RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 AKT1S1Q96B36 256 aa23.77■■□□□ 1.4
PNKP-210ENST00000597965 PRIM1P49642 420 aaKnown RBP23.76■■□□□ 1.39
PNKP-210ENST00000597965 TFCP2L1Q9NZI6 479 aa23.76■■□□□ 1.39
PNKP-210ENST00000597965 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
PNKP-210ENST00000597965 FYB1O15117 783 aa23.74■■□□□ 1.39
PNKP-210ENST00000597965 KIF24Q5T7B8 1368 aa23.74■■□□□ 1.39
PNKP-210ENST00000597965 USP47Q96K76 1375 aa23.74■■□□□ 1.39
PNKP-210ENST00000597965 UTRNP46939 3433 aa23.74■■□□□ 1.39
PNKP-210ENST00000597965 DOT1LQ8TEK3 1739 aa23.73■■□□□ 1.39
PNKP-210ENST00000597965 CHD4Q14839 1912 aa23.72■■□□□ 1.39
PNKP-210ENST00000597965 MEGF6O75095 1541 aa23.71■■□□□ 1.39
PNKP-210ENST00000597965 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
PNKP-210ENST00000597965 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
PNKP-210ENST00000597965 RGPD2P0DJD1 1756 aa23.7■■□□□ 1.39
PNKP-210ENST00000597965 LY75O60449 1722 aa23.7■■□□□ 1.39
PNKP-210ENST00000597965 TATP17735 454 aaPredicted RBP23.7■■□□□ 1.38
PNKP-210ENST00000597965 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
PNKP-210ENST00000597965 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
PNKP-210ENST00000597965 CCNL1Q9UK58 526 aaPredicted RBP23.7■■□□□ 1.38
PNKP-210ENST00000597965 INSRP06213 1382 aa23.69■■□□□ 1.38
PNKP-210ENST00000597965 PNPLA7Q6ZV29 1317 aa23.69■■□□□ 1.38
PNKP-210ENST00000597965 FBLN1P23142 703 aa23.69■■□□□ 1.38
PNKP-210ENST00000597965 FLT4P35916 1363 aa23.68■■□□□ 1.38
PNKP-210ENST00000597965 SHANK3Q9BYB0 1731 aa23.68■■□□□ 1.38
PNKP-210ENST00000597965 PCDH11XQ9BZA7 1347 aa23.68■■□□□ 1.38
PNKP-210ENST00000597965 PCDH11YQ9BZA8 1340 aa23.68■■□□□ 1.38
PNKP-210ENST00000597965 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
PNKP-210ENST00000597965 ZNF784Q8NCA9 323 aaPredicted RBP23.68■■□□□ 1.38
PNKP-210ENST00000597965 NSD2O96028 1365 aa23.67■■□□□ 1.38
PNKP-210ENST00000597965 GPR162Q16538 588 aa23.67■■□□□ 1.38
PNKP-210ENST00000597965 KIF20BQ96Q89 1820 aa23.67■■□□□ 1.38
PNKP-210ENST00000597965 COL24A1Q17RW2 1714 aa23.65■■□□□ 1.38
PNKP-210ENST00000597965 KLHL34Q8N239 644 aa23.64■■□□□ 1.37
PNKP-210ENST00000597965 TIMELESSQ9UNS1 1208 aa23.64■■□□□ 1.37
PNKP-210ENST00000597965 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
PNKP-210ENST00000597965 USHBP1Q8N6Y0 703 aa23.63■■□□□ 1.37
PNKP-210ENST00000597965 KCNQ4P56696 695 aa23.62■■□□□ 1.37
PNKP-210ENST00000597965 FLAD1Q8NFF5 587 aa23.62■■□□□ 1.37
PNKP-210ENST00000597965 TUBGCP6Q96RT7 1819 aa23.61■■□□□ 1.37
PNKP-210ENST00000597965 MSH5O43196 834 aa23.61■■□□□ 1.37
PNKP-210ENST00000597965 SMARCC1Q92922 1105 aaPredicted RBP23.59■■□□□ 1.37
PNKP-210ENST00000597965 MPRIPQ6WCQ1 1025 aa23.57■■□□□ 1.36
PNKP-210ENST00000597965 NSD3Q9BZ95 1437 aa23.57■■□□□ 1.36
PNKP-210ENST00000597965 PALLDQ8WX93 1383 aa23.56■■□□□ 1.36
PNKP-210ENST00000597965 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
PNKP-210ENST00000597965 COL23A1Q86Y22 540 aaPredicted RBP23.56■■□□□ 1.36
PNKP-210ENST00000597965 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
PNKP-210ENST00000597965 SPG7Q9UQ90 795 aa23.56■■□□□ 1.36
PNKP-210ENST00000597965 C5P01031 1676 aa23.56■■□□□ 1.36
PNKP-210ENST00000597965 PPM1GO15355 546 aaPredicted RBP23.54■■□□□ 1.36
PNKP-210ENST00000597965 CARD14Q9BXL6 1004 aa23.54■■□□□ 1.36
PNKP-210ENST00000597965 CYP27B1O15528 508 aa23.53■■□□□ 1.36
PNKP-210ENST00000597965 EMILIN1Q9Y6C2 1016 aa23.53■■□□□ 1.36
PNKP-210ENST00000597965 CLSPNQ9HAW4 1339 aa23.53■■□□□ 1.36
PNKP-210ENST00000597965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
PNKP-210ENST00000597965 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
PNKP-210ENST00000597965 WASHC2AQ641Q2 1341 aa23.52■■□□□ 1.36
PNKP-210ENST00000597965 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
PNKP-210ENST00000597965 AK7Q96M32 723 aa23.51■■□□□ 1.35
PNKP-210ENST00000597965 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
PNKP-210ENST00000597965 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
PNKP-210ENST00000597965 TAF1LQ8IZX4 1826 aa23.5■■□□□ 1.35
PNKP-210ENST00000597965 NLGN2Q8NFZ4 835 aa23.5■■□□□ 1.35
PNKP-210ENST00000597965 CD2APQ9Y5K6 639 aa23.5■■□□□ 1.35
PNKP-210ENST00000597965 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
PNKP-210ENST00000597965 C1QTNF8P60827 252 aa23.49■■□□□ 1.35
PNKP-210ENST00000597965 ITGB4P16144 1822 aa23.49■■□□□ 1.35
PNKP-210ENST00000597965 PLEKHG2Q9H7P9 1386 aa23.48■■□□□ 1.35
PNKP-210ENST00000597965 MAP2P11137 1827 aaKnown RBP23.47■■□□□ 1.35
PNKP-210ENST00000597965 C4BP0C0L5 1744 aa23.46■■□□□ 1.35
PNKP-210ENST00000597965 MSL1Q68DK7 614 aa23.46■■□□□ 1.35
PNKP-210ENST00000597965 TMOD3Q9NYL9 352 aa23.46■■□□□ 1.35
PNKP-210ENST00000597965 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
PNKP-210ENST00000597965 IFNL2Q8IZJ0 200 aa23.45■■□□□ 1.34
PNKP-210ENST00000597965 PIGBQ92521 554 aa23.45■■□□□ 1.34
PNKP-210ENST00000597965 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
PNKP-210ENST00000597965 SSFA2P28290 1259 aa23.44■■□□□ 1.34
PNKP-210ENST00000597965 EYA1Q99502 592 aa23.44■■□□□ 1.34
PNKP-210ENST00000597965 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
PNKP-210ENST00000597965 LOC102724428A0A0B4J2F2 783 aa23.42■■□□□ 1.34
PNKP-210ENST00000597965 SIK1P57059 783 aa23.42■■□□□ 1.34
PNKP-210ENST00000597965 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
PNKP-210ENST00000597965 YBX3P16989 372 aaKnown RBP eCLIP23.41■■□□□ 1.34
PNKP-210ENST00000597965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.4■■□□□ 1.34
PNKP-210ENST00000597965 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
PNKP-210ENST00000597965 UBR3Q6ZT12 1888 aa23.39■■□□□ 1.34
PNKP-210ENST00000597965 PHF14O94880 888 aa23.39■■□□□ 1.33
PNKP-210ENST00000597965 PHKG2P15735 406 aa23.39■■□□□ 1.33
PNKP-210ENST00000597965 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
PNKP-210ENST00000597965 ATP6V1AP38606 617 aa23.37■■□□□ 1.33
PNKP-210ENST00000597965 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
PNKP-210ENST00000597965 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
PNKP-210ENST00000597965 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
PNKP-210ENST00000597965 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
PNKP-210ENST00000597965 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
PNKP-210ENST00000597965 GNPATO15228 680 aa23.34■■□□□ 1.33
PNKP-210ENST00000597965 LINC00116Q8NCU8 138 aa23.34■■□□□ 1.33
PNKP-210ENST00000597965 DCAF5Q96JK2 942 aa23.33■■□□□ 1.33
PNKP-210ENST00000597965 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
PNKP-210ENST00000597965 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms