RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
SYMPK-207ENST00000596824 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
SYMPK-207ENST00000596824 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
SYMPK-207ENST00000596824 PANK3Q9H999 370 aa16.1■□□□□ 0.17
SYMPK-207ENST00000596824 KCNQ2O43526 872 aa16.09■□□□□ 0.17
SYMPK-207ENST00000596824 USHBP1Q8N6Y0 703 aa16.09■□□□□ 0.17
SYMPK-207ENST00000596824 NSD2O96028 1365 aa16.09■□□□□ 0.17
SYMPK-207ENST00000596824 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
SYMPK-207ENST00000596824 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.16
SYMPK-207ENST00000596824 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
SYMPK-207ENST00000596824 NBPF14Q5TI25 921 aa16.07■□□□□ 0.16
SYMPK-207ENST00000596824 KIF7Q2M1P5 1343 aa16.07■□□□□ 0.16
SYMPK-207ENST00000596824 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
SYMPK-207ENST00000596824 PROM2Q8N271 834 aa16.06■□□□□ 0.16
SYMPK-207ENST00000596824 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
SYMPK-207ENST00000596824 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
SYMPK-207ENST00000596824 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
SYMPK-207ENST00000596824 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
SYMPK-207ENST00000596824 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SYMPK-207ENST00000596824 TXNRD1Q16881 649 aa16.04■□□□□ 0.16
SYMPK-207ENST00000596824 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
SYMPK-207ENST00000596824 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
SYMPK-207ENST00000596824 C5P01031 1676 aa16.04■□□□□ 0.16
SYMPK-207ENST00000596824 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
SYMPK-207ENST00000596824 TATP17735 454 aaPredicted RBP16.02■□□□□ 0.16
SYMPK-207ENST00000596824 COL24A1Q17RW2 1714 aa16.01■□□□□ 0.15
SYMPK-207ENST00000596824 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
SYMPK-207ENST00000596824 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
SYMPK-207ENST00000596824 EYA1Q99502 592 aa16■□□□□ 0.15
SYMPK-207ENST00000596824 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
SYMPK-207ENST00000596824 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
SYMPK-207ENST00000596824 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
SYMPK-207ENST00000596824 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
SYMPK-207ENST00000596824 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
SYMPK-207ENST00000596824 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
SYMPK-207ENST00000596824 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
SYMPK-207ENST00000596824 CYP27B1O15528 508 aa15.96■□□□□ 0.15
SYMPK-207ENST00000596824 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
SYMPK-207ENST00000596824 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
SYMPK-207ENST00000596824 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
SYMPK-207ENST00000596824 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
SYMPK-207ENST00000596824 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
SYMPK-207ENST00000596824 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
SYMPK-207ENST00000596824 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
SYMPK-207ENST00000596824 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
SYMPK-207ENST00000596824 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
SYMPK-207ENST00000596824 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
SYMPK-207ENST00000596824 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
SYMPK-207ENST00000596824 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
SYMPK-207ENST00000596824 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
SYMPK-207ENST00000596824 ZNF827Q17R98 1081 aa15.92■□□□□ 0.14
SYMPK-207ENST00000596824 SPON1Q9HCB6 807 aa15.92■□□□□ 0.14
SYMPK-207ENST00000596824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
SYMPK-207ENST00000596824 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
SYMPK-207ENST00000596824 COL5A3P25940 1745 aaPredicted RBP15.91■□□□□ 0.14
SYMPK-207ENST00000596824 AKT1S1Q96B36 256 aa15.9■□□□□ 0.14
SYMPK-207ENST00000596824 KCNQ4P56696 695 aa15.89■□□□□ 0.13
SYMPK-207ENST00000596824 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
SYMPK-207ENST00000596824 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
SYMPK-207ENST00000596824 KDRP35968 1356 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 ZBTB7AO95365 584 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 PHKG2P15735 406 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
SYMPK-207ENST00000596824 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-207ENST00000596824 ADAMTS7Q9UKP4 1686 aa15.87■□□□□ 0.13
SYMPK-207ENST00000596824 IL13P35225 146 aa15.87■□□□□ 0.13
SYMPK-207ENST00000596824 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
SYMPK-207ENST00000596824 MTHFSP49914 203 aa15.86■□□□□ 0.13
SYMPK-207ENST00000596824 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
SYMPK-207ENST00000596824 KDM6AO15550 1401 aaPredicted RBP15.85■□□□□ 0.13
SYMPK-207ENST00000596824 PTGER2P43116 358 aa15.85■□□□□ 0.13
SYMPK-207ENST00000596824 PIGBQ92521 554 aa15.85■□□□□ 0.13
SYMPK-207ENST00000596824 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
SYMPK-207ENST00000596824 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
SYMPK-207ENST00000596824 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
SYMPK-207ENST00000596824 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
SYMPK-207ENST00000596824 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
SYMPK-207ENST00000596824 TJP1Q07157 1748 aa15.84■□□□□ 0.13
SYMPK-207ENST00000596824 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
SYMPK-207ENST00000596824 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
SYMPK-207ENST00000596824 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
SYMPK-207ENST00000596824 SGIP1Q9BQI5 828 aa15.83■□□□□ 0.12
SYMPK-207ENST00000596824 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
SYMPK-207ENST00000596824 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
SYMPK-207ENST00000596824 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
SYMPK-207ENST00000596824 ZNF530Q6P9A1 599 aaPredicted RBP15.82■□□□□ 0.12
SYMPK-207ENST00000596824 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
SYMPK-207ENST00000596824 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
SYMPK-207ENST00000596824 CHD4Q14839 1912 aa15.81■□□□□ 0.12
SYMPK-207ENST00000596824 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
SYMPK-207ENST00000596824 MRC1P22897 1456 aa15.8■□□□□ 0.12
SYMPK-207ENST00000596824 HSP90AB1P08238 724 aaKnown RBP15.8■□□□□ 0.12
SYMPK-207ENST00000596824 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
SYMPK-207ENST00000596824 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
SYMPK-207ENST00000596824 DLG5Q8TDM6 1919 aa15.79■□□□□ 0.12
SYMPK-207ENST00000596824 ERVV-2B6SEH9 535 aa15.79■□□□□ 0.12
SYMPK-207ENST00000596824 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
SYMPK-207ENST00000596824 SLC16A10Q8TF71 515 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms