RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
SH2D3A-207ENST00000597687 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
SH2D3A-207ENST00000597687 USP47Q96K76 1375 aa20.46■□□□□ 0.87
SH2D3A-207ENST00000597687 GPR162Q16538 588 aa20.46■□□□□ 0.87
SH2D3A-207ENST00000597687 ZNF827Q17R98 1081 aa20.46■□□□□ 0.87
SH2D3A-207ENST00000597687 LY75O60449 1722 aa20.44■□□□□ 0.86
SH2D3A-207ENST00000597687 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
SH2D3A-207ENST00000597687 MSH5O43196 834 aa20.43■□□□□ 0.86
SH2D3A-207ENST00000597687 SGIP1Q9BQI5 828 aa20.43■□□□□ 0.86
SH2D3A-207ENST00000597687 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
SH2D3A-207ENST00000597687 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 TESK2Q96S53 571 aa20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 MEGF6O75095 1541 aa20.42■□□□□ 0.86
SH2D3A-207ENST00000597687 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
SH2D3A-207ENST00000597687 ZNF784Q8NCA9 323 aaPredicted RBP20.41■□□□□ 0.86
SH2D3A-207ENST00000597687 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
SH2D3A-207ENST00000597687 LRRC4BQ9NT99 713 aa20.41■□□□□ 0.86
SH2D3A-207ENST00000597687 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
SH2D3A-207ENST00000597687 FLT4P35916 1363 aa20.4■□□□□ 0.86
SH2D3A-207ENST00000597687 KIF24Q5T7B8 1368 aa20.4■□□□□ 0.86
SH2D3A-207ENST00000597687 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.85
SH2D3A-207ENST00000597687 RRS1Q15050 365 aaKnown RBP20.39■□□□□ 0.85
SH2D3A-207ENST00000597687 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
SH2D3A-207ENST00000597687 UTRNP46939 3433 aa20.38■□□□□ 0.85
SH2D3A-207ENST00000597687 C5P01031 1676 aa20.37■□□□□ 0.85
SH2D3A-207ENST00000597687 FLAD1Q8NFF5 587 aa20.36■□□□□ 0.85
SH2D3A-207ENST00000597687 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
SH2D3A-207ENST00000597687 INSRP06213 1382 aa20.35■□□□□ 0.85
SH2D3A-207ENST00000597687 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
SH2D3A-207ENST00000597687 USHBP1Q8N6Y0 703 aa20.34■□□□□ 0.85
SH2D3A-207ENST00000597687 NSD2O96028 1365 aa20.34■□□□□ 0.85
SH2D3A-207ENST00000597687 FYB1O15117 783 aa20.33■□□□□ 0.85
SH2D3A-207ENST00000597687 GRIN3BO60391 1043 aa20.33■□□□□ 0.85
SH2D3A-207ENST00000597687 NBPF6Q5VWK0 638 aa20.33■□□□□ 0.85
SH2D3A-207ENST00000597687 NBPF4Q96M43 638 aa20.33■□□□□ 0.85
SH2D3A-207ENST00000597687 SMARCC1Q92922 1105 aaPredicted RBP20.32■□□□□ 0.84
SH2D3A-207ENST00000597687 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
SH2D3A-207ENST00000597687 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
SH2D3A-207ENST00000597687 KCNQ4P56696 695 aa20.31■□□□□ 0.84
SH2D3A-207ENST00000597687 GIGYF1O75420 1035 aaPredicted RBP20.3■□□□□ 0.84
SH2D3A-207ENST00000597687 FBLN1P23142 703 aa20.3■□□□□ 0.84
SH2D3A-207ENST00000597687 AK7Q96M32 723 aa20.3■□□□□ 0.84
SH2D3A-207ENST00000597687 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
SH2D3A-207ENST00000597687 MPRIPQ6WCQ1 1025 aa20.29■□□□□ 0.84
SH2D3A-207ENST00000597687 SPG7Q9UQ90 795 aa20.29■□□□□ 0.84
SH2D3A-207ENST00000597687 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
SH2D3A-207ENST00000597687 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
SH2D3A-207ENST00000597687 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
SH2D3A-207ENST00000597687 ITGB4P16144 1822 aa20.26■□□□□ 0.83
SH2D3A-207ENST00000597687 C1QTNF8P60827 252 aa20.26■□□□□ 0.83
SH2D3A-207ENST00000597687 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
SH2D3A-207ENST00000597687 C4BP0C0L5 1744 aa20.25■□□□□ 0.83
SH2D3A-207ENST00000597687 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
SH2D3A-207ENST00000597687 COL23A1Q86Y22 540 aaPredicted RBP20.25■□□□□ 0.83
SH2D3A-207ENST00000597687 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
SH2D3A-207ENST00000597687 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
SH2D3A-207ENST00000597687 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
SH2D3A-207ENST00000597687 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
SH2D3A-207ENST00000597687 GOLGB1Q14789 3259 aaKnown RBP20.22■□□□□ 0.83
SH2D3A-207ENST00000597687 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
SH2D3A-207ENST00000597687 TIMELESSQ9UNS1 1208 aa20.22■□□□□ 0.83
SH2D3A-207ENST00000597687 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
SH2D3A-207ENST00000597687 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
SH2D3A-207ENST00000597687 EMILIN1Q9Y6C2 1016 aa20.21■□□□□ 0.83
SH2D3A-207ENST00000597687 PHF14O94880 888 aa20.19■□□□□ 0.82
SH2D3A-207ENST00000597687 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SH2D3A-207ENST00000597687 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
SH2D3A-207ENST00000597687 CYP27B1O15528 508 aa20.18■□□□□ 0.82
SH2D3A-207ENST00000597687 SSFA2P28290 1259 aa20.18■□□□□ 0.82
SH2D3A-207ENST00000597687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
SH2D3A-207ENST00000597687 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
SH2D3A-207ENST00000597687 WASHC2AQ641Q2 1341 aa20.17■□□□□ 0.82
SH2D3A-207ENST00000597687 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
SH2D3A-207ENST00000597687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
SH2D3A-207ENST00000597687 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
SH2D3A-207ENST00000597687 SIK1P57059 783 aa20.15■□□□□ 0.82
SH2D3A-207ENST00000597687 CLSPNQ9HAW4 1339 aa20.15■□□□□ 0.82
SH2D3A-207ENST00000597687 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
SH2D3A-207ENST00000597687 YBX3P16989 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
SH2D3A-207ENST00000597687 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
SH2D3A-207ENST00000597687 PIGBQ92521 554 aa20.14■□□□□ 0.81
SH2D3A-207ENST00000597687 GPBP1L1Q9HC44 474 aaPredicted RBP20.14■□□□□ 0.81
SH2D3A-207ENST00000597687 GNPATO15228 680 aa20.13■□□□□ 0.81
SH2D3A-207ENST00000597687 CARD14Q9BXL6 1004 aa20.13■□□□□ 0.81
SH2D3A-207ENST00000597687 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
SH2D3A-207ENST00000597687 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
SH2D3A-207ENST00000597687 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
SH2D3A-207ENST00000597687 EYA1Q99502 592 aa20.11■□□□□ 0.81
SH2D3A-207ENST00000597687 PHKG2P15735 406 aa20.1■□□□□ 0.81
SH2D3A-207ENST00000597687 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
SH2D3A-207ENST00000597687 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.81
SH2D3A-207ENST00000597687 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
SH2D3A-207ENST00000597687 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
SH2D3A-207ENST00000597687 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
SH2D3A-207ENST00000597687 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
SH2D3A-207ENST00000597687 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms