RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 MAP2P11137 1827 aaKnown RBP25.51■■□□□ 1.67
C19orf48-207ENST00000596655 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
C19orf48-207ENST00000596655 WDR43Q15061 677 aaKnown RBP eCLIP25.48■■□□□ 1.67
C19orf48-207ENST00000596655 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
C19orf48-207ENST00000596655 EXOC5O00471 708 aa25.48■■□□□ 1.67
C19orf48-207ENST00000596655 IL2RBP14784 551 aa25.48■■□□□ 1.67
C19orf48-207ENST00000596655 EN1Q05925 392 aaPredicted RBP25.48■■□□□ 1.67
C19orf48-207ENST00000596655 FLT4P35916 1363 aa25.47■■□□□ 1.67
C19orf48-207ENST00000596655 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
C19orf48-207ENST00000596655 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.67
C19orf48-207ENST00000596655 APBA3O96018 575 aa25.44■■□□□ 1.66
C19orf48-207ENST00000596655 HSP90AB2PQ58FF8 381 aa25.44■■□□□ 1.66
C19orf48-207ENST00000596655 BCL9O00512 1426 aa25.43■■□□□ 1.66
C19orf48-207ENST00000596655 MORC1Q86VD1 984 aa25.42■■□□□ 1.66
C19orf48-207ENST00000596655 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
C19orf48-207ENST00000596655 ZNF521Q96K83 1311 aa25.41■■□□□ 1.66
C19orf48-207ENST00000596655 RREB1Q92766 1687 aa25.41■■□□□ 1.66
C19orf48-207ENST00000596655 EZH2Q15910 746 aaKnown RBP25.41■■□□□ 1.66
C19orf48-207ENST00000596655 PPM1GO15355 546 aaPredicted RBP25.4■■□□□ 1.66
C19orf48-207ENST00000596655 NGEFQ8N5V2 710 aa25.4■■□□□ 1.66
C19orf48-207ENST00000596655 TNNT2P45379 298 aaPredicted RBP25.39■■□□□ 1.66
C19orf48-207ENST00000596655 NBPF6Q5VWK0 638 aa25.39■■□□□ 1.66
C19orf48-207ENST00000596655 NBPF4Q96M43 638 aa25.39■■□□□ 1.66
C19orf48-207ENST00000596655 CAMKK2Q96RR4 588 aa25.39■■□□□ 1.66
C19orf48-207ENST00000596655 SHANK3Q9BYB0 1731 aa25.39■■□□□ 1.65
C19orf48-207ENST00000596655 IRX6P78412 446 aaPredicted RBP25.38■■□□□ 1.65
C19orf48-207ENST00000596655 MEGF6O75095 1541 aa25.38■■□□□ 1.65
C19orf48-207ENST00000596655 RGPD3A6NKT7 1758 aaPredicted RBP25.38■■□□□ 1.65
C19orf48-207ENST00000596655 RGPD4Q7Z3J3 1758 aa25.38■■□□□ 1.65
C19orf48-207ENST00000596655 USHBP1Q8N6Y0 703 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 NHSQ6T4R5 1651 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 KAT6BQ8WYB5 2073 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 PTF1AQ7RTS3 328 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 POLKQ9UBT6 870 aa25.37■■□□□ 1.65
C19orf48-207ENST00000596655 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
C19orf48-207ENST00000596655 BCL11BQ9C0K0 894 aaPredicted RBP25.35■■□□□ 1.65
C19orf48-207ENST00000596655 CDCA7LQ96GN5 454 aa25.32■■□□□ 1.64
C19orf48-207ENST00000596655 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
C19orf48-207ENST00000596655 RCAN3Q9UKA8 241 aa25.31■■□□□ 1.64
C19orf48-207ENST00000596655 SALL2Q9Y467 1007 aaPredicted RBP25.31■■□□□ 1.64
C19orf48-207ENST00000596655 BTAF1O14981 1849 aa25.3■■□□□ 1.64
C19orf48-207ENST00000596655 RAPGEF4Q8WZA2 1011 aa25.3■■□□□ 1.64
C19orf48-207ENST00000596655 ACSBG1Q96GR2 724 aa25.3■■□□□ 1.64
C19orf48-207ENST00000596655 PSDA5PKW4 1024 aaPredicted RBP25.29■■□□□ 1.64
C19orf48-207ENST00000596655 KCNQ2O43526 872 aa25.29■■□□□ 1.64
C19orf48-207ENST00000596655 ZCRB1Q8TBF4 217 aaKnown RBP25.29■■□□□ 1.64
C19orf48-207ENST00000596655 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
C19orf48-207ENST00000596655 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
C19orf48-207ENST00000596655 PLSCR1O15162 318 aa25.28■■□□□ 1.64
C19orf48-207ENST00000596655 MTHFSP49914 203 aa25.27■■□□□ 1.64
C19orf48-207ENST00000596655 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
C19orf48-207ENST00000596655 TATP17735 454 aaPredicted RBP25.26■■□□□ 1.63
C19orf48-207ENST00000596655 NCBP3Q53F19 620 aaKnown RBP25.26■■□□□ 1.63
C19orf48-207ENST00000596655 CFAP53Q96M91 514 aa25.26■■□□□ 1.63
C19orf48-207ENST00000596655 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
C19orf48-207ENST00000596655 COL3A1P02461 1466 aaPredicted RBP25.26■■□□□ 1.63
C19orf48-207ENST00000596655 TRMT2AQ8IZ69 625 aaKnown RBP25.26■■□□□ 1.63
C19orf48-207ENST00000596655 GOLGA2Q08379 1002 aa25.24■■□□□ 1.63
C19orf48-207ENST00000596655 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
C19orf48-207ENST00000596655 EYA1Q99502 592 aa25.24■■□□□ 1.63
C19orf48-207ENST00000596655 R3HDM1Q15032 1099 aaKnown RBP25.23■■□□□ 1.63
C19orf48-207ENST00000596655 DUSP27Q5VZP5 1158 aa25.23■■□□□ 1.63
C19orf48-207ENST00000596655 TSHZ2Q9NRE2 1034 aa25.23■■□□□ 1.63
C19orf48-207ENST00000596655 APAF1O14727 1248 aa25.23■■□□□ 1.63
C19orf48-207ENST00000596655 SLFN5Q08AF3 891 aa25.21■■□□□ 1.63
C19orf48-207ENST00000596655 CCDC146Q8IYE0 955 aa25.21■■□□□ 1.63
C19orf48-207ENST00000596655 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
C19orf48-207ENST00000596655 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
C19orf48-207ENST00000596655 NBPF14Q5TI25 921 aa25.19■■□□□ 1.62
C19orf48-207ENST00000596655 PROM2Q8N271 834 aa25.19■■□□□ 1.62
C19orf48-207ENST00000596655 RUNDC1Q96C34 613 aa25.19■■□□□ 1.62
C19orf48-207ENST00000596655 SRCAPQ6ZRS2 3230 aa25.18■■□□□ 1.62
C19orf48-207ENST00000596655 TXNRD1Q16881 649 aa25.17■■□□□ 1.62
C19orf48-207ENST00000596655 IGSF1Q8N6C5 1336 aa25.16■■□□□ 1.62
C19orf48-207ENST00000596655 SYTL4Q96C24 671 aaPredicted RBP25.16■■□□□ 1.62
C19orf48-207ENST00000596655 LRP5O75197 1615 aa25.16■■□□□ 1.62
C19orf48-207ENST00000596655 PRIM1P49642 420 aaKnown RBP25.15■■□□□ 1.62
C19orf48-207ENST00000596655 TOGARAM1Q9Y4F4 1720 aa25.15■■□□□ 1.62
C19orf48-207ENST00000596655 CYP27B1O15528 508 aa25.15■■□□□ 1.62
C19orf48-207ENST00000596655 E9PSI1 815 aa25.14■■□□□ 1.61
C19orf48-207ENST00000596655 CCDC27Q2M243 656 aa25.14■■□□□ 1.61
C19orf48-207ENST00000596655 ITGB4P16144 1822 aa25.13■■□□□ 1.61
C19orf48-207ENST00000596655 ANO8Q9HCE9 1232 aaPredicted RBP25.13■■□□□ 1.61
C19orf48-207ENST00000596655 B4GALNT3Q6L9W6 998 aa25.12■■□□□ 1.61
C19orf48-207ENST00000596655 SPG7Q9UQ90 795 aa25.12■■□□□ 1.61
C19orf48-207ENST00000596655 LY75O60449 1722 aa25.12■■□□□ 1.61
C19orf48-207ENST00000596655 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
C19orf48-207ENST00000596655 PAPPAQ13219 1627 aa25.11■■□□□ 1.61
C19orf48-207ENST00000596655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
C19orf48-207ENST00000596655 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
C19orf48-207ENST00000596655 IL13P35225 146 aa25.08■■□□□ 1.6
C19orf48-207ENST00000596655 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
C19orf48-207ENST00000596655 SPINK5Q9NQ38 1064 aaPredicted RBP25.07■■□□□ 1.6
C19orf48-207ENST00000596655 CASZ1Q86V15 1759 aa25.06■■□□□ 1.6
C19orf48-207ENST00000596655 WDR63Q8IWG1 891 aa25.06■■□□□ 1.6
C19orf48-207ENST00000596655 NKX1-1Q15270 411 aaPredicted RBP25.04■■□□□ 1.6
C19orf48-207ENST00000596655 LRRC4BQ9NT99 713 aa25.04■■□□□ 1.6
C19orf48-207ENST00000596655 U2AF1L5P0DN76 240 aaPredicted RBP25.04■■□□□ 1.6
C19orf48-207ENST00000596655 PHKG2P15735 406 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms