RNA–Protein interactions for RNA: ENST00000593136.2

RAVER1-205, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 5

Gene RAVER1, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-205ENST00000593136 RAPGEF4Q8WZA2 1011 aa18.71■□□□□ 0.59
RAVER1-205ENST00000593136 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.59
RAVER1-205ENST00000593136 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
RAVER1-205ENST00000593136 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
RAVER1-205ENST00000593136 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
RAVER1-205ENST00000593136 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
RAVER1-205ENST00000593136 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
RAVER1-205ENST00000593136 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
RAVER1-205ENST00000593136 LRRC4BQ9NT99 713 aa18.69■□□□□ 0.58
RAVER1-205ENST00000593136 KAT6BQ8WYB5 2073 aa18.69■□□□□ 0.58
RAVER1-205ENST00000593136 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
RAVER1-205ENST00000593136 TATP17735 454 aaPredicted RBP18.68■□□□□ 0.58
RAVER1-205ENST00000593136 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
RAVER1-205ENST00000593136 WASHC2AQ641Q2 1341 aa18.68■□□□□ 0.58
RAVER1-205ENST00000593136 NSD2O96028 1365 aa18.68■□□□□ 0.58
RAVER1-205ENST00000593136 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
RAVER1-205ENST00000593136 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
RAVER1-205ENST00000593136 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
RAVER1-205ENST00000593136 ZBTB7AO95365 584 aa18.66■□□□□ 0.58
RAVER1-205ENST00000593136 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
RAVER1-205ENST00000593136 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
RAVER1-205ENST00000593136 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
RAVER1-205ENST00000593136 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
RAVER1-205ENST00000593136 PTGER2P43116 358 aa18.65■□□□□ 0.58
RAVER1-205ENST00000593136 MTFR1LQ9H019 292 aa18.65■□□□□ 0.58
RAVER1-205ENST00000593136 POLKQ9UBT6 870 aa18.65■□□□□ 0.58
RAVER1-205ENST00000593136 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
RAVER1-205ENST00000593136 AKT1S1Q96B36 256 aa18.64■□□□□ 0.57
RAVER1-205ENST00000593136 PANK3Q9H999 370 aa18.64■□□□□ 0.57
RAVER1-205ENST00000593136 SGIP1Q9BQI5 828 aa18.62■□□□□ 0.57
RAVER1-205ENST00000593136 ATF5Q9Y2D1 282 aaPredicted RBP18.62■□□□□ 0.57
RAVER1-205ENST00000593136 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
RAVER1-205ENST00000593136 LY75O60449 1722 aa18.61■□□□□ 0.57
RAVER1-205ENST00000593136 CYP27B1O15528 508 aa18.61■□□□□ 0.57
RAVER1-205ENST00000593136 EYA1Q99502 592 aa18.6■□□□□ 0.57
RAVER1-205ENST00000593136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.6■□□□□ 0.57
RAVER1-205ENST00000593136 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
RAVER1-205ENST00000593136 PLEKHG2Q9H7P9 1386 aa18.58■□□□□ 0.57
RAVER1-205ENST00000593136 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
RAVER1-205ENST00000593136 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
RAVER1-205ENST00000593136 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
RAVER1-205ENST00000593136 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
RAVER1-205ENST00000593136 SPG7Q9UQ90 795 aa18.58■□□□□ 0.56
RAVER1-205ENST00000593136 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
RAVER1-205ENST00000593136 KCNQ4P56696 695 aa18.57■□□□□ 0.56
RAVER1-205ENST00000593136 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
RAVER1-205ENST00000593136 UTRNP46939 3433 aa18.57■□□□□ 0.56
RAVER1-205ENST00000593136 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
RAVER1-205ENST00000593136 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
RAVER1-205ENST00000593136 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
RAVER1-205ENST00000593136 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
RAVER1-205ENST00000593136 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
RAVER1-205ENST00000593136 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
RAVER1-205ENST00000593136 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
RAVER1-205ENST00000593136 PALLDQ8WX93 1383 aa18.54■□□□□ 0.56
RAVER1-205ENST00000593136 IGSF1Q8N6C5 1336 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 MORC1Q86VD1 984 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 ARXQ96QS3 562 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 SYT17Q9BSW7 474 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
RAVER1-205ENST00000593136 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
RAVER1-205ENST00000593136 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
RAVER1-205ENST00000593136 PHKG2P15735 406 aa18.51■□□□□ 0.55
RAVER1-205ENST00000593136 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
RAVER1-205ENST00000593136 PIGBQ92521 554 aa18.51■□□□□ 0.55
RAVER1-205ENST00000593136 COL24A1Q17RW2 1714 aa18.5■□□□□ 0.55
RAVER1-205ENST00000593136 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
RAVER1-205ENST00000593136 ITGB4P16144 1822 aa18.5■□□□□ 0.55
RAVER1-205ENST00000593136 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
RAVER1-205ENST00000593136 C5P01031 1676 aa18.48■□□□□ 0.55
RAVER1-205ENST00000593136 POLD1P28340 1107 aa18.48■□□□□ 0.55
RAVER1-205ENST00000593136 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
RAVER1-205ENST00000593136 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
RAVER1-205ENST00000593136 YY1P25490 414 aa18.46■□□□□ 0.55
RAVER1-205ENST00000593136 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
RAVER1-205ENST00000593136 GOLGB1Q14789 3259 aaKnown RBP18.46■□□□□ 0.55
RAVER1-205ENST00000593136 TAF1LQ8IZX4 1826 aa18.45■□□□□ 0.54
RAVER1-205ENST00000593136 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
RAVER1-205ENST00000593136 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
RAVER1-205ENST00000593136 PLEKHO1Q53GL0 409 aaPredicted RBP18.45■□□□□ 0.54
RAVER1-205ENST00000593136 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
RAVER1-205ENST00000593136 KDRP35968 1356 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 ERVV-2B6SEH9 535 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 IL13P35225 146 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 SIK1P57059 783 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
RAVER1-205ENST00000593136 MSH5O43196 834 aa18.42■□□□□ 0.54
RAVER1-205ENST00000593136 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
RAVER1-205ENST00000593136 AK7Q96M32 723 aa18.41■□□□□ 0.54
RAVER1-205ENST00000593136 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
RAVER1-205ENST00000593136 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
RAVER1-205ENST00000593136 ZNF530Q6P9A1 599 aaPredicted RBP18.4■□□□□ 0.54
RAVER1-205ENST00000593136 MTHFSP49914 203 aa18.39■□□□□ 0.53
RAVER1-205ENST00000593136 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
RAVER1-205ENST00000593136 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
RAVER1-205ENST00000593136 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms