RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 ANKRD36BQ8N2N9 1353 aa24.52■■□□□ 1.52
PSME3-216ENST00000593111 RRS1Q15050 365 aaKnown RBP24.51■■□□□ 1.51
PSME3-216ENST00000593111 PNPLA7Q6ZV29 1317 aa24.51■■□□□ 1.51
PSME3-216ENST00000593111 MAP3K5Q99683 1374 aa24.5■■□□□ 1.51
PSME3-216ENST00000593111 NBPF6Q5VWK0 638 aa24.49■■□□□ 1.51
PSME3-216ENST00000593111 NBPF4Q96M43 638 aa24.49■■□□□ 1.51
PSME3-216ENST00000593111 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
PSME3-216ENST00000593111 FYB1O15117 783 aa24.48■■□□□ 1.51
PSME3-216ENST00000593111 MSH5O43196 834 aa24.48■■□□□ 1.51
PSME3-216ENST00000593111 RGPD2P0DJD1 1756 aa24.48■■□□□ 1.51
PSME3-216ENST00000593111 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
PSME3-216ENST00000593111 USHBP1Q8N6Y0 703 aa24.48■■□□□ 1.51
PSME3-216ENST00000593111 CCNL1Q9UK58 526 aaPredicted RBP24.48■■□□□ 1.51
PSME3-216ENST00000593111 RAPGEF4Q8WZA2 1011 aa24.47■■□□□ 1.51
PSME3-216ENST00000593111 CHD4Q14839 1912 aa24.46■■□□□ 1.51
PSME3-216ENST00000593111 TMF1P82094 1093 aa24.46■■□□□ 1.51
PSME3-216ENST00000593111 MEGF6O75095 1541 aa24.45■■□□□ 1.51
PSME3-216ENST00000593111 NSD2O96028 1365 aa24.45■■□□□ 1.5
PSME3-216ENST00000593111 DOT1LQ8TEK3 1739 aa24.45■■□□□ 1.5
PSME3-216ENST00000593111 RTL1A6NKG5 1358 aa24.44■■□□□ 1.5
PSME3-216ENST00000593111 USP47Q96K76 1375 aa24.44■■□□□ 1.5
PSME3-216ENST00000593111 TATP17735 454 aaPredicted RBP24.44■■□□□ 1.5
PSME3-216ENST00000593111 CGNL1Q0VF96 1302 aa24.43■■□□□ 1.5
PSME3-216ENST00000593111 QSER1Q2KHR3 1735 aa24.43■■□□□ 1.5
PSME3-216ENST00000593111 SMG6Q86US8 1419 aaKnown RBP24.43■■□□□ 1.5
PSME3-216ENST00000593111 HSP90AB2PQ58FF8 381 aa24.41■■□□□ 1.5
PSME3-216ENST00000593111 NLGN2Q8NFZ4 835 aa24.4■■□□□ 1.5
PSME3-216ENST00000593111 LY75O60449 1722 aa24.4■■□□□ 1.5
PSME3-216ENST00000593111 SHANK3Q9BYB0 1731 aa24.4■■□□□ 1.5
PSME3-216ENST00000593111 COL23A1Q86Y22 540 aaPredicted RBP24.39■■□□□ 1.49
PSME3-216ENST00000593111 TUBGCP6Q96RT7 1819 aa24.39■■□□□ 1.49
PSME3-216ENST00000593111 CDCA8Q53HL2 280 aa24.37■■□□□ 1.49
PSME3-216ENST00000593111 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
PSME3-216ENST00000593111 INSRP06213 1382 aa24.37■■□□□ 1.49
PSME3-216ENST00000593111 C1QTNF8P60827 252 aa24.36■■□□□ 1.49
PSME3-216ENST00000593111 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
PSME3-216ENST00000593111 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
PSME3-216ENST00000593111 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
PSME3-216ENST00000593111 SENP3-EIF4A1A0A087X0R7 540 aa24.35■■□□□ 1.49
PSME3-216ENST00000593111 MSL1Q68DK7 614 aa24.35■■□□□ 1.49
PSME3-216ENST00000593111 FLT4P35916 1363 aa24.33■■□□□ 1.49
PSME3-216ENST00000593111 HMGB2P26583 209 aaKnown RBP24.33■■□□□ 1.49
PSME3-216ENST00000593111 GOLGB1Q14789 3259 aaKnown RBP24.32■■□□□ 1.48
PSME3-216ENST00000593111 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
PSME3-216ENST00000593111 CYP27B1O15528 508 aa24.31■■□□□ 1.48
PSME3-216ENST00000593111 CARD14Q9BXL6 1004 aa24.31■■□□□ 1.48
PSME3-216ENST00000593111 PALLDQ8WX93 1383 aa24.3■■□□□ 1.48
PSME3-216ENST00000593111 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
PSME3-216ENST00000593111 FLAD1Q8NFF5 587 aa24.3■■□□□ 1.48
PSME3-216ENST00000593111 EMILIN1Q9Y6C2 1016 aa24.3■■□□□ 1.48
PSME3-216ENST00000593111 KIF24Q5T7B8 1368 aa24.29■■□□□ 1.48
PSME3-216ENST00000593111 KIF20BQ96Q89 1820 aa24.29■■□□□ 1.48
PSME3-216ENST00000593111 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.48
PSME3-216ENST00000593111 GIGYF1O75420 1035 aaPredicted RBP24.28■■□□□ 1.48
PSME3-216ENST00000593111 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
PSME3-216ENST00000593111 AK7Q96M32 723 aa24.26■■□□□ 1.47
PSME3-216ENST00000593111 SPG7Q9UQ90 795 aa24.26■■□□□ 1.47
PSME3-216ENST00000593111 C5P01031 1676 aa24.26■■□□□ 1.47
PSME3-216ENST00000593111 NSD3Q9BZ95 1437 aa24.25■■□□□ 1.47
PSME3-216ENST00000593111 PIGBQ92521 554 aa24.24■■□□□ 1.47
PSME3-216ENST00000593111 CD2APQ9Y5K6 639 aa24.24■■□□□ 1.47
PSME3-216ENST00000593111 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
PSME3-216ENST00000593111 PHF14O94880 888 aa24.22■■□□□ 1.47
PSME3-216ENST00000593111 SMIM5Q71RC9 77 aa24.21■■□□□ 1.47
PSME3-216ENST00000593111 WASHC2AQ641Q2 1341 aa24.2■■□□□ 1.46
PSME3-216ENST00000593111 ITGB4P16144 1822 aa24.2■■□□□ 1.46
PSME3-216ENST00000593111 TAF1LQ8IZX4 1826 aa24.2■■□□□ 1.46
PSME3-216ENST00000593111 NKX1-1Q15270 411 aaPredicted RBP24.2■■□□□ 1.46
PSME3-216ENST00000593111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.19■■□□□ 1.46
PSME3-216ENST00000593111 EYA1Q99502 592 aa24.19■■□□□ 1.46
PSME3-216ENST00000593111 POLR3GLQ9BT43 218 aa24.19■■□□□ 1.46
PSME3-216ENST00000593111 TMOD3Q9NYL9 352 aa24.19■■□□□ 1.46
PSME3-216ENST00000593111 AMIGO3Q86WK7 504 aa24.18■■□□□ 1.46
PSME3-216ENST00000593111 C4BP0C0L5 1744 aa24.18■■□□□ 1.46
PSME3-216ENST00000593111 TOGARAM1Q9Y4F4 1720 aa24.18■■□□□ 1.46
PSME3-216ENST00000593111 LOC102724428A0A0B4J2F2 783 aa24.17■■□□□ 1.46
PSME3-216ENST00000593111 SIK1P57059 783 aa24.17■■□□□ 1.46
PSME3-216ENST00000593111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.16■■□□□ 1.464e-7■■■■□ 19.4
PSME3-216ENST00000593111 PKD1L3Q7Z443 1732 aa24.15■■□□□ 1.46
PSME3-216ENST00000593111 TNNT2P45379 298 aaPredicted RBP24.15■■□□□ 1.46
PSME3-216ENST00000593111 IFNL2Q8IZJ0 200 aa24.15■■□□□ 1.46
PSME3-216ENST00000593111 LINC00116Q8NCU8 138 aa24.15■■□□□ 1.46
PSME3-216ENST00000593111 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
PSME3-216ENST00000593111 ASAP1Q9ULH1 1129 aa24.15■■□□□ 1.46
PSME3-216ENST00000593111 WWC3Q9ULE0 1092 aa24.14■■□□□ 1.45
PSME3-216ENST00000593111 NCAPD2Q15021 1401 aa24.13■■□□□ 1.45
PSME3-216ENST00000593111 MAP2P11137 1827 aaKnown RBP24.13■■□□□ 1.45
PSME3-216ENST00000593111 PHKG2P15735 406 aa24.13■■□□□ 1.45
PSME3-216ENST00000593111 SSFA2P28290 1259 aa24.13■■□□□ 1.45
PSME3-216ENST00000593111 ATP6V1AP38606 617 aa24.13■■□□□ 1.45
PSME3-216ENST00000593111 GNPATO15228 680 aa24.12■■□□□ 1.45
PSME3-216ENST00000593111 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
PSME3-216ENST00000593111 ITPK1Q13572 414 aa24.11■■□□□ 1.45
PSME3-216ENST00000593111 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
PSME3-216ENST00000593111 IGSF1Q8N6C5 1336 aa24.1■■□□□ 1.45
PSME3-216ENST00000593111 EIF4A2Q14240 407 aaKnown RBP24.1■■□□□ 1.45
PSME3-216ENST00000593111 GPBP1L1Q9HC44 474 aaPredicted RBP24.1■■□□□ 1.45
PSME3-216ENST00000593111 UBR3Q6ZT12 1888 aa24.1■■□□□ 1.45
PSME3-216ENST00000593111 ZNF526Q8TF50 670 aaPredicted RBP24.09■■□□□ 1.45
PSME3-216ENST00000593111 ATG3Q9NT62 314 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms