RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
PRKCSH-220ENST00000593104 COG3Q96JB2 828 aa15.84■□□□□ 0.13
PRKCSH-220ENST00000593104 NLGN2Q8NFZ4 835 aa15.83■□□□□ 0.12
PRKCSH-220ENST00000593104 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
PRKCSH-220ENST00000593104 LY75O60449 1722 aa15.82■□□□□ 0.12
PRKCSH-220ENST00000593104 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
PRKCSH-220ENST00000593104 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
PRKCSH-220ENST00000593104 GPR162Q16538 588 aa15.81■□□□□ 0.12
PRKCSH-220ENST00000593104 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
PRKCSH-220ENST00000593104 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
PRKCSH-220ENST00000593104 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
PRKCSH-220ENST00000593104 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
PRKCSH-220ENST00000593104 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
PRKCSH-220ENST00000593104 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
PRKCSH-220ENST00000593104 UTRNP46939 3433 aa15.8■□□□□ 0.12
PRKCSH-220ENST00000593104 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
PRKCSH-220ENST00000593104 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
PRKCSH-220ENST00000593104 CCNL1Q9UK58 526 aaPredicted RBP15.79■□□□□ 0.12
PRKCSH-220ENST00000593104 FYB1O15117 783 aa15.78■□□□□ 0.12
PRKCSH-220ENST00000593104 PUS7Q96PZ0 661 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-220ENST00000593104 MSH5O43196 834 aa15.77■□□□□ 0.12
PRKCSH-220ENST00000593104 POLD1P28340 1107 aa15.77■□□□□ 0.12
PRKCSH-220ENST00000593104 SMIM5Q71RC9 77 aa15.77■□□□□ 0.12
PRKCSH-220ENST00000593104 COL23A1Q86Y22 540 aaPredicted RBP15.77■□□□□ 0.12
PRKCSH-220ENST00000593104 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
PRKCSH-220ENST00000593104 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
PRKCSH-220ENST00000593104 TOGARAM1Q9Y4F4 1720 aa15.75■□□□□ 0.11
PRKCSH-220ENST00000593104 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.114e-10■■□□□ 13.8
PRKCSH-220ENST00000593104 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
PRKCSH-220ENST00000593104 KIF20BQ96Q89 1820 aa15.75■□□□□ 0.11
PRKCSH-220ENST00000593104 C1QTNF8P60827 252 aa15.74■□□□□ 0.11
PRKCSH-220ENST00000593104 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
PRKCSH-220ENST00000593104 USP47Q96K76 1375 aa15.74■□□□□ 0.11
PRKCSH-220ENST00000593104 C5P01031 1676 aa15.73■□□□□ 0.11
PRKCSH-220ENST00000593104 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
PRKCSH-220ENST00000593104 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
PRKCSH-220ENST00000593104 MPRIPQ6WCQ1 1025 aa15.72■□□□□ 0.11
PRKCSH-220ENST00000593104 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
PRKCSH-220ENST00000593104 TAF1LQ8IZX4 1826 aa15.72■□□□□ 0.11
PRKCSH-220ENST00000593104 ITGB4P16144 1822 aa15.71■□□□□ 0.11
PRKCSH-220ENST00000593104 CYP27B1O15528 508 aa15.71■□□□□ 0.11
PRKCSH-220ENST00000593104 TATP17735 454 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-220ENST00000593104 EMILIN1Q9Y6C2 1016 aa15.71■□□□□ 0.11
PRKCSH-220ENST00000593104 TMF1P82094 1093 aa15.7■□□□□ 0.1
PRKCSH-220ENST00000593104 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
PRKCSH-220ENST00000593104 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
PRKCSH-220ENST00000593104 SMG6Q86US8 1419 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-220ENST00000593104 INSRP06213 1382 aa15.69■□□□□ 0.1
PRKCSH-220ENST00000593104 FLT4P35916 1363 aa15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 PHF14O94880 888 aa15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 NSD3Q9BZ95 1437 aa15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
PRKCSH-220ENST00000593104 GIGYF1O75420 1035 aaPredicted RBP15.67■□□□□ 0.1
PRKCSH-220ENST00000593104 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
PRKCSH-220ENST00000593104 PKD1L3Q7Z443 1732 aa15.66■□□□□ 0.1
PRKCSH-220ENST00000593104 PIGBQ92521 554 aa15.65■□□□□ 0.1
PRKCSH-220ENST00000593104 UBR3Q6ZT12 1888 aa15.65■□□□□ 0.1
PRKCSH-220ENST00000593104 CGNL1Q0VF96 1302 aa15.65■□□□□ 0.1
PRKCSH-220ENST00000593104 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-220ENST00000593104 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
PRKCSH-220ENST00000593104 AK7Q96M32 723 aa15.63■□□□□ 0.09
PRKCSH-220ENST00000593104 MAP2P11137 1827 aaKnown RBP15.63■□□□□ 0.09
PRKCSH-220ENST00000593104 ATP10DQ9P241 1426 aa15.62■□□□□ 0.09
PRKCSH-220ENST00000593104 ZNF526Q8TF50 670 aaPredicted RBP15.62■□□□□ 0.09
PRKCSH-220ENST00000593104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.61■□□□□ 0.09
PRKCSH-220ENST00000593104 EYA1Q99502 592 aa15.61■□□□□ 0.09
PRKCSH-220ENST00000593104 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
PRKCSH-220ENST00000593104 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
PRKCSH-220ENST00000593104 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
PRKCSH-220ENST00000593104 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
PRKCSH-220ENST00000593104 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
PRKCSH-220ENST00000593104 ITPK1Q13572 414 aa15.6■□□□□ 0.09
PRKCSH-220ENST00000593104 GRIN3BO60391 1043 aa15.59■□□□□ 0.09
PRKCSH-220ENST00000593104 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
PRKCSH-220ENST00000593104 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
PRKCSH-220ENST00000593104 IGSF1Q8N6C5 1336 aa15.59■□□□□ 0.09
PRKCSH-220ENST00000593104 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
PRKCSH-220ENST00000593104 SIK1P57059 783 aa15.58■□□□□ 0.08
PRKCSH-220ENST00000593104 SMARCC1Q92922 1105 aaPredicted RBP15.58■□□□□ 0.08
PRKCSH-220ENST00000593104 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.08
PRKCSH-220ENST00000593104 GNPATO15228 680 aa15.57■□□□□ 0.08
PRKCSH-220ENST00000593104 NKX1-1Q15270 411 aaPredicted RBP15.57■□□□□ 0.08
PRKCSH-220ENST00000593104 POLKQ9UBT6 870 aa15.57■□□□□ 0.08
PRKCSH-220ENST00000593104 PHKG2P15735 406 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 FLAD1Q8NFF5 587 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 TMOD3Q9NYL9 352 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 SPG7Q9UQ90 795 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
PRKCSH-220ENST00000593104 ADCY9O60503 1353 aa15.55■□□□□ 0.08
PRKCSH-220ENST00000593104 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
PRKCSH-220ENST00000593104 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
PRKCSH-220ENST00000593104 ATG3Q9NT62 314 aa15.55■□□□□ 0.08
PRKCSH-220ENST00000593104 SLC4A9Q96Q91 983 aa15.54■□□□□ 0.08
PRKCSH-220ENST00000593104 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
PRKCSH-220ENST00000593104 GPBP1L1Q9HC44 474 aaPredicted RBP15.53■□□□□ 0.08
PRKCSH-220ENST00000593104 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
PRKCSH-220ENST00000593104 MMP10P09238 476 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms