RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
SAMD4B-204ENST00000596271 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
SAMD4B-204ENST00000596271 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
SAMD4B-204ENST00000596271 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
SAMD4B-204ENST00000596271 INSRP06213 1382 aa16.39■□□□□ 0.21
SAMD4B-204ENST00000596271 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
SAMD4B-204ENST00000596271 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
SAMD4B-204ENST00000596271 LRRC4BQ9NT99 713 aa16.39■□□□□ 0.21
SAMD4B-204ENST00000596271 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
SAMD4B-204ENST00000596271 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
SAMD4B-204ENST00000596271 ARXQ96QS3 562 aa16.38■□□□□ 0.21
SAMD4B-204ENST00000596271 NSD2O96028 1365 aa16.38■□□□□ 0.21
SAMD4B-204ENST00000596271 FLT4P35916 1363 aa16.38■□□□□ 0.21
SAMD4B-204ENST00000596271 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
SAMD4B-204ENST00000596271 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
SAMD4B-204ENST00000596271 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
SAMD4B-204ENST00000596271 BTAF1O14981 1849 aa16.36■□□□□ 0.21
SAMD4B-204ENST00000596271 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
SAMD4B-204ENST00000596271 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
SAMD4B-204ENST00000596271 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
SAMD4B-204ENST00000596271 POLD1P28340 1107 aa16.35■□□□□ 0.21
SAMD4B-204ENST00000596271 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
SAMD4B-204ENST00000596271 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 RRS1Q15050 365 aaKnown RBP16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
SAMD4B-204ENST00000596271 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.2
SAMD4B-204ENST00000596271 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
SAMD4B-204ENST00000596271 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
SAMD4B-204ENST00000596271 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
SAMD4B-204ENST00000596271 TFCP2L1Q9NZI6 479 aa16.33■□□□□ 0.2
SAMD4B-204ENST00000596271 MEGF6O75095 1541 aa16.32■□□□□ 0.2
SAMD4B-204ENST00000596271 FBLN1P23142 703 aa16.32■□□□□ 0.2
SAMD4B-204ENST00000596271 QSER1Q2KHR3 1735 aa16.31■□□□□ 0.2
SAMD4B-204ENST00000596271 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
SAMD4B-204ENST00000596271 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
SAMD4B-204ENST00000596271 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
SAMD4B-204ENST00000596271 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
SAMD4B-204ENST00000596271 PNPLA7Q6ZV29 1317 aa16.3■□□□□ 0.2
SAMD4B-204ENST00000596271 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
SAMD4B-204ENST00000596271 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
SAMD4B-204ENST00000596271 MYOM1P52179 1685 aa16.29■□□□□ 0.2
SAMD4B-204ENST00000596271 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
SAMD4B-204ENST00000596271 LY75O60449 1722 aa16.27■□□□□ 0.19
SAMD4B-204ENST00000596271 COL24A1Q17RW2 1714 aa16.26■□□□□ 0.19
SAMD4B-204ENST00000596271 NSD3Q9BZ95 1437 aa16.26■□□□□ 0.19
SAMD4B-204ENST00000596271 CYP27B1O15528 508 aa16.25■□□□□ 0.19
SAMD4B-204ENST00000596271 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
SAMD4B-204ENST00000596271 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
SAMD4B-204ENST00000596271 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
SAMD4B-204ENST00000596271 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 GPR162Q16538 588 aa16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 POLKQ9UBT6 870 aa16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
SAMD4B-204ENST00000596271 KIF20BQ96Q89 1820 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 CHD4Q14839 1912 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 EIF4G2P78344 907 aaKnown RBP eCLIP16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 UTRNP46939 3433 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
SAMD4B-204ENST00000596271 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
SAMD4B-204ENST00000596271 EYA1Q99502 592 aa16.21■□□□□ 0.19
SAMD4B-204ENST00000596271 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
SAMD4B-204ENST00000596271 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
SAMD4B-204ENST00000596271 KCNQ4P56696 695 aa16.19■□□□□ 0.18
SAMD4B-204ENST00000596271 PIGBQ92521 554 aa16.19■□□□□ 0.18
SAMD4B-204ENST00000596271 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
SAMD4B-204ENST00000596271 SSFA2P28290 1259 aa16.18■□□□□ 0.18
SAMD4B-204ENST00000596271 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 PHKG2P15735 406 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 SIK1P57059 783 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 AK7Q96M32 723 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 TMOD3Q9NYL9 352 aa16.17■□□□□ 0.18
SAMD4B-204ENST00000596271 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
SAMD4B-204ENST00000596271 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
SAMD4B-204ENST00000596271 MAP2P11137 1827 aaKnown RBP16.15■□□□□ 0.18
SAMD4B-204ENST00000596271 PLEKHO1Q53GL0 409 aaPredicted RBP16.14■□□□□ 0.17
SAMD4B-204ENST00000596271 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
SAMD4B-204ENST00000596271 PANK3Q9H999 370 aa16.14■□□□□ 0.17
SAMD4B-204ENST00000596271 C5P01031 1676 aa16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
SAMD4B-204ENST00000596271 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
SAMD4B-204ENST00000596271 ITGB4P16144 1822 aa16.1■□□□□ 0.17
SAMD4B-204ENST00000596271 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
SAMD4B-204ENST00000596271 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
SAMD4B-204ENST00000596271 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
SAMD4B-204ENST00000596271 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms