RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
SNAPC2-202ENST00000593598 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
SNAPC2-202ENST00000593598 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
SNAPC2-202ENST00000593598 RGPD1P0DJD0 1748 aa18.42■□□□□ 0.54
SNAPC2-202ENST00000593598 ANP32CO43423 234 aa18.41■□□□□ 0.54
SNAPC2-202ENST00000593598 DDX54Q8TDD1 881 aaKnown RBP18.41■□□□□ 0.54
SNAPC2-202ENST00000593598 KDRP35968 1356 aa18.41■□□□□ 0.54
SNAPC2-202ENST00000593598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNAPC2-202ENST00000593598 HMOX1P09601 288 aa18.39■□□□□ 0.53
SNAPC2-202ENST00000593598 SPG7Q9UQ90 795 aa18.39■□□□□ 0.53
SNAPC2-202ENST00000593598 PLEKHG2Q9H7P9 1386 aa18.39■□□□□ 0.53
SNAPC2-202ENST00000593598 CCDC125Q86Z20 511 aa18.38■□□□□ 0.53
SNAPC2-202ENST00000593598 BCL9O00512 1426 aa18.38■□□□□ 0.53
SNAPC2-202ENST00000593598 EP400Q96L91 3159 aa18.37■□□□□ 0.53
SNAPC2-202ENST00000593598 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
SNAPC2-202ENST00000593598 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
SNAPC2-202ENST00000593598 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
SNAPC2-202ENST00000593598 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
SNAPC2-202ENST00000593598 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNAPC2-202ENST00000593598 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
SNAPC2-202ENST00000593598 SHANK3Q9BYB0 1731 aa18.35■□□□□ 0.53
SNAPC2-202ENST00000593598 CYP27B1O15528 508 aa18.35■□□□□ 0.53
SNAPC2-202ENST00000593598 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
SNAPC2-202ENST00000593598 TRIM37O94972 964 aa18.34■□□□□ 0.53
SNAPC2-202ENST00000593598 FCHSD2O94868 740 aa18.33■□□□□ 0.52
SNAPC2-202ENST00000593598 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SNAPC2-202ENST00000593598 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
SNAPC2-202ENST00000593598 RSPH6AQ9H0K4 717 aa18.32■□□□□ 0.52
SNAPC2-202ENST00000593598 SBF2Q86WG5 1849 aa18.31■□□□□ 0.52
SNAPC2-202ENST00000593598 PHKG2P15735 406 aa18.31■□□□□ 0.52
SNAPC2-202ENST00000593598 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
SNAPC2-202ENST00000593598 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
SNAPC2-202ENST00000593598 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
SNAPC2-202ENST00000593598 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
SNAPC2-202ENST00000593598 ZNF530Q6P9A1 599 aaPredicted RBP18.3■□□□□ 0.52
SNAPC2-202ENST00000593598 KAT6BQ8WYB5 2073 aa18.29■□□□□ 0.52
SNAPC2-202ENST00000593598 KCNQ2O43526 872 aa18.29■□□□□ 0.52
SNAPC2-202ENST00000593598 APBA3O96018 575 aa18.28■□□□□ 0.52
SNAPC2-202ENST00000593598 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
SNAPC2-202ENST00000593598 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
SNAPC2-202ENST00000593598 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
SNAPC2-202ENST00000593598 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
SNAPC2-202ENST00000593598 BAG6P46379 1132 aa18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
SNAPC2-202ENST00000593598 SRCAPQ6ZRS2 3230 aa18.27■□□□□ 0.51
SNAPC2-202ENST00000593598 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
SNAPC2-202ENST00000593598 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
SNAPC2-202ENST00000593598 NEFMP07197 916 aa18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 TNS1Q9HBL0 1735 aaKnown RBP18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
SNAPC2-202ENST00000593598 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 PLSCR1O15162 318 aa18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
SNAPC2-202ENST00000593598 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
SNAPC2-202ENST00000593598 GNAT3A8MTJ3 354 aa18.21■□□□□ 0.51
SNAPC2-202ENST00000593598 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
SNAPC2-202ENST00000593598 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
SNAPC2-202ENST00000593598 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
SNAPC2-202ENST00000593598 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
SNAPC2-202ENST00000593598 RNMTO43148 476 aaKnown RBP18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 PIGBQ92521 554 aa18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 TMOD3Q9NYL9 352 aa18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 BTAF1O14981 1849 aa18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 ITGB4P16144 1822 aa18.19■□□□□ 0.5
SNAPC2-202ENST00000593598 MAP3K5Q99683 1374 aa18.18■□□□□ 0.5
SNAPC2-202ENST00000593598 CABP4P57796 275 aa18.18■□□□□ 0.5
SNAPC2-202ENST00000593598 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SNAPC2-202ENST00000593598 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
SNAPC2-202ENST00000593598 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
SNAPC2-202ENST00000593598 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
SNAPC2-202ENST00000593598 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
SNAPC2-202ENST00000593598 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
SNAPC2-202ENST00000593598 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
SNAPC2-202ENST00000593598 PROM2Q8N271 834 aa18.15■□□□□ 0.5
SNAPC2-202ENST00000593598 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
SNAPC2-202ENST00000593598 SLC52A2Q9HAB3 445 aa18.15■□□□□ 0.5
SNAPC2-202ENST00000593598 TXNRD1Q16881 649 aa18.14■□□□□ 0.49
SNAPC2-202ENST00000593598 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
SNAPC2-202ENST00000593598 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.49
SNAPC2-202ENST00000593598 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.49
SNAPC2-202ENST00000593598 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
SNAPC2-202ENST00000593598 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
SNAPC2-202ENST00000593598 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
SNAPC2-202ENST00000593598 VIRMAQ69YN4 1812 aaKnown RBP18.13■□□□□ 0.49
SNAPC2-202ENST00000593598 RIPK4P57078 832 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms