RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.07
USHBP1-204ENST00000594190 COG3Q96JB2 828 aa21.76■■□□□ 1.07
USHBP1-204ENST00000594190 ANO8Q9HCE9 1232 aaPredicted RBP21.76■■□□□ 1.07
USHBP1-204ENST00000594190 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
USHBP1-204ENST00000594190 HOXC9P31274 260 aa21.75■■□□□ 1.07
USHBP1-204ENST00000594190 CARD14Q9BXL6 1004 aa21.75■■□□□ 1.07
USHBP1-204ENST00000594190 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
USHBP1-204ENST00000594190 KAT6BQ8WYB5 2073 aa21.72■■□□□ 1.07
USHBP1-204ENST00000594190 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
USHBP1-204ENST00000594190 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
USHBP1-204ENST00000594190 MEGF6O75095 1541 aa21.7■■□□□ 1.07
USHBP1-204ENST00000594190 TXNRD1Q16881 649 aa21.69■■□□□ 1.06
USHBP1-204ENST00000594190 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
USHBP1-204ENST00000594190 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
USHBP1-204ENST00000594190 LY75O60449 1722 aa21.69■■□□□ 1.06
USHBP1-204ENST00000594190 MAP2P11137 1827 aaKnown RBP21.68■■□□□ 1.06
USHBP1-204ENST00000594190 QSER1Q2KHR3 1735 aa21.67■■□□□ 1.06
USHBP1-204ENST00000594190 RRS1Q15050 365 aaKnown RBP21.67■■□□□ 1.06
USHBP1-204ENST00000594190 PDGFDQ9GZP0 370 aaPredicted RBP21.67■■□□□ 1.06
USHBP1-204ENST00000594190 KIF24Q5T7B8 1368 aa21.66■■□□□ 1.06
USHBP1-204ENST00000594190 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
USHBP1-204ENST00000594190 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
USHBP1-204ENST00000594190 AMPHP49418 695 aa21.65■■□□□ 1.06
USHBP1-204ENST00000594190 NCAPD2Q15021 1401 aa21.64■■□□□ 1.06
USHBP1-204ENST00000594190 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.06
USHBP1-204ENST00000594190 INSRP06213 1382 aa21.64■■□□□ 1.06
USHBP1-204ENST00000594190 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
USHBP1-204ENST00000594190 NBPF6Q5VWK0 638 aa21.64■■□□□ 1.05
USHBP1-204ENST00000594190 NBPF4Q96M43 638 aa21.64■■□□□ 1.05
USHBP1-204ENST00000594190 MORC1Q86VD1 984 aa21.63■■□□□ 1.05
USHBP1-204ENST00000594190 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
USHBP1-204ENST00000594190 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
USHBP1-204ENST00000594190 SLC15A2Q16348 729 aa21.61■■□□□ 1.05
USHBP1-204ENST00000594190 HSP90AB2PQ58FF8 381 aa21.61■■□□□ 1.05
USHBP1-204ENST00000594190 FLT4P35916 1363 aa21.61■■□□□ 1.05
USHBP1-204ENST00000594190 PPP2R1AP30153 589 aa21.6■■□□□ 1.05
USHBP1-204ENST00000594190 LRRC4BQ9NT99 713 aa21.6■■□□□ 1.05
USHBP1-204ENST00000594190 TOGARAM1Q9Y4F4 1720 aa21.59■■□□□ 1.05
USHBP1-204ENST00000594190 ZBTB7AO95365 584 aa21.58■■□□□ 1.05
USHBP1-204ENST00000594190 PTGER2P43116 358 aa21.58■■□□□ 1.05
USHBP1-204ENST00000594190 DDX54Q8TDD1 881 aaKnown RBP21.58■■□□□ 1.05
USHBP1-204ENST00000594190 ITGB4P16144 1822 aa21.57■■□□□ 1.04
USHBP1-204ENST00000594190 ZCRB1Q8TBF4 217 aaKnown RBP21.57■■□□□ 1.04
USHBP1-204ENST00000594190 SGIP1Q9BQI5 828 aa21.57■■□□□ 1.04
USHBP1-204ENST00000594190 STK32BQ9NY57 414 aa21.57■■□□□ 1.04
USHBP1-204ENST00000594190 UTRNP46939 3433 aa21.57■■□□□ 1.04
USHBP1-204ENST00000594190 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
USHBP1-204ENST00000594190 EMILIN1Q9Y6C2 1016 aa21.56■■□□□ 1.04
USHBP1-204ENST00000594190 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
USHBP1-204ENST00000594190 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
USHBP1-204ENST00000594190 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
USHBP1-204ENST00000594190 USHBP1Q8N6Y0 703 aa21.55■■□□□ 1.04
USHBP1-204ENST00000594190 ATF5Q9Y2D1 282 aaPredicted RBP21.55■■□□□ 1.04
USHBP1-204ENST00000594190 PNISRQ8TF01 805 aaKnown RBP21.54■■□□□ 1.04
USHBP1-204ENST00000594190 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
USHBP1-204ENST00000594190 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
USHBP1-204ENST00000594190 PRIM1P49642 420 aaKnown RBP21.53■■□□□ 1.04
USHBP1-204ENST00000594190 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
USHBP1-204ENST00000594190 SLC27A3Q5K4L6 730 aa21.51■■□□□ 1.03
USHBP1-204ENST00000594190 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
USHBP1-204ENST00000594190 SYT17Q9BSW7 474 aa21.5■■□□□ 1.03
USHBP1-204ENST00000594190 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
USHBP1-204ENST00000594190 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-204ENST00000594190 FHDC1Q9C0D6 1143 aaPredicted RBP21.49■■□□□ 1.03
USHBP1-204ENST00000594190 MTFR1LQ9H019 292 aa21.49■■□□□ 1.03
USHBP1-204ENST00000594190 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
USHBP1-204ENST00000594190 C5P01031 1676 aa21.49■■□□□ 1.03
USHBP1-204ENST00000594190 CHD4Q14839 1912 aa21.49■■□□□ 1.03
USHBP1-204ENST00000594190 CYP27B1O15528 508 aa21.48■■□□□ 1.03
USHBP1-204ENST00000594190 RAPGEF4Q8WZA2 1011 aa21.48■■□□□ 1.03
USHBP1-204ENST00000594190 TATP17735 454 aaPredicted RBP21.47■■□□□ 1.03
USHBP1-204ENST00000594190 PCDH11XQ9BZA7 1347 aa21.47■■□□□ 1.03
USHBP1-204ENST00000594190 PCDH11YQ9BZA8 1340 aa21.47■■□□□ 1.03
USHBP1-204ENST00000594190 KCNQ4P56696 695 aa21.45■■□□□ 1.02
USHBP1-204ENST00000594190 EYA1Q99502 592 aa21.45■■□□□ 1.02
USHBP1-204ENST00000594190 PNPLA7Q6ZV29 1317 aa21.45■■□□□ 1.02
USHBP1-204ENST00000594190 WDR43Q15061 677 aaKnown RBP eCLIP21.44■■□□□ 1.02
USHBP1-204ENST00000594190 NKX1-1Q15270 411 aaPredicted RBP21.44■■□□□ 1.02
USHBP1-204ENST00000594190 GOLGB1Q14789 3259 aaKnown RBP21.44■■□□□ 1.02
USHBP1-204ENST00000594190 SYTL4Q96C24 671 aaPredicted RBP21.43■■□□□ 1.02
USHBP1-204ENST00000594190 MTHFSP49914 203 aa21.42■■□□□ 1.02
USHBP1-204ENST00000594190 MAP3K5Q99683 1374 aa21.42■■□□□ 1.02
USHBP1-204ENST00000594190 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
USHBP1-204ENST00000594190 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
USHBP1-204ENST00000594190 ARXQ96QS3 562 aa21.41■■□□□ 1.02
USHBP1-204ENST00000594190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.4■■□□□ 1.02
USHBP1-204ENST00000594190 UBR3Q6ZT12 1888 aa21.4■■□□□ 1.02
USHBP1-204ENST00000594190 PPM1GO15355 546 aaPredicted RBP21.39■■□□□ 1.01
USHBP1-204ENST00000594190 HNRNPUQ00839 825 aaKnown RBP eCLIP21.39■■□□□ 1.01
USHBP1-204ENST00000594190 EIF4A2Q14240 407 aaKnown RBP21.39■■□□□ 1.01
USHBP1-204ENST00000594190 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
USHBP1-204ENST00000594190 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
USHBP1-204ENST00000594190 SENP3-EIF4A1A0A087X0R7 540 aa21.38■■□□□ 1.01
USHBP1-204ENST00000594190 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
USHBP1-204ENST00000594190 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
USHBP1-204ENST00000594190 NUDCQ9Y266 331 aa21.37■■□□□ 1.01
USHBP1-204ENST00000594190 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
USHBP1-204ENST00000594190 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
USHBP1-204ENST00000594190 ZNF831Q5JPB2 1677 aa21.35■■□□□ 1.01
USHBP1-204ENST00000594190 C1QTNF8P60827 252 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms