RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
USE1-203ENST00000593597 AKT1S1Q96B36 256 aa15.03■□□□□ -0
USE1-203ENST00000593597 GGNBP2Q9H3C7 697 aa15.03■□□□□ -0
USE1-203ENST00000593597 CHD4Q14839 1912 aa15.03■□□□□ -0
USE1-203ENST00000593597 KCNQ4P56696 695 aa15.02■□□□□ -0
USE1-203ENST00000593597 MTFR1LQ9H019 292 aa15.02■□□□□ -0
USE1-203ENST00000593597 C5P01031 1676 aa15.02□□□□□ -0.01
USE1-203ENST00000593597 GOLGB1Q14789 3259 aaKnown RBP15.02□□□□□ -0.01
USE1-203ENST00000593597 NBPF6Q5VWK0 638 aa15.01□□□□□ -0.01
USE1-203ENST00000593597 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
USE1-203ENST00000593597 NBPF4Q96M43 638 aa15.01□□□□□ -0.01
USE1-203ENST00000593597 FHDC1Q9C0D6 1143 aaPredicted RBP15.01□□□□□ -0.01
USE1-203ENST00000593597 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
USE1-203ENST00000593597 AMPHP49418 695 aa15□□□□□ -0.01
USE1-203ENST00000593597 PNPLA7Q6ZV29 1317 aa14.99□□□□□ -0.01
USE1-203ENST00000593597 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
USE1-203ENST00000593597 SYT17Q9BSW7 474 aa14.99□□□□□ -0.01
USE1-203ENST00000593597 CARD14Q9BXL6 1004 aa14.99□□□□□ -0.01
USE1-203ENST00000593597 NCAPD2Q15021 1401 aa14.99□□□□□ -0.01
USE1-203ENST00000593597 TMF1P82094 1093 aa14.98□□□□□ -0.01
USE1-203ENST00000593597 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
USE1-203ENST00000593597 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
USE1-203ENST00000593597 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
USE1-203ENST00000593597 HSP90AB2PQ58FF8 381 aa14.97□□□□□ -0.01
USE1-203ENST00000593597 ZCRB1Q8TBF4 217 aaKnown RBP14.97□□□□□ -0.01
USE1-203ENST00000593597 INSRP06213 1382 aa14.97□□□□□ -0.01
USE1-203ENST00000593597 SLC27A3Q5K4L6 730 aa14.96□□□□□ -0.01
USE1-203ENST00000593597 FLT4P35916 1363 aa14.96□□□□□ -0.02
USE1-203ENST00000593597 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
USE1-203ENST00000593597 ARXQ96QS3 562 aa14.95□□□□□ -0.02
USE1-203ENST00000593597 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
USE1-203ENST00000593597 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
USE1-203ENST00000593597 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
USE1-203ENST00000593597 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
USE1-203ENST00000593597 C4BP0C0L5 1744 aa14.93□□□□□ -0.02
USE1-203ENST00000593597 KIF24Q5T7B8 1368 aa14.93□□□□□ -0.02
USE1-203ENST00000593597 CYP27B1O15528 508 aa14.92□□□□□ -0.02
USE1-203ENST00000593597 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
USE1-203ENST00000593597 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
USE1-203ENST00000593597 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
USE1-203ENST00000593597 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 COL23A1Q86Y22 540 aaPredicted RBP14.89□□□□□ -0.03
USE1-203ENST00000593597 ZNF784Q8NCA9 323 aaPredicted RBP14.89□□□□□ -0.03
USE1-203ENST00000593597 NLGN2Q8NFZ4 835 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 SLC16A10Q8TF71 515 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 TFCP2L1Q9NZI6 479 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 PCDH11XQ9BZA7 1347 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 PCDH11YQ9BZA8 1340 aa14.89□□□□□ -0.03
USE1-203ENST00000593597 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
USE1-203ENST00000593597 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
USE1-203ENST00000593597 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
USE1-203ENST00000593597 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
USE1-203ENST00000593597 EYA1Q99502 592 aa14.85□□□□□ -0.03
USE1-203ENST00000593597 POLKQ9UBT6 870 aa14.85□□□□□ -0.03
USE1-203ENST00000593597 WASHC2AQ641Q2 1341 aa14.85□□□□□ -0.03
USE1-203ENST00000593597 COL5A3P25940 1745 aaPredicted RBP14.84□□□□□ -0.03
USE1-203ENST00000593597 MSL1Q68DK7 614 aa14.84□□□□□ -0.03
USE1-203ENST00000593597 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
USE1-203ENST00000593597 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
USE1-203ENST00000593597 KIAA1551Q9HCM1 1747 aa14.83□□□□□ -0.03
USE1-203ENST00000593597 POLD1P28340 1107 aa14.83□□□□□ -0.04
USE1-203ENST00000593597 NKX1-1Q15270 411 aaPredicted RBP14.83□□□□□ -0.04
USE1-203ENST00000593597 PIGBQ92521 554 aa14.83□□□□□ -0.04
USE1-203ENST00000593597 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
USE1-203ENST00000593597 PPM1GO15355 546 aaPredicted RBP14.82□□□□□ -0.04
USE1-203ENST00000593597 YBX3P16989 372 aaKnown RBP eCLIP14.82□□□□□ -0.04
USE1-203ENST00000593597 TIMELESSQ9UNS1 1208 aa14.82□□□□□ -0.04
USE1-203ENST00000593597 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
USE1-203ENST00000593597 GPR162Q16538 588 aa14.8□□□□□ -0.04
USE1-203ENST00000593597 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
USE1-203ENST00000593597 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
USE1-203ENST00000593597 KIF13BQ9NQT8 1826 aa14.8□□□□□ -0.04
USE1-203ENST00000593597 MSH5O43196 834 aa14.79□□□□□ -0.04
USE1-203ENST00000593597 C4AP0C0L4 1744 aa14.79□□□□□ -0.04
USE1-203ENST00000593597 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
USE1-203ENST00000593597 KDRP35968 1356 aa14.79□□□□□ -0.04
USE1-203ENST00000593597 LINC00116Q8NCU8 138 aa14.79□□□□□ -0.04
USE1-203ENST00000593597 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
USE1-203ENST00000593597 PHKG2P15735 406 aa14.78□□□□□ -0.04
USE1-203ENST00000593597 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
USE1-203ENST00000593597 ITPK1Q13572 414 aa14.78□□□□□ -0.04
USE1-203ENST00000593597 PCGF6Q9BYE7 350 aa14.78□□□□□ -0.04
USE1-203ENST00000593597 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
USE1-203ENST00000593597 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.04
USE1-203ENST00000593597 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
USE1-203ENST00000593597 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.05
USE1-203ENST00000593597 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
USE1-203ENST00000593597 TJP1Q07157 1748 aa14.77□□□□□ -0.05
USE1-203ENST00000593597 SCN11AQ9UI33 1791 aa14.76□□□□□ -0.05
USE1-203ENST00000593597 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
USE1-203ENST00000593597 SIK1P57059 783 aa14.76□□□□□ -0.05
USE1-203ENST00000593597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.05
USE1-203ENST00000593597 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
USE1-203ENST00000593597 N4BP2Q86UW6 1770 aaPredicted RBP14.75□□□□□ -0.05
USE1-203ENST00000593597 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
USE1-203ENST00000593597 PHF14O94880 888 aa14.75□□□□□ -0.05
USE1-203ENST00000593597 SMARCC1Q92922 1105 aaPredicted RBP14.75□□□□□ -0.05
USE1-203ENST00000593597 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
USE1-203ENST00000593597 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms