RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 BCL9O00512 1426 aa27.3■■□□□ 1.96
PNKP-211ENST00000598020 SULT6B1Q6IMI4 303 aa27.29■■□□□ 1.96
PNKP-211ENST00000598020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.29■■□□□ 1.96
PNKP-211ENST00000598020 NUDCQ9Y266 331 aa27.28■■□□□ 1.96
PNKP-211ENST00000598020 PKD1L3Q7Z443 1732 aa27.27■■□□□ 1.96
PNKP-211ENST00000598020 SHANK3Q9BYB0 1731 aa27.27■■□□□ 1.96
PNKP-211ENST00000598020 FAM182BQ5T319 152 aa27.27■■□□□ 1.96
PNKP-211ENST00000598020 AEBP1Q8IUX7 1158 aa27.27■■□□□ 1.96
PNKP-211ENST00000598020 UPF1Q92900 1129 aaKnown RBP eCLIP27.25■■□□□ 1.95
PNKP-211ENST00000598020 CCDC125Q86Z20 511 aa27.24■■□□□ 1.95
PNKP-211ENST00000598020 U2SURPO15042 1029 aaKnown RBP27.23■■□□□ 1.95
PNKP-211ENST00000598020 ANP32CO43423 234 aa27.23■■□□□ 1.95
PNKP-211ENST00000598020 SPG7Q9UQ90 795 aa27.23■■□□□ 1.95
PNKP-211ENST00000598020 PCDH11XQ9BZA7 1347 aa27.22■■□□□ 1.95
PNKP-211ENST00000598020 PCDH11YQ9BZA8 1340 aa27.22■■□□□ 1.95
PNKP-211ENST00000598020 HMOX1P09601 288 aa27.21■■□□□ 1.95
PNKP-211ENST00000598020 AMOTQ4VCS5 1084 aa27.21■■□□□ 1.95
PNKP-211ENST00000598020 DDX54Q8TDD1 881 aaKnown RBP27.21■■□□□ 1.95
PNKP-211ENST00000598020 EP400Q96L91 3159 aa27.2■■□□□ 1.94
PNKP-211ENST00000598020 SBF2Q86WG5 1849 aa27.19■■□□□ 1.94
PNKP-211ENST00000598020 PLEKHO1Q53GL0 409 aaPredicted RBP27.19■■□□□ 1.94
PNKP-211ENST00000598020 CYP27B1O15528 508 aa27.18■■□□□ 1.94
PNKP-211ENST00000598020 FCHSD2O94868 740 aa27.17■■□□□ 1.94
PNKP-211ENST00000598020 U2AF1L5P0DN76 240 aaPredicted RBP27.17■■□□□ 1.94
PNKP-211ENST00000598020 U2AF1Q01081 240 aaKnown RBP eCLIP27.17■■□□□ 1.94
PNKP-211ENST00000598020 NKX1-1Q15270 411 aaPredicted RBP27.16■■□□□ 1.94
PNKP-211ENST00000598020 RSPH6AQ9H0K4 717 aa27.16■■□□□ 1.94
PNKP-211ENST00000598020 IFNL2Q8IZJ0 200 aa27.15■■□□□ 1.94
PNKP-211ENST00000598020 TRIM37O94972 964 aa27.13■■□□□ 1.93
PNKP-211ENST00000598020 PHKG2P15735 406 aa27.13■■□□□ 1.93
PNKP-211ENST00000598020 BCL11BQ9C0K0 894 aaPredicted RBP27.12■■□□□ 1.93
PNKP-211ENST00000598020 TNS1Q9HBL0 1735 aaKnown RBP27.11■■□□□ 1.93
PNKP-211ENST00000598020 NHSQ6T4R5 1651 aa27.11■■□□□ 1.93
PNKP-211ENST00000598020 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
PNKP-211ENST00000598020 PRKAR2BP31323 418 aa27.1■■□□□ 1.93
PNKP-211ENST00000598020 SF3B2Q13435 895 aaKnown RBP27.1■■□□□ 1.93
PNKP-211ENST00000598020 ZNF530Q6P9A1 599 aaPredicted RBP27.1■■□□□ 1.93
PNKP-211ENST00000598020 HSP90AB1P08238 724 aaKnown RBP27.08■■□□□ 1.93
PNKP-211ENST00000598020 MTHFSDQ2M296 383 aaKnown RBP27.08■■□□□ 1.93
PNKP-211ENST00000598020 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
PNKP-211ENST00000598020 KCNQ2O43526 872 aa27.06■■□□□ 1.92
PNKP-211ENST00000598020 AKAP4Q5JQC9 854 aa27.06■■□□□ 1.92
PNKP-211ENST00000598020 C1orf141Q5JVX7 400 aa27.06■■□□□ 1.92
PNKP-211ENST00000598020 ACSBG1Q96GR2 724 aa27.06■■□□□ 1.92
PNKP-211ENST00000598020 DOT1LQ8TEK3 1739 aa27.06■■□□□ 1.92
PNKP-211ENST00000598020 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
PNKP-211ENST00000598020 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
PNKP-211ENST00000598020 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
PNKP-211ENST00000598020 CCDC184Q52MB2 194 aa27.04■■□□□ 1.92
PNKP-211ENST00000598020 PTF1AQ7RTS3 328 aa27.04■■□□□ 1.92
PNKP-211ENST00000598020 DCAF5Q96JK2 942 aa27.04■■□□□ 1.92
PNKP-211ENST00000598020 BAG6P46379 1132 aa27.03■■□□□ 1.92
PNKP-211ENST00000598020 PRIM1P49642 420 aaKnown RBP27.03■■□□□ 1.92
PNKP-211ENST00000598020 WDR43Q15061 677 aaKnown RBP eCLIP27.03■■□□□ 1.92
PNKP-211ENST00000598020 TOGARAM1Q9Y4F4 1720 aa27.02■■□□□ 1.92
PNKP-211ENST00000598020 APBA3O96018 575 aa27.02■■□□□ 1.92
PNKP-211ENST00000598020 PLSCR1O15162 318 aa27.01■■□□□ 1.91
PNKP-211ENST00000598020 KDM6AO15550 1401 aaPredicted RBP27■■□□□ 1.91
PNKP-211ENST00000598020 ERVV-2B6SEH9 535 aa27■■□□□ 1.91
PNKP-211ENST00000598020 BTAF1O14981 1849 aa27■■□□□ 1.91
PNKP-211ENST00000598020 ITGB4P16144 1822 aa27■■□□□ 1.91
PNKP-211ENST00000598020 NEFMP07197 916 aa26.99■■□□□ 1.91
PNKP-211ENST00000598020 DIEXFQ68CQ4 756 aaKnown RBP26.99■■□□□ 1.91
PNKP-211ENST00000598020 DEFB132Q7Z7B7 95 aa26.99■■□□□ 1.91
PNKP-211ENST00000598020 ADAMTS8Q9UP79 889 aa26.99■■□□□ 1.91
PNKP-211ENST00000598020 RGPD3A6NKT7 1758 aaPredicted RBP26.99■■□□□ 1.91
PNKP-211ENST00000598020 RGPD4Q7Z3J3 1758 aa26.99■■□□□ 1.91
PNKP-211ENST00000598020 CAMKK2Q96RR4 588 aa26.98■■□□□ 1.91
PNKP-211ENST00000598020 MRS2Q9HD23 443 aa26.98■■□□□ 1.91
PNKP-211ENST00000598020 ADAMTS7Q9UKP4 1686 aa26.98■■□□□ 1.91
PNKP-211ENST00000598020 SCN11AQ9UI33 1791 aa26.97■■□□□ 1.91
PNKP-211ENST00000598020 MPRIPQ6WCQ1 1025 aa26.97■■□□□ 1.91
PNKP-211ENST00000598020 PNISRQ8TF01 805 aaKnown RBP26.97■■□□□ 1.91
PNKP-211ENST00000598020 SYTL4Q96C24 671 aaPredicted RBP26.97■■□□□ 1.91
PNKP-211ENST00000598020 MAP3K5Q99683 1374 aa26.97■■□□□ 1.91
PNKP-211ENST00000598020 GNAT3A8MTJ3 354 aa26.96■■□□□ 1.91
PNKP-211ENST00000598020 EN1Q05925 392 aaPredicted RBP26.96■■□□□ 1.91
PNKP-211ENST00000598020 MAPK8IP3Q9UPT6 1336 aa26.94■■□□□ 1.9
PNKP-211ENST00000598020 RNMTO43148 476 aaKnown RBP26.94■■□□□ 1.9
PNKP-211ENST00000598020 VIRMAQ69YN4 1812 aaKnown RBP26.93■■□□□ 1.9
PNKP-211ENST00000598020 HTATSF1O43719 755 aaKnown RBP26.93■■□□□ 1.9
PNKP-211ENST00000598020 PIGBQ92521 554 aa26.93■■□□□ 1.9
PNKP-211ENST00000598020 TMOD3Q9NYL9 352 aa26.93■■□□□ 1.9
PNKP-211ENST00000598020 RUNDC1Q96C34 613 aa26.92■■□□□ 1.9
PNKP-211ENST00000598020 LGR6Q9HBX8 967 aa26.92■■□□□ 1.9
PNKP-211ENST00000598020 EZH2Q15910 746 aaKnown RBP26.91■■□□□ 1.9
PNKP-211ENST00000598020 NFE2L2Q16236 605 aa26.91■■□□□ 1.9
PNKP-211ENST00000598020 MRC1P22897 1456 aa26.91■■□□□ 1.9
PNKP-211ENST00000598020 CABP4P57796 275 aa26.9■■□□□ 1.9
PNKP-211ENST00000598020 IL17REQ8NFR9 667 aa26.9■■□□□ 1.9
PNKP-211ENST00000598020 CEMIPQ8WUJ3 1361 aa26.89■■□□□ 1.9
PNKP-211ENST00000598020 DLG5Q8TDM6 1919 aa26.88■■□□□ 1.89
PNKP-211ENST00000598020 CCER2I3L3R5 266 aa26.88■■□□□ 1.89
PNKP-211ENST00000598020 PROM2Q8N271 834 aa26.88■■□□□ 1.89
PNKP-211ENST00000598020 SMARCC1Q92922 1105 aaPredicted RBP26.88■■□□□ 1.89
PNKP-211ENST00000598020 SLC52A2Q9HAB3 445 aa26.88■■□□□ 1.89
PNKP-211ENST00000598020 RREB1Q92766 1687 aa26.88■■□□□ 1.89
PNKP-211ENST00000598020 CCDC146Q8IYE0 955 aa26.87■■□□□ 1.89
PNKP-211ENST00000598020 NFATC2IPQ8NCF5 419 aa26.87■■□□□ 1.89
PNKP-211ENST00000598020 LY75O60449 1722 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms