RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
SMG9-203ENST00000595700 NBPF14Q5TI25 921 aa20.33■□□□□ 0.84
SMG9-203ENST00000595700 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
SMG9-203ENST00000595700 KIF7Q2M1P5 1343 aa20.31■□□□□ 0.84
SMG9-203ENST00000595700 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
SMG9-203ENST00000595700 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
SMG9-203ENST00000595700 NSD2O96028 1365 aa20.29■□□□□ 0.84
SMG9-203ENST00000595700 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
SMG9-203ENST00000595700 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
SMG9-203ENST00000595700 PROM2Q8N271 834 aa20.28■□□□□ 0.84
SMG9-203ENST00000595700 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
SMG9-203ENST00000595700 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
SMG9-203ENST00000595700 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
SMG9-203ENST00000595700 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SMG9-203ENST00000595700 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
SMG9-203ENST00000595700 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
SMG9-203ENST00000595700 PAPPAQ13219 1627 aa20.26■□□□□ 0.83
SMG9-203ENST00000595700 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
SMG9-203ENST00000595700 SYTL4Q96C24 671 aaPredicted RBP20.24■□□□□ 0.83
SMG9-203ENST00000595700 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
SMG9-203ENST00000595700 LY75O60449 1722 aa20.23■□□□□ 0.83
SMG9-203ENST00000595700 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
SMG9-203ENST00000595700 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
SMG9-203ENST00000595700 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
SMG9-203ENST00000595700 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
SMG9-203ENST00000595700 EIF4A2Q14240 407 aaKnown RBP20.21■□□□□ 0.83
SMG9-203ENST00000595700 EYA1Q99502 592 aa20.21■□□□□ 0.83
SMG9-203ENST00000595700 ITGB4P16144 1822 aa20.2■□□□□ 0.82
SMG9-203ENST00000595700 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
SMG9-203ENST00000595700 CYP27B1O15528 508 aa20.18■□□□□ 0.82
SMG9-203ENST00000595700 SLC15A2Q16348 729 aa20.18■□□□□ 0.82
SMG9-203ENST00000595700 AMER1Q5JTC6 1135 aaPredicted RBP20.18■□□□□ 0.82
SMG9-203ENST00000595700 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
SMG9-203ENST00000595700 TUBGCP6Q96RT7 1819 aa20.17■□□□□ 0.82
SMG9-203ENST00000595700 LRRC4BQ9NT99 713 aa20.16■□□□□ 0.82
SMG9-203ENST00000595700 QSER1Q2KHR3 1735 aa20.15■□□□□ 0.82
SMG9-203ENST00000595700 IGSF1Q8N6C5 1336 aa20.15■□□□□ 0.82
SMG9-203ENST00000595700 ZNF827Q17R98 1081 aa20.14■□□□□ 0.81
SMG9-203ENST00000595700 SPG7Q9UQ90 795 aa20.14■□□□□ 0.81
SMG9-203ENST00000595700 KCNQ4P56696 695 aa20.13■□□□□ 0.81
SMG9-203ENST00000595700 SPON1Q9HCB6 807 aa20.13■□□□□ 0.81
SMG9-203ENST00000595700 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
SMG9-203ENST00000595700 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
SMG9-203ENST00000595700 C5P01031 1676 aa20.12■□□□□ 0.81
SMG9-203ENST00000595700 ZBTB7AO95365 584 aa20.11■□□□□ 0.81
SMG9-203ENST00000595700 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
SMG9-203ENST00000595700 MPRIPQ6WCQ1 1025 aa20.1■□□□□ 0.81
SMG9-203ENST00000595700 TAF1LQ8IZX4 1826 aa20.1■□□□□ 0.81
SMG9-203ENST00000595700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.1■□□□□ 0.81
SMG9-203ENST00000595700 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
SMG9-203ENST00000595700 PPP1R1BQ9UD71 204 aaPredicted RBP20.09■□□□□ 0.81
SMG9-203ENST00000595700 CCNL1Q9UK58 526 aaPredicted RBP20.09■□□□□ 0.81
SMG9-203ENST00000595700 PHKG2P15735 406 aa20.08■□□□□ 0.8
SMG9-203ENST00000595700 NKX1-1Q15270 411 aaPredicted RBP20.08■□□□□ 0.8
SMG9-203ENST00000595700 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.8
SMG9-203ENST00000595700 AKT1S1Q96B36 256 aa20.08■□□□□ 0.8
SMG9-203ENST00000595700 PLEKHG2Q9H7P9 1386 aa20.08■□□□□ 0.8
SMG9-203ENST00000595700 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
SMG9-203ENST00000595700 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
SMG9-203ENST00000595700 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
SMG9-203ENST00000595700 IL13P35225 146 aa20.05■□□□□ 0.8
SMG9-203ENST00000595700 MTHFSP49914 203 aa20.05■□□□□ 0.8
SMG9-203ENST00000595700 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
SMG9-203ENST00000595700 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 PIGBQ92521 554 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 KDRP35968 1356 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 PNPLA7Q6ZV29 1317 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
SMG9-203ENST00000595700 PTGER2P43116 358 aa20.02■□□□□ 0.8
SMG9-203ENST00000595700 PLEKHO1Q53GL0 409 aaPredicted RBP20.02■□□□□ 0.8
SMG9-203ENST00000595700 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
SMG9-203ENST00000595700 TFCP2L1Q9NZI6 479 aa20.02■□□□□ 0.8
SMG9-203ENST00000595700 ZNF530Q6P9A1 599 aaPredicted RBP20.02■□□□□ 0.79
SMG9-203ENST00000595700 COL24A1Q17RW2 1714 aa20.01■□□□□ 0.79
SMG9-203ENST00000595700 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
SMG9-203ENST00000595700 COL3A1P02461 1466 aaPredicted RBP20.01■□□□□ 0.79
SMG9-203ENST00000595700 SMARCC1Q92922 1105 aaPredicted RBP20.01■□□□□ 0.79
SMG9-203ENST00000595700 KDM6AO15550 1401 aaPredicted RBP20.01■□□□□ 0.79
SMG9-203ENST00000595700 AMOTQ4VCS5 1084 aa20■□□□□ 0.79
SMG9-203ENST00000595700 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
SMG9-203ENST00000595700 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
SMG9-203ENST00000595700 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
SMG9-203ENST00000595700 DIAPH1O60610 1272 aaKnown RBP19.97■□□□□ 0.79
SMG9-203ENST00000595700 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
SMG9-203ENST00000595700 HMOX1P09601 288 aa19.97■□□□□ 0.79
SMG9-203ENST00000595700 DCAF5Q96JK2 942 aa19.97■□□□□ 0.79
SMG9-203ENST00000595700 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
SMG9-203ENST00000595700 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
SMG9-203ENST00000595700 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
SMG9-203ENST00000595700 SLC16A10Q8TF71 515 aa19.94■□□□□ 0.78
SMG9-203ENST00000595700 ATG3Q9NT62 314 aa19.94■□□□□ 0.78
SMG9-203ENST00000595700 ZNF831Q5JPB2 1677 aa19.93■□□□□ 0.78
SMG9-203ENST00000595700 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
SMG9-203ENST00000595700 MSH5O43196 834 aa19.93■□□□□ 0.78
SMG9-203ENST00000595700 SIK1P57059 783 aa19.93■□□□□ 0.78
SMG9-203ENST00000595700 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
SMG9-203ENST00000595700 COL5A3P25940 1745 aaPredicted RBP19.93■□□□□ 0.78
SMG9-203ENST00000595700 CABP4P57796 275 aa19.93■□□□□ 0.78
SMG9-203ENST00000595700 ARXQ96QS3 562 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms