RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	HCST	Q9UBK5	93 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	NCOA1	Q15788	1441 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098		A0A0G2JS52	829 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	KDF1	Q8NAX2	398 aa	Predicted RBP	3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	NPAT	Q14207	1427 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	GRM5	P41594	1212 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PHLDB3	Q6NSJ2	640 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ANKRD13D	Q6ZTN6	518 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TRAIP	Q9BWF2	469 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RAPGEF6	Q8TEU7	1601 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	DIP2C	Q9Y2E4	1556 aa		3.58	□□□□□ -1.84
PIK3C3-215	ENST00000593098	FBXO45	P0C2W1	286 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CCNYL3	P0C7X3	344 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	MAP10	Q9P2G4	905 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	SOX11	P35716	441 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	NR1H3	Q13133	447 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RNF166	Q96A37	237 aa	Predicted RBP	3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ZBTB7B	O15156	539 aa	Predicted RBP	3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	SH3BP2	P78314	561 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	WASHC4	Q2M389	1173 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	LIAT1	Q6ZQX7	453 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	UNC93B1	Q9H1C4	597 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PCDHB3	Q9Y5E6	796 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RAPGEF2	Q9Y4G8	1499 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	UACA	Q9BZF9	1416 aa		3.57	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RNF223	E7ERA6	249 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	FAM174A	Q8TBP5	190 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ABCA6	Q8N139	1617 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	DIP2A	Q14689	1571 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	EPHA4	P54764	986 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PRR20E	P86478	221 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PRR20C	P86479	221 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PRR20D	P86480	221 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PRR20B	P86481	221 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PRR20A	P86496	221 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	GDPD2	Q9HCC8	539 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	SUPT6H	Q7KZ85	1726 aa	Known RBP	3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	LRRIQ1	Q96JM4	1722 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	LZTS3	O60299	673 aa	Predicted RBP	3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	GDF9	O60383	454 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	SIX5	Q8N196	739 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	KCNH8	Q96L42	1107 aa		3.56	□□□□□ -1.84
PIK3C3-215	ENST00000593098	LCE2B	O14633	110 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ATG7	O95352	703 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	WNT7B	P56706	349 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CCDC125	Q86Z20	511 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	GLMN	Q92990	594 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ZMIZ1	Q9ULJ6	1067 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	HECW1	Q76N89	1606 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	INO80	Q9ULG1	1556 aa	Predicted RBP	3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	YEATS2	Q9ULM3	1422 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ZNF511	Q8NB15	262 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CEP126	Q9P2H0	1117 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	MYO5C	Q9NQX4	1742 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ZFYVE16	Q7Z3T8	1539 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098		M0R2N6	131 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TOR4A	Q9NXH8	423 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TNIK	Q9UKE5	1360 aa		3.55	□□□□□ -1.84
PIK3C3-215	ENST00000593098	KIDINS220	Q9ULH0	1771 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	MARF1	Q9Y4F3	1742 aa	Known RBP	3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RGPD3	A6NKT7	1758 aa	Predicted RBP	3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	RGPD4	Q7Z3J3	1758 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	FOXK2	Q01167	660 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	C1orf216	Q8TAB5	229 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	MAFB	Q9Y5Q3	323 aa	Predicted RBP	3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	FANCA	O15360	1455 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PPP1R18	Q6NYC8	613 aa		3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CCDC85A	Q96PX6	553 aa	Predicted RBP	3.54	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ZBBX	A8MT70	800 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	S1PR4	O95977	384 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CCDC82	Q8N4S0	544 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PCDHGA11	Q9Y5H2	935 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ADGB	Q8N7X0	1667 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	DNMT1	P26358	1616 aa	Known RBP	3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ATP9B	O43861	1147 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	LILRA1	O75019	489 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	ERVK-9	P63128	1117 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TSGA10IP	Q3SY00	556 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098		Q6ZVU0	165 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	C14orf37	Q86TY3	774 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	KCTD12	Q96CX2	325 aa	Known RBP	3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	PPP1R12C	Q9BZL4	782 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CDC42BPB	Q9Y5S2	1711 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	AP1G2	O75843	785 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	AVP	P01185	164 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	CRIPAK	Q8N1N5	446 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	SLC6A16	Q9GZN6	736 aa		3.53	□□□□□ -1.84
PIK3C3-215	ENST00000593098	TDRD9	Q8NDG6	1382 aa	Known RBP	3.53	□□□□□ -1.85
PIK3C3-215	ENST00000593098	NPR3	P17342	541 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	NOM1	Q5C9Z4	860 aa	Known RBP	3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	SLC4A9	Q96Q91	983 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	SERPINA10	Q9UK55	444 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	PREX2	Q70Z35	1606 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	WRN	Q14191	1432 aa	Predicted RBP eCLIP	3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	PTK7	Q13308	1070 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	NUDT12	Q9BQG2	462 aa		3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	CDK13	Q14004	1512 aa	Known RBP	3.52	□□□□□ -1.85
PIK3C3-215	ENST00000593098	WNT7A	O00755	349 aa		3.52	□□□□□ -1.85

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