RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
CACNA1A-212ENST00000593160 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
CACNA1A-212ENST00000593160 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
CACNA1A-212ENST00000593160 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-212ENST00000593160 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-212ENST00000593160 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-212ENST00000593160 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
CACNA1A-212ENST00000593160 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
CACNA1A-212ENST00000593160 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
CACNA1A-212ENST00000593160 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-212ENST00000593160 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
CACNA1A-212ENST00000593160 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 MEGF6O75095 1541 aa16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 CHL1O00533 1208 aa16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
CACNA1A-212ENST00000593160 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
CACNA1A-212ENST00000593160 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-212ENST00000593160 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
CACNA1A-212ENST00000593160 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-212ENST00000593160 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
CACNA1A-212ENST00000593160 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-212ENST00000593160 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 NLRP2Q9NX02 1062 aa16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-212ENST00000593160 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 VAMP4O75379 141 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 ALDH1L2Q3SY69 923 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
CACNA1A-212ENST00000593160 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
CACNA1A-212ENST00000593160 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
CACNA1A-212ENST00000593160 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-212ENST00000593160 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
CACNA1A-212ENST00000593160 TOM1O60784 492 aa16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-212ENST00000593160 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.22
CACNA1A-212ENST00000593160 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
CACNA1A-212ENST00000593160 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
CACNA1A-212ENST00000593160 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
CACNA1A-212ENST00000593160 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
CACNA1A-212ENST00000593160 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
CACNA1A-212ENST00000593160 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
CACNA1A-212ENST00000593160 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 RLBP1P12271 317 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 LGR6Q9HBX8 967 aa16.37■□□□□ 0.21
CACNA1A-212ENST00000593160 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
CACNA1A-212ENST00000593160 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-212ENST00000593160 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-212ENST00000593160 MRC1P22897 1456 aa16.36■□□□□ 0.21
CACNA1A-212ENST00000593160 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-212ENST00000593160 TRIM27P14373 513 aa16.35■□□□□ 0.21
CACNA1A-212ENST00000593160 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
CACNA1A-212ENST00000593160 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-212ENST00000593160 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 SPG7Q9UQ90 795 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
CACNA1A-212ENST00000593160 PHKG2P15735 406 aa16.33■□□□□ 0.2
CACNA1A-212ENST00000593160 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-212ENST00000593160 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
CACNA1A-212ENST00000593160 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
CACNA1A-212ENST00000593160 NWD2Q9ULI1 1742 aa16.32■□□□□ 0.2
CACNA1A-212ENST00000593160 MS4A1P11836 297 aa16.31■□□□□ 0.2
CACNA1A-212ENST00000593160 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
CACNA1A-212ENST00000593160 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 CYP27B1O15528 508 aa16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 TEFQ10587 303 aa16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-212ENST00000593160 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms