RNA–Protein interactions for RNA: ENST00000594021.5

DDX49-203, Transcript of DEAD-box helicase 49, humanhuman

TSL 4

Gene DDX49, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-203ENST00000594021 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
DDX49-203ENST00000594021 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
DDX49-203ENST00000594021 SLC15A2Q16348 729 aa17.08■□□□□ 0.32
DDX49-203ENST00000594021 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
DDX49-203ENST00000594021 COG3Q96JB2 828 aa17.08■□□□□ 0.32
DDX49-203ENST00000594021 SPON1Q9HCB6 807 aa17.08■□□□□ 0.32
DDX49-203ENST00000594021 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
DDX49-203ENST00000594021 C5P01031 1676 aa17.07■□□□□ 0.32
DDX49-203ENST00000594021 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
DDX49-203ENST00000594021 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
DDX49-203ENST00000594021 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
DDX49-203ENST00000594021 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
DDX49-203ENST00000594021 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
DDX49-203ENST00000594021 AMPHP49418 695 aa17.03■□□□□ 0.32
DDX49-203ENST00000594021 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
DDX49-203ENST00000594021 TMF1P82094 1093 aa17.03■□□□□ 0.32
DDX49-203ENST00000594021 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
DDX49-203ENST00000594021 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
DDX49-203ENST00000594021 INSRP06213 1382 aa17.02■□□□□ 0.31
DDX49-203ENST00000594021 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
DDX49-203ENST00000594021 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
DDX49-203ENST00000594021 CHD4Q14839 1912 aa17■□□□□ 0.31
DDX49-203ENST00000594021 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
DDX49-203ENST00000594021 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
DDX49-203ENST00000594021 CYP27B1O15528 508 aa16.99■□□□□ 0.31
DDX49-203ENST00000594021 PPP1R1BQ9UD71 204 aaPredicted RBP16.99■□□□□ 0.31
DDX49-203ENST00000594021 FLT4P35916 1363 aa16.99■□□□□ 0.31
DDX49-203ENST00000594021 SMIM5Q71RC9 77 aa16.98■□□□□ 0.31
DDX49-203ENST00000594021 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
DDX49-203ENST00000594021 SYTL4Q96C24 671 aaPredicted RBP16.97■□□□□ 0.31
DDX49-203ENST00000594021 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
DDX49-203ENST00000594021 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
DDX49-203ENST00000594021 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
DDX49-203ENST00000594021 HSPA5P11021 654 aaKnown RBP16.93■□□□□ 0.3
DDX49-203ENST00000594021 VIRMAQ69YN4 1812 aaKnown RBP16.92■□□□□ 0.3
DDX49-203ENST00000594021 YY1P25490 414 aa16.92■□□□□ 0.3
DDX49-203ENST00000594021 POLKQ9UBT6 870 aa16.92■□□□□ 0.3
DDX49-203ENST00000594021 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
DDX49-203ENST00000594021 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
DDX49-203ENST00000594021 EYA1Q99502 592 aa16.91■□□□□ 0.3
DDX49-203ENST00000594021 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
DDX49-203ENST00000594021 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
DDX49-203ENST00000594021 COL23A1Q86Y22 540 aaPredicted RBP16.9■□□□□ 0.3
DDX49-203ENST00000594021 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
DDX49-203ENST00000594021 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.3
DDX49-203ENST00000594021 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
DDX49-203ENST00000594021 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
DDX49-203ENST00000594021 ARXQ96QS3 562 aa16.89■□□□□ 0.29
DDX49-203ENST00000594021 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.29
DDX49-203ENST00000594021 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
DDX49-203ENST00000594021 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.29
DDX49-203ENST00000594021 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
DDX49-203ENST00000594021 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
DDX49-203ENST00000594021 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
DDX49-203ENST00000594021 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
DDX49-203ENST00000594021 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
DDX49-203ENST00000594021 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
DDX49-203ENST00000594021 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
DDX49-203ENST00000594021 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
DDX49-203ENST00000594021 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
DDX49-203ENST00000594021 PIGBQ92521 554 aa16.87■□□□□ 0.29
DDX49-203ENST00000594021 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
DDX49-203ENST00000594021 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
DDX49-203ENST00000594021 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 PANK3Q9H999 370 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 CGNL1Q0VF96 1302 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
DDX49-203ENST00000594021 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
DDX49-203ENST00000594021 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
DDX49-203ENST00000594021 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
DDX49-203ENST00000594021 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
DDX49-203ENST00000594021 TJP1Q07157 1748 aa16.83■□□□□ 0.28
DDX49-203ENST00000594021 ITPK1Q13572 414 aa16.83■□□□□ 0.28
DDX49-203ENST00000594021 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
DDX49-203ENST00000594021 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
DDX49-203ENST00000594021 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
DDX49-203ENST00000594021 SCN11AQ9UI33 1791 aa16.83■□□□□ 0.28
DDX49-203ENST00000594021 KDRP35968 1356 aa16.82■□□□□ 0.28
DDX49-203ENST00000594021 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
DDX49-203ENST00000594021 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX49-203ENST00000594021 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
DDX49-203ENST00000594021 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
DDX49-203ENST00000594021 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
DDX49-203ENST00000594021 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
DDX49-203ENST00000594021 PHKG2P15735 406 aa16.8■□□□□ 0.28
DDX49-203ENST00000594021 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
DDX49-203ENST00000594021 KIF13BQ9NQT8 1826 aa16.79■□□□□ 0.28
DDX49-203ENST00000594021 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
DDX49-203ENST00000594021 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
DDX49-203ENST00000594021 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
DDX49-203ENST00000594021 KIF7Q2M1P5 1343 aa16.77■□□□□ 0.28
DDX49-203ENST00000594021 ATG3Q9NT62 314 aa16.77■□□□□ 0.28
DDX49-203ENST00000594021 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
DDX49-203ENST00000594021 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
DDX49-203ENST00000594021 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
DDX49-203ENST00000594021 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
DDX49-203ENST00000594021 LOC102724428A0A0B4J2F2 783 aa16.75■□□□□ 0.27
DDX49-203ENST00000594021 PHF14O94880 888 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms