31.69■■■□□ 2.66
CCDC61-207ENST00000599044 CGNL1Q0VF96 1302 aa31.69■■■□□ 2.66
CCDC61-207ENST00000599044 NSD2O96028 1365 aa31.68■■■□□ 2.66
CCDC61-207ENST00000599044 RAPGEF4Q8WZA2 1011 aa31.68■■■□□ 2.66
CCDC61-207ENST00000599044 PPP1R1BQ9UD71 204 aaPredicted RBP31.68■■■□□ 2.66
CCDC61-207ENST00000599044 ATF5Q9Y2D1 282 aaPredicted RBP31.68■■■□□ 2.66
CCDC61-207ENST00000599044 ZNF827Q17R98 1081 aa31.67■■■□□ 2.66
CCDC61-207ENST00000599044 TATP17735 454 aaPredicted RBP31.66■■■□□ 2.66
CCDC61-207ENST00000599044 KCNQ4P56696 695 aa31.66■■■□□ 2.66
CCDC61-207ENST00000599044 DOT1LQ8TEK3 1739 aa31.66■■■□□ 2.66
CCDC61-207ENST00000599044 PTGER2P43116 358 aa31.65■■■□□ 2.66
CCDC61-207ENST00000599044 POLKQ9UBT6 870 aa31.64■■■□□ 2.66
CCDC61-207ENST00000599044 PANK3Q9H999 370 aa31.63■■■□□ 2.65
CCDC61-207ENST00000599044 TNNT2P45379 298 aaPredicted RBP31.62■■■□□ 2.65
CCDC61-207ENST00000599044 WASHC2AQ641Q2 1341 aa31.62■■■□□ 2.65
CCDC61-207ENST00000599044 AKT1S1Q96B36 256 aa31.6■■■□□ 2.65
CCDC61-207ENST00000599044 ANKRD26Q9UPS8 1709 aa31.6■■■□□ 2.65
CCDC61-207ENST00000599044 SLC27A3Q5K4L6 730 aa31.59■■■□□ 2.65
CCDC61-207ENST00000599044 QSER1Q2KHR3 1735 aa31.58■■■□□ 2.65
CCDC61-207ENST00000599044 CYP27B1O15528 508 aa31.58■■■□□ 2.65
CCDC61-207ENST00000599044 NCAPD2Q15021 1401 aa31.58■■■□□ 2.65
CCDC61-207ENST00000599044 EYA1Q99502 592 aa31.57■■■□□ 2.64
CCDC61-207ENST00000599044 PCDH11XQ9BZA7 1347 aa31.56■■■□□ 2.64
CCDC61-207ENST00000599044 PCDH11YQ9BZA8 1340 aa31.56■■■□□ 2.64
CCDC61-207ENST00000599044 SGIP1Q9BQI5 828 aa31.56■■■□□ 2.64
CCDC61-207ENST00000599044 MTFR1LQ9H019 292 aa31.56■■■□□ 2.64
CCDC61-207ENST00000599044 MAP2P11137 1827 aaKnown RBP31.56■■■□□ 2.64
CCDC61-207ENST00000599044 TUBGCP6Q96RT7 1819 aa31.54■■■□□ 2.64
CCDC61-207ENST00000599044 LY75O60449 1722 aa31.53■■■□□ 2.64
CCDC61-207ENST00000599044 EIF4A2Q14240 407 aaKnown RBP31.51■■■□□ 2.63
CCDC61-207ENST00000599044 CCNL1Q9UK58 526 aaPredicted RBP31.5■■■□□ 2.63
CCDC61-207ENST00000599044 PNPLA7Q6ZV29 1317 aa31.49■■■□□ 2.63
CCDC61-207ENST00000599044 MPRIPQ6WCQ1 1025 aa31.48■■■□□ 2.63
CCDC61-207ENST00000599044 COL24A1Q17RW2 1714 aa31.48■■■□□ 2.63
CCDC61-207ENST00000599044 PKD1L3Q7Z443 1732 aa31.48■■■□□ 2.63
CCDC61-207ENST00000599044 YY1P25490 414 aa31.47■■■□□ 2.63
CCDC61-207ENST00000599044 TFCP2L1Q9NZI6 479 aa31.47■■■□□ 2.63
CCDC61-207ENST00000599044 FHDC1Q9C0D6 1143 aaPredicted RBP31.46■■■□□ 2.63
CCDC61-207ENST00000599044 TOGARAM1Q9Y4F4 1720 aa31.46■■■□□ 2.63
CCDC61-207ENST00000599044 DCAF8L1A6NGE4 600 aa31.44■■■□□ 2.62
CCDC61-207ENST00000599044 NKX1-1Q15270 411 aaPredicted RBP31.44■■■□□ 2.62
CCDC61-207ENST00000599044 SPG7Q9UQ90 795 aa31.44■■■□□ 2.62
CCDC61-207ENST00000599044 CHD4Q14839 1912 aa31.43■■■□□ 2.62
CCDC61-207ENST00000599044 SYT17Q9BSW7 474 aa31.43■■■□□ 2.62
CCDC61-207ENST00000599044 ARXQ96QS3 562 aa31.42■■■□□ 2.62
CCDC61-207ENST00000599044 KIF7Q2M1P5 1343 aa31.42■■■□□ 2.62
CCDC61-207ENST00000599044 MORC1Q86VD1 984 aa31.41■■■□□ 2.62
CCDC61-207ENST00000599044 PIGBQ92521 554 aa31.41■■■□□ 2.62
CCDC61-207ENST00000599044 PALLDQ8WX93 1383 aa31.41■■■□□ 2.62
CCDC61-207ENST00000599044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.4■■■□□ 2.62
CCDC61-207ENST00000599044 PHKG2P15735 406 aa31.38■■■□□ 2.61
CCDC61-207ENST00000599044 SLC16A10Q8TF71 515 aa31.38■■■□□ 2.61
CCDC61-207ENST00000599044 IGSF1Q8N6C5 1336 aa31.38■■■□□ 2.61
CCDC61-207ENST00000599044 KNSTRNQ9Y448 316 aa31.37■■■□□ 2.61
CCDC61-207ENST00000599044 ITGB4P16144 1822 aa31.37■■■□□ 2.61
CCDC61-207ENST00000599044 COL23A1Q86Y22 540 aaPredicted RBP31.36■■■□□ 2.61
CCDC61-207ENST00000599044 UTRNP46939 3433 aa31.36■■■□□ 2.61
CCDC61-207ENST00000599044 AMER1Q5JTC6 1135 aaPredicted RBP31.35■■■□□ 2.61
CCDC61-207ENST00000599044 IFNL2Q8IZJ0 200 aa31.34■■■□□ 2.61
CCDC61-207ENST00000599044 MAP3K5Q99683 1374 aa31.33■■■□□ 2.61
CCDC61-207ENST00000599044 TAF1LQ8IZX4 1826 aa31.33■■■□□ 2.61
CCDC61-207ENST00000599044 C5P01031 1676 aa31.32■■■□□ 2.6
CCDC61-207ENST00000599044 MSH5O43196 834 aa31.31■■■□□ 2.6
CCDC61-207ENST00000599044 AEBP1Q8IUX7 1158 aa31.31■■■□□ 2.6
CCDC61-207ENST00000599044 SMARCC1Q92922 1105 aaPredicted RBP31.31■■■□□ 2.6
CCDC61-207ENST00000599044 AMIGO3Q86WK7 504 aa31.3■■■□□ 2.6
CCDC61-207ENST00000599044 ASAP1Q9ULH1 1129 aa31.3■■■□□ 2.6
CCDC61-207ENST00000599044 TMOD3Q9NYL9 352 aa31.29■■■□□ 2.6
CCDC61-207ENST00000599044 PER1O15534 1290 aaPredicted RBP31.28■■■□□ 2.6
CCDC61-207ENST00000599044 POLD1P28340 1107 aa31.28■■■□□ 2.6
CCDC61-207ENST00000599044 SMIM5Q71RC9 77 aa31.28■■■□□ 2.6
CCDC61-207ENST00000599044 LOC102724428A0A0B4J2F2 783 aa31.25■■■□□ 2.59
CCDC61-207ENST00000599044 IL13P35225 146 aa31.25■■■□□ 2.59
CCDC61-207ENST00000599044 SIK1P57059 783 aa31.25■■■□□ 2.59
CCDC61-207ENST00000599044 MSL1Q68DK7 614 aa31.25■■■□□ 2.59
CCDC61-207ENST00000599044 KLHL34Q8N239 644 aa31.25■■■□□ 2.59
CCDC61-207ENST00000599044 ATG3Q9NT62 314 aa31.24■■■□□ 2.59
CCDC61-207ENST00000599044 C4BP0C0L5 1744 aa31.24■■■□□ 2.59
CCDC61-207ENST00000599044 PLEKHG2Q9H7P9 1386 aa31.23■■■□□ 2.59
CCDC61-207ENST00000599044 PLEKHO1Q53GL0 409 aaPredicted RBP31.23■■■□□ 2.59
CCDC61-207ENST00000599044 LINC00116Q8NCU8 138 aa31.23■■■□□ 2.59
CCDC61-207ENST00000599044 ITPK1Q13572 414 aa31.22■■■□□ 2.59
CCDC61-207ENST00000599044 SULT6B1Q6IMI4 303 aa31.22■■■□□ 2.59
CCDC61-207ENST00000599044 ZNF530Q6P9A1 599 aaPredicted RBP31.21■■■□□ 2.59
CCDC61-207ENST00000599044 AK7Q96M32 723 aa31.2■■■□□ 2.59
CCDC61-207ENST00000599044 KDM6AO15550 1401 aaPredicted RBP31.19■■■□□ 2.58
CCDC61-207ENST00000599044 MTHFSP49914 203 aa31.19■■■□□ 2.58
CCDC61-207ENST00000599044 CC2D1BQ5T0F9 858 aaKnown RBP31.19■■■□□ 2.58
CCDC61-207ENST00000599044 NLGN2Q8NFZ4 835 aa31.19■■■□□ 2.58
CCDC61-207ENST00000599044 DCAF5Q96JK2 942 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms