RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 AMPHP49418 695 aa18.42■□□□□ 0.54
PRKD2-208ENST00000597390 NUP188Q5SRE5 1749 aa18.41■□□□□ 0.54
PRKD2-208ENST00000597390 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
PRKD2-208ENST00000597390 INSRP06213 1382 aa18.4■□□□□ 0.54
PRKD2-208ENST00000597390 LTV1Q96GA3 475 aaPredicted RBP18.4■□□□□ 0.54
PRKD2-208ENST00000597390 FLT4P35916 1363 aa18.39■□□□□ 0.53
PRKD2-208ENST00000597390 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
PRKD2-208ENST00000597390 YY1P25490 414 aa18.39■□□□□ 0.53
PRKD2-208ENST00000597390 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
PRKD2-208ENST00000597390 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
PRKD2-208ENST00000597390 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
PRKD2-208ENST00000597390 HSP90AB2PQ58FF8 381 aa18.38■□□□□ 0.53
PRKD2-208ENST00000597390 PLSCR1O15162 318 aa18.37■□□□□ 0.53
PRKD2-208ENST00000597390 R3HDM1Q15032 1099 aaKnown RBP18.36■□□□□ 0.53
PRKD2-208ENST00000597390 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
PRKD2-208ENST00000597390 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
PRKD2-208ENST00000597390 CCER2I3L3R5 266 aa18.33■□□□□ 0.53
PRKD2-208ENST00000597390 NBPF14Q5TI25 921 aa18.33■□□□□ 0.53
PRKD2-208ENST00000597390 IL13P35225 146 aa18.31■□□□□ 0.52
PRKD2-208ENST00000597390 EIF4A2Q14240 407 aaKnown RBP18.31■□□□□ 0.52
PRKD2-208ENST00000597390 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
PRKD2-208ENST00000597390 NBPF6Q5VWK0 638 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 NBPF4Q96M43 638 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 KCNQ2O43526 872 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
PRKD2-208ENST00000597390 MRS2Q9HD23 443 aa18.3■□□□□ 0.52
PRKD2-208ENST00000597390 MEGF6O75095 1541 aa18.29■□□□□ 0.52
PRKD2-208ENST00000597390 ACSBG1Q96GR2 724 aa18.29■□□□□ 0.52
PRKD2-208ENST00000597390 BTAF1O14981 1849 aa18.28■□□□□ 0.52
PRKD2-208ENST00000597390 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
PRKD2-208ENST00000597390 PROM2Q8N271 834 aa18.27■□□□□ 0.51
PRKD2-208ENST00000597390 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.51
PRKD2-208ENST00000597390 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.51
PRKD2-208ENST00000597390 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
PRKD2-208ENST00000597390 USHBP1Q8N6Y0 703 aa18.26■□□□□ 0.51
PRKD2-208ENST00000597390 TXNRD1Q16881 649 aa18.25■□□□□ 0.51
PRKD2-208ENST00000597390 RAPGEF4Q8WZA2 1011 aa18.25■□□□□ 0.51
PRKD2-208ENST00000597390 EYA1Q99502 592 aa18.25■□□□□ 0.51
PRKD2-208ENST00000597390 IGSF1Q8N6C5 1336 aa18.25■□□□□ 0.51
PRKD2-208ENST00000597390 DOT1LQ8TEK3 1739 aa18.24■□□□□ 0.51
PRKD2-208ENST00000597390 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
PRKD2-208ENST00000597390 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
PRKD2-208ENST00000597390 ANO8Q9HCE9 1232 aaPredicted RBP18.22■□□□□ 0.51
PRKD2-208ENST00000597390 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
PRKD2-208ENST00000597390 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
PRKD2-208ENST00000597390 KDRP35968 1356 aa18.21■□□□□ 0.51
PRKD2-208ENST00000597390 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
PRKD2-208ENST00000597390 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
PRKD2-208ENST00000597390 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
PRKD2-208ENST00000597390 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
PRKD2-208ENST00000597390 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
PRKD2-208ENST00000597390 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRKD2-208ENST00000597390 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
PRKD2-208ENST00000597390 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
PRKD2-208ENST00000597390 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
PRKD2-208ENST00000597390 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRKD2-208ENST00000597390 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
PRKD2-208ENST00000597390 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
PRKD2-208ENST00000597390 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
PRKD2-208ENST00000597390 HMOX1P09601 288 aa18.17■□□□□ 0.5
PRKD2-208ENST00000597390 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
PRKD2-208ENST00000597390 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
PRKD2-208ENST00000597390 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
PRKD2-208ENST00000597390 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
PRKD2-208ENST00000597390 LY75O60449 1722 aa18.16■□□□□ 0.5
PRKD2-208ENST00000597390 FCHSD2O94868 740 aa18.16■□□□□ 0.5
PRKD2-208ENST00000597390 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
PRKD2-208ENST00000597390 SPON1Q9HCB6 807 aa18.16■□□□□ 0.5
PRKD2-208ENST00000597390 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
PRKD2-208ENST00000597390 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
PRKD2-208ENST00000597390 CYP27B1O15528 508 aa18.13■□□□□ 0.49
PRKD2-208ENST00000597390 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
PRKD2-208ENST00000597390 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
PRKD2-208ENST00000597390 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
PRKD2-208ENST00000597390 ITGB4P16144 1822 aa18.12■□□□□ 0.49
PRKD2-208ENST00000597390 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
PRKD2-208ENST00000597390 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
PRKD2-208ENST00000597390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
PRKD2-208ENST00000597390 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
PRKD2-208ENST00000597390 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
PRKD2-208ENST00000597390 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
PRKD2-208ENST00000597390 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
PRKD2-208ENST00000597390 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
PRKD2-208ENST00000597390 PPP1R1BQ9UD71 204 aaPredicted RBP18.09■□□□□ 0.49
PRKD2-208ENST00000597390 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.49
PRKD2-208ENST00000597390 ZNF827Q17R98 1081 aa18.08■□□□□ 0.49
PRKD2-208ENST00000597390 RUNDC1Q96C34 613 aa18.08■□□□□ 0.49
PRKD2-208ENST00000597390 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.49
PRKD2-208ENST00000597390 ZBTB7AO95365 584 aa18.07■□□□□ 0.48
PRKD2-208ENST00000597390 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
PRKD2-208ENST00000597390 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
PRKD2-208ENST00000597390 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
PRKD2-208ENST00000597390 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
PRKD2-208ENST00000597390 CCNL1Q9UK58 526 aaPredicted RBP18.06■□□□□ 0.48
PRKD2-208ENST00000597390 PHKG2P15735 406 aa18.05■□□□□ 0.48
PRKD2-208ENST00000597390 KCNQ4P56696 695 aa18.05■□□□□ 0.48
PRKD2-208ENST00000597390 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
PRKD2-208ENST00000597390 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms