RNA–Protein interactions for RNA: ENST00000593383.1

SHD-202, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-202ENST00000593383 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
SHD-202ENST00000593383 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
SHD-202ENST00000593383 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
SHD-202ENST00000593383 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
SHD-202ENST00000593383 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
SHD-202ENST00000593383 IFFO2Q5TF58 517 aa16.84■□□□□ 0.29
SHD-202ENST00000593383 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
SHD-202ENST00000593383 USP47Q96K76 1375 aa16.83■□□□□ 0.28
SHD-202ENST00000593383 CCNL1Q9UK58 526 aaPredicted RBP16.83■□□□□ 0.28
SHD-202ENST00000593383 LY75O60449 1722 aa16.82■□□□□ 0.28
SHD-202ENST00000593383 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
SHD-202ENST00000593383 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
SHD-202ENST00000593383 NLGN2Q8NFZ4 835 aa16.81■□□□□ 0.28
SHD-202ENST00000593383 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
SHD-202ENST00000593383 DOT1LQ8TEK3 1739 aa16.8■□□□□ 0.28
SHD-202ENST00000593383 SHANK3Q9BYB0 1731 aa16.8■□□□□ 0.28
SHD-202ENST00000593383 MSH5O43196 834 aa16.8■□□□□ 0.28
SHD-202ENST00000593383 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
SHD-202ENST00000593383 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
SHD-202ENST00000593383 COG3Q96JB2 828 aa16.8■□□□□ 0.28
SHD-202ENST00000593383 AMPHP49418 695 aa16.79■□□□□ 0.28
SHD-202ENST00000593383 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
SHD-202ENST00000593383 NSD2O96028 1365 aa16.78■□□□□ 0.28
SHD-202ENST00000593383 HOXC9P31274 260 aa16.78■□□□□ 0.28
SHD-202ENST00000593383 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
SHD-202ENST00000593383 RTL1A6NKG5 1358 aa16.77■□□□□ 0.28
SHD-202ENST00000593383 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHD-202ENST00000593383 FBLN1P23142 703 aa16.77■□□□□ 0.28
SHD-202ENST00000593383 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.28
SHD-202ENST00000593383 MAP3K19Q56UN5 1328 aa16.76■□□□□ 0.27
SHD-202ENST00000593383 KCNQ4P56696 695 aa16.76■□□□□ 0.27
SHD-202ENST00000593383 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
SHD-202ENST00000593383 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
SHD-202ENST00000593383 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
SHD-202ENST00000593383 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
SHD-202ENST00000593383 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
SHD-202ENST00000593383 MEGF6O75095 1541 aa16.74■□□□□ 0.27
SHD-202ENST00000593383 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
SHD-202ENST00000593383 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
SHD-202ENST00000593383 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
SHD-202ENST00000593383 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
SHD-202ENST00000593383 C5P01031 1676 aa16.72■□□□□ 0.27
SHD-202ENST00000593383 TMF1P82094 1093 aa16.71■□□□□ 0.27
SHD-202ENST00000593383 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
SHD-202ENST00000593383 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
SHD-202ENST00000593383 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
SHD-202ENST00000593383 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
SHD-202ENST00000593383 ADCY9O60503 1353 aa16.69■□□□□ 0.26
SHD-202ENST00000593383 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
SHD-202ENST00000593383 HSPA6P17066 643 aa16.69■□□□□ 0.26
SHD-202ENST00000593383 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
SHD-202ENST00000593383 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
SHD-202ENST00000593383 FYB1O15117 783 aa16.68■□□□□ 0.26
SHD-202ENST00000593383 AK7Q96M32 723 aa16.68■□□□□ 0.26
SHD-202ENST00000593383 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
SHD-202ENST00000593383 GOLGB1Q14789 3259 aaKnown RBP16.68■□□□□ 0.26
SHD-202ENST00000593383 ANKRD26Q9UPS8 1709 aa16.67■□□□□ 0.26
SHD-202ENST00000593383 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
SHD-202ENST00000593383 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
SHD-202ENST00000593383 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
SHD-202ENST00000593383 INSRP06213 1382 aa16.66■□□□□ 0.26
SHD-202ENST00000593383 MPRIPQ6WCQ1 1025 aa16.66■□□□□ 0.26
SHD-202ENST00000593383 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
SHD-202ENST00000593383 FLT4P35916 1363 aa16.64■□□□□ 0.26
SHD-202ENST00000593383 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
SHD-202ENST00000593383 SSFA2P28290 1259 aa16.64■□□□□ 0.25
SHD-202ENST00000593383 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
SHD-202ENST00000593383 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
SHD-202ENST00000593383 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
SHD-202ENST00000593383 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
SHD-202ENST00000593383 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
SHD-202ENST00000593383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.61■□□□□ 0.25
SHD-202ENST00000593383 CYP27B1O15528 508 aa16.6■□□□□ 0.25
SHD-202ENST00000593383 PHF14O94880 888 aa16.6■□□□□ 0.25
SHD-202ENST00000593383 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
SHD-202ENST00000593383 SPG7Q9UQ90 795 aa16.6■□□□□ 0.25
SHD-202ENST00000593383 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
SHD-202ENST00000593383 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
SHD-202ENST00000593383 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
SHD-202ENST00000593383 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
SHD-202ENST00000593383 APLP1P51693 650 aa16.58■□□□□ 0.24
SHD-202ENST00000593383 PIGBQ92521 554 aa16.58■□□□□ 0.24
SHD-202ENST00000593383 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
SHD-202ENST00000593383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHD-202ENST00000593383 UBR3Q6ZT12 1888 aa16.58■□□□□ 0.24
SHD-202ENST00000593383 ITGB4P16144 1822 aa16.57■□□□□ 0.24
SHD-202ENST00000593383 CICQ96RK0 1608 aaPredicted RBP16.57■□□□□ 0.24
SHD-202ENST00000593383 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
SHD-202ENST00000593383 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
SHD-202ENST00000593383 SIK1P57059 783 aa16.57■□□□□ 0.24
SHD-202ENST00000593383 KIF3CO14782 793 aa16.56■□□□□ 0.24
SHD-202ENST00000593383 TGFB2P61812 414 aa16.56■□□□□ 0.24
SHD-202ENST00000593383 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
SHD-202ENST00000593383 EMILIN1Q9Y6C2 1016 aa16.56■□□□□ 0.24
SHD-202ENST00000593383 TOMM70O94826 608 aa16.55■□□□□ 0.24
SHD-202ENST00000593383 CEP350Q5VT06 3117 aa16.55■□□□□ 0.24
SHD-202ENST00000593383 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
SHD-202ENST00000593383 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
SHD-202ENST00000593383 GNPATO15228 680 aa16.54■□□□□ 0.24
SHD-202ENST00000593383 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms