RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
IRF3-212ENST00000596756 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
IRF3-212ENST00000596756 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
IRF3-212ENST00000596756 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
IRF3-212ENST00000596756 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
IRF3-212ENST00000596756 NSD2O96028 1365 aa18.96■□□□□ 0.63
IRF3-212ENST00000596756 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
IRF3-212ENST00000596756 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
IRF3-212ENST00000596756 QSER1Q2KHR3 1735 aa18.96■□□□□ 0.63
IRF3-212ENST00000596756 SHANK3Q9BYB0 1731 aa18.96■□□□□ 0.63
IRF3-212ENST00000596756 ZNF784Q8NCA9 323 aaPredicted RBP18.95■□□□□ 0.62
IRF3-212ENST00000596756 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
IRF3-212ENST00000596756 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
IRF3-212ENST00000596756 INSRP06213 1382 aa18.94■□□□□ 0.62
IRF3-212ENST00000596756 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
IRF3-212ENST00000596756 PRIM1P49642 420 aaKnown RBP18.94■□□□□ 0.62
IRF3-212ENST00000596756 SLC16A10Q8TF71 515 aa18.94■□□□□ 0.62
IRF3-212ENST00000596756 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
IRF3-212ENST00000596756 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
IRF3-212ENST00000596756 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
IRF3-212ENST00000596756 CHD4Q14839 1912 aa18.93■□□□□ 0.62
IRF3-212ENST00000596756 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
IRF3-212ENST00000596756 FLT4P35916 1363 aa18.93■□□□□ 0.62
IRF3-212ENST00000596756 DOT1LQ8TEK3 1739 aa18.92■□□□□ 0.62
IRF3-212ENST00000596756 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
IRF3-212ENST00000596756 KIF20BQ96Q89 1820 aa18.92■□□□□ 0.62
IRF3-212ENST00000596756 PNPLA7Q6ZV29 1317 aa18.92■□□□□ 0.62
IRF3-212ENST00000596756 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
IRF3-212ENST00000596756 NSD3Q9BZ95 1437 aa18.91■□□□□ 0.62
IRF3-212ENST00000596756 GOLGB1Q14789 3259 aaKnown RBP18.91■□□□□ 0.62
IRF3-212ENST00000596756 LY75O60449 1722 aa18.91■□□□□ 0.62
IRF3-212ENST00000596756 RAPGEF4Q8WZA2 1011 aa18.9■□□□□ 0.62
IRF3-212ENST00000596756 TUBGCP6Q96RT7 1819 aa18.9■□□□□ 0.62
IRF3-212ENST00000596756 KCNQ4P56696 695 aa18.89■□□□□ 0.61
IRF3-212ENST00000596756 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
IRF3-212ENST00000596756 TATP17735 454 aaPredicted RBP18.87■□□□□ 0.61
IRF3-212ENST00000596756 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
IRF3-212ENST00000596756 PCDH11XQ9BZA7 1347 aa18.85■□□□□ 0.61
IRF3-212ENST00000596756 PCDH11YQ9BZA8 1340 aa18.85■□□□□ 0.61
IRF3-212ENST00000596756 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
IRF3-212ENST00000596756 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
IRF3-212ENST00000596756 ANKRD26Q9UPS8 1709 aa18.83■□□□□ 0.61
IRF3-212ENST00000596756 CYP27B1O15528 508 aa18.83■□□□□ 0.6
IRF3-212ENST00000596756 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
IRF3-212ENST00000596756 POLD1P28340 1107 aa18.82■□□□□ 0.6
IRF3-212ENST00000596756 COL23A1Q86Y22 540 aaPredicted RBP18.82■□□□□ 0.6
IRF3-212ENST00000596756 NLGN2Q8NFZ4 835 aa18.81■□□□□ 0.6
IRF3-212ENST00000596756 PPM1GO15355 546 aaPredicted RBP18.8■□□□□ 0.6
IRF3-212ENST00000596756 GPR162Q16538 588 aa18.8■□□□□ 0.6
IRF3-212ENST00000596756 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
IRF3-212ENST00000596756 POLKQ9UBT6 870 aa18.79■□□□□ 0.6
IRF3-212ENST00000596756 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
IRF3-212ENST00000596756 TOGARAM1Q9Y4F4 1720 aa18.78■□□□□ 0.6
IRF3-212ENST00000596756 C1QTNF8P60827 252 aa18.78■□□□□ 0.6
IRF3-212ENST00000596756 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
IRF3-212ENST00000596756 EYA1Q99502 592 aa18.78■□□□□ 0.6
IRF3-212ENST00000596756 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
IRF3-212ENST00000596756 POLR3GLQ9BT43 218 aa18.76■□□□□ 0.59
IRF3-212ENST00000596756 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
IRF3-212ENST00000596756 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■■■■■ 34.3
IRF3-212ENST00000596756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
IRF3-212ENST00000596756 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
IRF3-212ENST00000596756 C5P01031 1676 aa18.75■□□□□ 0.59
IRF3-212ENST00000596756 TAF1LQ8IZX4 1826 aa18.74■□□□□ 0.59
IRF3-212ENST00000596756 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
IRF3-212ENST00000596756 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
IRF3-212ENST00000596756 PIGBQ92521 554 aa18.74■□□□□ 0.59
IRF3-212ENST00000596756 EIF4A2Q14240 407 aaKnown RBP18.73■□□□□ 0.59
IRF3-212ENST00000596756 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
IRF3-212ENST00000596756 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
IRF3-212ENST00000596756 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
IRF3-212ENST00000596756 ITGB4P16144 1822 aa18.72■□□□□ 0.59
IRF3-212ENST00000596756 CEP350Q5VT06 3117 aa18.72■□□□□ 0.59
IRF3-212ENST00000596756 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 MSH5O43196 834 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
IRF3-212ENST00000596756 MSL1Q68DK7 614 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 PANK3Q9H999 370 aa18.71■□□□□ 0.59
IRF3-212ENST00000596756 GRIN3BO60391 1043 aa18.7■□□□□ 0.58
IRF3-212ENST00000596756 PHKG2P15735 406 aa18.7■□□□□ 0.58
IRF3-212ENST00000596756 CD2APQ9Y5K6 639 aa18.7■□□□□ 0.58
IRF3-212ENST00000596756 C4BP0C0L5 1744 aa18.69■□□□□ 0.58
IRF3-212ENST00000596756 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
IRF3-212ENST00000596756 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
IRF3-212ENST00000596756 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
IRF3-212ENST00000596756 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
IRF3-212ENST00000596756 LOC102724428A0A0B4J2F2 783 aa18.67■□□□□ 0.58
IRF3-212ENST00000596756 SIK1P57059 783 aa18.67■□□□□ 0.58
IRF3-212ENST00000596756 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
IRF3-212ENST00000596756 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
IRF3-212ENST00000596756 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
IRF3-212ENST00000596756 AK7Q96M32 723 aa18.66■□□□□ 0.58
IRF3-212ENST00000596756 GIGYF1O75420 1035 aaPredicted RBP18.65■□□□□ 0.58
IRF3-212ENST00000596756 SMIM5Q71RC9 77 aa18.65■□□□□ 0.58
IRF3-212ENST00000596756 LINC00116Q8NCU8 138 aa18.65■□□□□ 0.58
IRF3-212ENST00000596756 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
IRF3-212ENST00000596756 ITPK1Q13572 414 aa18.64■□□□□ 0.57
IRF3-212ENST00000596756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms