RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
ZNF548-206ENST00000597047 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
ZNF548-206ENST00000597047 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
ZNF548-206ENST00000597047 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
ZNF548-206ENST00000597047 SPG7Q9UQ90 795 aa12.35□□□□□ -0.43
ZNF548-206ENST00000597047 MEGF6O75095 1541 aa12.35□□□□□ -0.43
ZNF548-206ENST00000597047 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
ZNF548-206ENST00000597047 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
ZNF548-206ENST00000597047 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
ZNF548-206ENST00000597047 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
ZNF548-206ENST00000597047 KRT27Q7Z3Y8 459 aa12.34□□□□□ -0.43
ZNF548-206ENST00000597047 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
ZNF548-206ENST00000597047 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 FCHSD2O94868 740 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
ZNF548-206ENST00000597047 RGS12O14924 1447 aa12.33□□□□□ -0.44
ZNF548-206ENST00000597047 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
ZNF548-206ENST00000597047 RGPD1P0DJD0 1748 aa12.32□□□□□ -0.44
ZNF548-206ENST00000597047 CCER2I3L3R5 266 aa12.32□□□□□ -0.44
ZNF548-206ENST00000597047 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
ZNF548-206ENST00000597047 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
ZNF548-206ENST00000597047 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
ZNF548-206ENST00000597047 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
ZNF548-206ENST00000597047 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
ZNF548-206ENST00000597047 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
ZNF548-206ENST00000597047 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
ZNF548-206ENST00000597047 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-206ENST00000597047 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
ZNF548-206ENST00000597047 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
ZNF548-206ENST00000597047 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
ZNF548-206ENST00000597047 RUNDC1Q96C34 613 aa12.3□□□□□ -0.44
ZNF548-206ENST00000597047 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 CYP27B1O15528 508 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 KDRP35968 1356 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 THSD7AQ9UPZ6 1657 aa12.29□□□□□ -0.44
ZNF548-206ENST00000597047 PHKG2P15735 406 aa12.28□□□□□ -0.44
ZNF548-206ENST00000597047 GAS2L2Q8NHY3 880 aa12.28□□□□□ -0.44
ZNF548-206ENST00000597047 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
ZNF548-206ENST00000597047 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
ZNF548-206ENST00000597047 APAF1O14727 1248 aa12.27□□□□□ -0.45
ZNF548-206ENST00000597047 RIPK4P57078 832 aa12.27□□□□□ -0.45
ZNF548-206ENST00000597047 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
ZNF548-206ENST00000597047 PLEKHF1Q96S99 279 aa12.27□□□□□ -0.45
ZNF548-206ENST00000597047 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
ZNF548-206ENST00000597047 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 TRIM37O94972 964 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 MCM10Q7L590 875 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
ZNF548-206ENST00000597047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
ZNF548-206ENST00000597047 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
ZNF548-206ENST00000597047 KCNQ2O43526 872 aa12.24□□□□□ -0.45
ZNF548-206ENST00000597047 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
ZNF548-206ENST00000597047 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
ZNF548-206ENST00000597047 CABP4P57796 275 aa12.24□□□□□ -0.45
ZNF548-206ENST00000597047 SF3B2Q13435 895 aaKnown RBP12.24□□□□□ -0.45
ZNF548-206ENST00000597047 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
ZNF548-206ENST00000597047 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
ZNF548-206ENST00000597047 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
ZNF548-206ENST00000597047 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
ZNF548-206ENST00000597047 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
ZNF548-206ENST00000597047 RNMTO43148 476 aaKnown RBP12.23□□□□□ -0.45
ZNF548-206ENST00000597047 TEFQ10587 303 aa12.23□□□□□ -0.45
ZNF548-206ENST00000597047 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
ZNF548-206ENST00000597047 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF548-206ENST00000597047 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
ZNF548-206ENST00000597047 YTHDC1Q96MU7 727 aaKnown RBP12.23□□□□□ -0.45
ZNF548-206ENST00000597047 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
ZNF548-206ENST00000597047 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
ZNF548-206ENST00000597047 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
ZNF548-206ENST00000597047 APBA3O96018 575 aa12.21□□□□□ -0.45
ZNF548-206ENST00000597047 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
ZNF548-206ENST00000597047 DOT1LQ8TEK3 1739 aa12.2□□□□□ -0.46
ZNF548-206ENST00000597047 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
ZNF548-206ENST00000597047 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
ZNF548-206ENST00000597047 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
ZNF548-206ENST00000597047 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
ZNF548-206ENST00000597047 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZNF548-206ENST00000597047 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 PIGBQ92521 554 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
ZNF548-206ENST00000597047 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-206ENST00000597047 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 KDM6AO15550 1401 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-206ENST00000597047 ITGB4P16144 1822 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
ZNF548-206ENST00000597047 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
ZNF548-206ENST00000597047 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
ZNF548-206ENST00000597047 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms