RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 IL2RBP14784 551 aa17.63■□□□□ 0.41
ZNF558-202ENST00000593891 ARHGEF25Q86VW2 580 aa17.62■□□□□ 0.41
ZNF558-202ENST00000593891 TUBGCP6Q96RT7 1819 aa17.62■□□□□ 0.41
ZNF558-202ENST00000593891 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
ZNF558-202ENST00000593891 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
ZNF558-202ENST00000593891 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
ZNF558-202ENST00000593891 PXDNLA1KZ92 1463 aa17.59■□□□□ 0.41
ZNF558-202ENST00000593891 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
ZNF558-202ENST00000593891 LBX1P52954 281 aa17.59■□□□□ 0.41
ZNF558-202ENST00000593891 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
ZNF558-202ENST00000593891 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.4
ZNF558-202ENST00000593891 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
ZNF558-202ENST00000593891 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
ZNF558-202ENST00000593891 SLIT3O75094 1523 aa17.57■□□□□ 0.4
ZNF558-202ENST00000593891 COL18A1P39060 1754 aa17.56■□□□□ 0.4
ZNF558-202ENST00000593891 KIAA1210Q9ULL0 1709 aa17.56■□□□□ 0.4
ZNF558-202ENST00000593891 FCHSD2O94868 740 aa17.56■□□□□ 0.4
ZNF558-202ENST00000593891 TGFB2P61812 414 aa17.56■□□□□ 0.4
ZNF558-202ENST00000593891 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
ZNF558-202ENST00000593891 CREBZFQ9NS37 354 aa17.55■□□□□ 0.4
ZNF558-202ENST00000593891 RNF181Q9P0P0 153 aa17.55■□□□□ 0.4
ZNF558-202ENST00000593891 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
ZNF558-202ENST00000593891 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
ZNF558-202ENST00000593891 A0A0G2JLW4 131 aa17.53■□□□□ 0.4
ZNF558-202ENST00000593891 SOX12O15370 315 aa17.53■□□□□ 0.4
ZNF558-202ENST00000593891 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
ZNF558-202ENST00000593891 USP47Q96K76 1375 aa17.52■□□□□ 0.39
ZNF558-202ENST00000593891 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
ZNF558-202ENST00000593891 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
ZNF558-202ENST00000593891 AK7Q96M32 723 aa17.49■□□□□ 0.39
ZNF558-202ENST00000593891 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
ZNF558-202ENST00000593891 PHF14O94880 888 aa17.47■□□□□ 0.39
ZNF558-202ENST00000593891 HSPA8P11142 646 aaKnown RBP17.47■□□□□ 0.39
ZNF558-202ENST00000593891 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
ZNF558-202ENST00000593891 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
ZNF558-202ENST00000593891 NSD2O96028 1365 aa17.46■□□□□ 0.39
ZNF558-202ENST00000593891 DPEP1P16444 411 aa17.46■□□□□ 0.39
ZNF558-202ENST00000593891 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
ZNF558-202ENST00000593891 ERBB3P21860 1342 aa17.46■□□□□ 0.38
ZNF558-202ENST00000593891 LY75O60449 1722 aa17.45■□□□□ 0.38
ZNF558-202ENST00000593891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
ZNF558-202ENST00000593891 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
ZNF558-202ENST00000593891 ZC3H4Q9UPT8 1303 aaKnown RBP17.45■□□□□ 0.38
ZNF558-202ENST00000593891 MMP10P09238 476 aa17.44■□□□□ 0.38
ZNF558-202ENST00000593891 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
ZNF558-202ENST00000593891 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
ZNF558-202ENST00000593891 VEGFBP49765 207 aa17.42■□□□□ 0.38
ZNF558-202ENST00000593891 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
ZNF558-202ENST00000593891 SSFA2P28290 1259 aa17.41■□□□□ 0.38
ZNF558-202ENST00000593891 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
ZNF558-202ENST00000593891 PDE4DIPQ5VU43 2346 aa17.4■□□□□ 0.38
ZNF558-202ENST00000593891 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
ZNF558-202ENST00000593891 ANKRD24Q8TF21 1146 aa17.4■□□□□ 0.38
ZNF558-202ENST00000593891 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
ZNF558-202ENST00000593891 RGPD5Q99666 1765 aa17.39■□□□□ 0.37
ZNF558-202ENST00000593891 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
ZNF558-202ENST00000593891 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
ZNF558-202ENST00000593891 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
ZNF558-202ENST00000593891 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.37
ZNF558-202ENST00000593891 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
ZNF558-202ENST00000593891 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
ZNF558-202ENST00000593891 PKD1L3Q7Z443 1732 aa17.38■□□□□ 0.37
ZNF558-202ENST00000593891 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
ZNF558-202ENST00000593891 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
ZNF558-202ENST00000593891 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
ZNF558-202ENST00000593891 KCNA3P22001 575 aa17.35■□□□□ 0.37
ZNF558-202ENST00000593891 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
ZNF558-202ENST00000593891 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
ZNF558-202ENST00000593891 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
ZNF558-202ENST00000593891 C5P01031 1676 aa17.34■□□□□ 0.37
ZNF558-202ENST00000593891 NLGN1Q8N2Q7 840 aa17.34■□□□□ 0.37
ZNF558-202ENST00000593891 DPY19L2Q6NUT2 758 aa17.33■□□□□ 0.36
ZNF558-202ENST00000593891 N4BP2Q86UW6 1770 aaPredicted RBP17.33■□□□□ 0.36
ZNF558-202ENST00000593891 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
ZNF558-202ENST00000593891 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
ZNF558-202ENST00000593891 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
ZNF558-202ENST00000593891 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
ZNF558-202ENST00000593891 POTECB2RU33 542 aa17.31■□□□□ 0.36
ZNF558-202ENST00000593891 LMNB1P20700 586 aa17.31■□□□□ 0.36
ZNF558-202ENST00000593891 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
ZNF558-202ENST00000593891 NFAT5O94916 1531 aa17.31■□□□□ 0.36
ZNF558-202ENST00000593891 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
ZNF558-202ENST00000593891 TMF1P82094 1093 aa17.3■□□□□ 0.36
ZNF558-202ENST00000593891 DCAF11Q8TEB1 546 aa17.3■□□□□ 0.36
ZNF558-202ENST00000593891 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
ZNF558-202ENST00000593891 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
ZNF558-202ENST00000593891 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
ZNF558-202ENST00000593891 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
ZNF558-202ENST00000593891 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
ZNF558-202ENST00000593891 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
ZNF558-202ENST00000593891 C4BP0C0L5 1744 aa17.28■□□□□ 0.36
ZNF558-202ENST00000593891 GNPATO15228 680 aa17.28■□□□□ 0.36
ZNF558-202ENST00000593891 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
ZNF558-202ENST00000593891 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
ZNF558-202ENST00000593891 RASSF7Q02833 373 aa17.27■□□□□ 0.36
ZNF558-202ENST00000593891 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
ZNF558-202ENST00000593891 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
ZNF558-202ENST00000593891 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
ZNF558-202ENST00000593891 KDM6AO15550 1401 aaPredicted RBP17.25■□□□□ 0.35
ZNF558-202ENST00000593891 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms