RNA–Protein interactions for RNA: ENST00000597576.1

ZNF548-208, Transcript of zinc finger protein 548, humanhuman

TSL 2

Gene ZNF548, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-208ENST00000597576 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
ZNF548-208ENST00000597576 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
ZNF548-208ENST00000597576 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
ZNF548-208ENST00000597576 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
ZNF548-208ENST00000597576 NLRP13Q86W25 1043 aa11.07□□□□□ -0.64
ZNF548-208ENST00000597576 TFCP2L1Q9NZI6 479 aa11.07□□□□□ -0.64
ZNF548-208ENST00000597576 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
ZNF548-208ENST00000597576 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
ZNF548-208ENST00000597576 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
ZNF548-208ENST00000597576 SBF1O95248 1867 aa11.06□□□□□ -0.64
ZNF548-208ENST00000597576 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
ZNF548-208ENST00000597576 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
ZNF548-208ENST00000597576 CCDC7Q96M83 1385 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 NFAT5O94916 1531 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 KCNQ4P56696 695 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 FSTL1Q12841 308 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 C10orf71Q711Q0 1435 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
ZNF548-208ENST00000597576 NSD2O96028 1365 aa11.04□□□□□ -0.64
ZNF548-208ENST00000597576 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
ZNF548-208ENST00000597576 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
ZNF548-208ENST00000597576 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
ZNF548-208ENST00000597576 LTN1O94822 1766 aa11.03□□□□□ -0.64
ZNF548-208ENST00000597576 PXDNLA1KZ92 1463 aa11.02□□□□□ -0.65
ZNF548-208ENST00000597576 CDK19Q9BWU1 502 aa11.02□□□□□ -0.65
ZNF548-208ENST00000597576 ZEB1P37275 1124 aaPredicted RBP11.01□□□□□ -0.65
ZNF548-208ENST00000597576 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
ZNF548-208ENST00000597576 ZBTB7CA1YPR0 619 aa11□□□□□ -0.65
ZNF548-208ENST00000597576 KCPQ6ZWJ8 1503 aa10.99□□□□□ -0.65
ZNF548-208ENST00000597576 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
ZNF548-208ENST00000597576 NLRP6P59044 892 aa10.98□□□□□ -0.65
ZNF548-208ENST00000597576 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
ZNF548-208ENST00000597576 VIRMAQ69YN4 1812 aaKnown RBP10.97□□□□□ -0.65
ZNF548-208ENST00000597576 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
ZNF548-208ENST00000597576 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
ZNF548-208ENST00000597576 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
ZNF548-208ENST00000597576 PLEKHG2Q9H7P9 1386 aa10.95□□□□□ -0.66
ZNF548-208ENST00000597576 ERBB3P21860 1342 aa10.95□□□□□ -0.66
ZNF548-208ENST00000597576 CSB-PGBD3P0DP91 1061 aa10.95□□□□□ -0.66
ZNF548-208ENST00000597576 IL2RBP14784 551 aa10.95□□□□□ -0.66
ZNF548-208ENST00000597576 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
ZNF548-208ENST00000597576 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
ZNF548-208ENST00000597576 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
ZNF548-208ENST00000597576 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
ZNF548-208ENST00000597576 CCNL1Q9UK58 526 aaPredicted RBP10.94□□□□□ -0.66
ZNF548-208ENST00000597576 RGPD2P0DJD1 1756 aa10.93□□□□□ -0.66
ZNF548-208ENST00000597576 RGS19P49795 217 aa10.93□□□□□ -0.66
ZNF548-208ENST00000597576 SMC1BQ8NDV3 1235 aa10.93□□□□□ -0.66
ZNF548-208ENST00000597576 ITGB4P16144 1822 aa10.93□□□□□ -0.66
ZNF548-208ENST00000597576 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
ZNF548-208ENST00000597576 FOXN1O15353 648 aa10.92□□□□□ -0.66
ZNF548-208ENST00000597576 C16orf71Q8IYS4 520 aaPredicted RBP10.92□□□□□ -0.66
ZNF548-208ENST00000597576 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
ZNF548-208ENST00000597576 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
ZNF548-208ENST00000597576 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
ZNF548-208ENST00000597576 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.66
ZNF548-208ENST00000597576 ABHD8Q96I13 439 aa10.9□□□□□ -0.66
ZNF548-208ENST00000597576 RRAGCQ9HB90 399 aa10.9□□□□□ -0.66
ZNF548-208ENST00000597576 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
ZNF548-208ENST00000597576 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
ZNF548-208ENST00000597576 C9orf131Q5VYM1 1079 aa10.89□□□□□ -0.67
ZNF548-208ENST00000597576 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
ZNF548-208ENST00000597576 CENPJQ9HC77 1338 aaPredicted RBP10.88□□□□□ -0.67
ZNF548-208ENST00000597576 NBPF1Q3BBV0 1214 aa10.88□□□□□ -0.67
ZNF548-208ENST00000597576 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
ZNF548-208ENST00000597576 NLRP2Q9NX02 1062 aa10.88□□□□□ -0.67
ZNF548-208ENST00000597576 C4AP0C0L4 1744 aa10.87□□□□□ -0.67
ZNF548-208ENST00000597576 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
ZNF548-208ENST00000597576 SYTL4Q96C24 671 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-208ENST00000597576 CABP1Q9NZU7 370 aa10.87□□□□□ -0.67
ZNF548-208ENST00000597576 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
ZNF548-208ENST00000597576 KDM6AO15550 1401 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-208ENST00000597576 SOX12O15370 315 aa10.86□□□□□ -0.67
ZNF548-208ENST00000597576 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
ZNF548-208ENST00000597576 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
ZNF548-208ENST00000597576 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
ZNF548-208ENST00000597576 USP47Q96K76 1375 aa10.86□□□□□ -0.67
ZNF548-208ENST00000597576 TTC21BQ7Z4L5 1316 aa10.85□□□□□ -0.67
ZNF548-208ENST00000597576 TGFB2P61812 414 aa10.85□□□□□ -0.67
ZNF548-208ENST00000597576 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
ZNF548-208ENST00000597576 MEGF6O75095 1541 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
ZNF548-208ENST00000597576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.84□□□□□ -0.67
ZNF548-208ENST00000597576 A0A0G2JLW4 131 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 KCNA3P22001 575 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
ZNF548-208ENST00000597576 SBNO2Q9Y2G9 1366 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 NSD3Q9BZ95 1437 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
ZNF548-208ENST00000597576 CNTNAP1P78357 1384 aa10.83□□□□□ -0.68
ZNF548-208ENST00000597576 SRPK2P78362 688 aaKnown RBP10.83□□□□□ -0.68
ZNF548-208ENST00000597576 ANKRD24Q8TF21 1146 aa10.83□□□□□ -0.68
ZNF548-208ENST00000597576 TTC21AQ8NDW8 1320 aa10.83□□□□□ -0.68
ZNF548-208ENST00000597576 USP31Q70CQ4 1352 aa10.82□□□□□ -0.68
ZNF548-208ENST00000597576 PALLDQ8WX93 1383 aa10.82□□□□□ -0.68
ZNF548-208ENST00000597576 DPEP1P16444 411 aa10.82□□□□□ -0.68
ZNF548-208ENST00000597576 DCAF5Q96JK2 942 aa10.82□□□□□ -0.68
ZNF548-208ENST00000597576 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms