RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 DCAF8L1A6NGE4 600 aa28.51■■■□□ 2.15
TRIM47-207ENST00000593089 TIMELESSQ9UNS1 1208 aa28.51■■■□□ 2.15
TRIM47-207ENST00000593089 PRIM1P49642 420 aaKnown RBP28.5■■■□□ 2.15
TRIM47-207ENST00000593089 ZNF827Q17R98 1081 aa28.5■■■□□ 2.15
TRIM47-207ENST00000593089 MTFR1LQ9H019 292 aa28.5■■■□□ 2.15
TRIM47-207ENST00000593089 CARD14Q9BXL6 1004 aa28.49■■■□□ 2.15
TRIM47-207ENST00000593089 HSP90AB2PQ58FF8 381 aa28.48■■■□□ 2.15
TRIM47-207ENST00000593089 NSD3Q9BZ95 1437 aa28.48■■■□□ 2.15
TRIM47-207ENST00000593089 INSRP06213 1382 aa28.47■■■□□ 2.15
TRIM47-207ENST00000593089 YY1P25490 414 aa28.46■■■□□ 2.15
TRIM47-207ENST00000593089 SLC27A3Q5K4L6 730 aa28.46■■■□□ 2.15
TRIM47-207ENST00000593089 RAPGEF4Q8WZA2 1011 aa28.46■■■□□ 2.15
TRIM47-207ENST00000593089 FLT4P35916 1363 aa28.46■■■□□ 2.15
TRIM47-207ENST00000593089 NSD2O96028 1365 aa28.44■■■□□ 2.14
TRIM47-207ENST00000593089 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 TATP17735 454 aaPredicted RBP28.43■■■□□ 2.14
TRIM47-207ENST00000593089 KCNQ4P56696 695 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 AKT1S1Q96B36 256 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 SGIP1Q9BQI5 828 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 LY75O60449 1722 aa28.43■■■□□ 2.14
TRIM47-207ENST00000593089 KIF24Q5T7B8 1368 aa28.42■■■□□ 2.14
TRIM47-207ENST00000593089 FHDC1Q9C0D6 1143 aaPredicted RBP28.42■■■□□ 2.14
TRIM47-207ENST00000593089 EMILIN1Q9Y6C2 1016 aa28.42■■■□□ 2.14
TRIM47-207ENST00000593089 QSER1Q2KHR3 1735 aa28.4■■■□□ 2.14
TRIM47-207ENST00000593089 SYT17Q9BSW7 474 aa28.39■■■□□ 2.14
TRIM47-207ENST00000593089 POLR3GLQ9BT43 218 aa28.39■■■□□ 2.14
TRIM47-207ENST00000593089 TUBGCP6Q96RT7 1819 aa28.39■■■□□ 2.13
TRIM47-207ENST00000593089 PPM1GO15355 546 aaPredicted RBP28.37■■■□□ 2.13
TRIM47-207ENST00000593089 ARXQ96QS3 562 aa28.37■■■□□ 2.13
TRIM47-207ENST00000593089 TFCP2L1Q9NZI6 479 aa28.36■■■□□ 2.13
TRIM47-207ENST00000593089 CCNL1Q9UK58 526 aaPredicted RBP28.36■■■□□ 2.13
TRIM47-207ENST00000593089 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
TRIM47-207ENST00000593089 PCDH11XQ9BZA7 1347 aa28.36■■■□□ 2.13
TRIM47-207ENST00000593089 PCDH11YQ9BZA8 1340 aa28.36■■■□□ 2.13
TRIM47-207ENST00000593089 ANKRD26Q9UPS8 1709 aa28.35■■■□□ 2.13
TRIM47-207ENST00000593089 MAP2P11137 1827 aaKnown RBP28.34■■■□□ 2.13
TRIM47-207ENST00000593089 SLC16A10Q8TF71 515 aa28.32■■■□□ 2.12
TRIM47-207ENST00000593089 PKD1L3Q7Z443 1732 aa28.3■■■□□ 2.12
TRIM47-207ENST00000593089 CYP27B1O15528 508 aa28.29■■■□□ 2.12
TRIM47-207ENST00000593089 WASHC2AQ641Q2 1341 aa28.28■■■□□ 2.12
TRIM47-207ENST00000593089 POLD1P28340 1107 aa28.28■■■□□ 2.12
TRIM47-207ENST00000593089 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
TRIM47-207ENST00000593089 TOGARAM1Q9Y4F4 1720 aa28.28■■■□□ 2.12
TRIM47-207ENST00000593089 COL24A1Q17RW2 1714 aa28.27■■■□□ 2.12
TRIM47-207ENST00000593089 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
TRIM47-207ENST00000593089 KLHL34Q8N239 644 aa28.27■■■□□ 2.12
TRIM47-207ENST00000593089 ITGB4P16144 1822 aa28.27■■■□□ 2.12
TRIM47-207ENST00000593089 NCAPD2Q15021 1401 aa28.26■■■□□ 2.12
TRIM47-207ENST00000593089 MAP3K5Q99683 1374 aa28.26■■■□□ 2.12
TRIM47-207ENST00000593089 C5P01031 1676 aa28.26■■■□□ 2.12
TRIM47-207ENST00000593089 HSPA5P11021 654 aaKnown RBP28.26■■■□□ 2.11
TRIM47-207ENST00000593089 MSH5O43196 834 aa28.25■■■□□ 2.11
TRIM47-207ENST00000593089 TNNT2P45379 298 aaPredicted RBP28.25■■■□□ 2.11
TRIM47-207ENST00000593089 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
TRIM47-207ENST00000593089 PALLDQ8WX93 1383 aa28.24■■■□□ 2.11
TRIM47-207ENST00000593089 EYA1Q99502 592 aa28.24■■■□□ 2.11
TRIM47-207ENST00000593089 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
TRIM47-207ENST00000593089 SPG7Q9UQ90 795 aa28.23■■■□□ 2.11
TRIM47-207ENST00000593089 TAF1LQ8IZX4 1826 aa28.22■■■□□ 2.11
TRIM47-207ENST00000593089 COL23A1Q86Y22 540 aaPredicted RBP28.21■■■□□ 2.11
TRIM47-207ENST00000593089 PANK3Q9H999 370 aa28.19■■■□□ 2.1
TRIM47-207ENST00000593089 EIF4A2Q14240 407 aaKnown RBP28.17■■■□□ 2.1
TRIM47-207ENST00000593089 NKX1-1Q15270 411 aaPredicted RBP28.17■■■□□ 2.1
TRIM47-207ENST00000593089 PIGBQ92521 554 aa28.17■■■□□ 2.1
TRIM47-207ENST00000593089 SMARCC1Q92922 1105 aaPredicted RBP28.17■■■□□ 2.1
TRIM47-207ENST00000593089 CHD4Q14839 1912 aa28.17■■■□□ 2.1
TRIM47-207ENST00000593089 UTRNP46939 3433 aa28.17■■■□□ 2.1
TRIM47-207ENST00000593089 GPR162Q16538 588 aa28.16■■■□□ 2.1
TRIM47-207ENST00000593089 MSL1Q68DK7 614 aa28.15■■■□□ 2.1
TRIM47-207ENST00000593089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.15■■■□□ 2.1
TRIM47-207ENST00000593089 C4BP0C0L5 1744 aa28.14■■■□□ 2.1
TRIM47-207ENST00000593089 HMGB2P26583 209 aaKnown RBP28.13■■■□□ 2.09
TRIM47-207ENST00000593089 PELP1Q8IZL8 1130 aaKnown RBP28.13■■■□□ 2.09
TRIM47-207ENST00000593089 PHKG2P15735 406 aa28.12■■■□□ 2.09
TRIM47-207ENST00000593089 IFNL2Q8IZJ0 200 aa28.12■■■□□ 2.09
TRIM47-207ENST00000593089 NLGN2Q8NFZ4 835 aa28.12■■■□□ 2.09
TRIM47-207ENST00000593089 AK7Q96M32 723 aa28.11■■■□□ 2.09
TRIM47-207ENST00000593089 TMOD3Q9NYL9 352 aa28.11■■■□□ 2.09
TRIM47-207ENST00000593089 ZNF784Q8NCA9 323 aaPredicted RBP28.1■■■□□ 2.09
TRIM47-207ENST00000593089 FLAD1Q8NFF5 587 aa28.1■■■□□ 2.09
TRIM47-207ENST00000593089 UBR3Q6ZT12 1888 aa28.07■■■□□ 2.08
TRIM47-207ENST00000593089 IGSF1Q8N6C5 1336 aa28.07■■■□□ 2.08
TRIM47-207ENST00000593089 LOC102724428A0A0B4J2F2 783 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 PHF14O94880 888 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 SIK1P57059 783 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 MORC1Q86VD1 984 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 AMIGO3Q86WK7 504 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 ASAP1Q9ULH1 1129 aa28.06■■■□□ 2.08
TRIM47-207ENST00000593089 SMIM5Q71RC9 77 aa28.05■■■□□ 2.08
TRIM47-207ENST00000593089 LINC00116Q8NCU8 138 aa28.04■■■□□ 2.08
TRIM47-207ENST00000593089 PLEKHG2Q9H7P9 1386 aa28.02■■■□□ 2.08
TRIM47-207ENST00000593089 KNSTRNQ9Y448 316 aa28.02■■■□□ 2.08
TRIM47-207ENST00000593089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.01■■■□□ 2.07
TRIM47-207ENST00000593089 ATP6V1AP38606 617 aa28.01■■■□□ 2.07
TRIM47-207ENST00000593089 ATG3Q9NT62 314 aa28.01■■■□□ 2.07
TRIM47-207ENST00000593089 ITPK1Q13572 414 aa28■■■□□ 2.07
TRIM47-207ENST00000593089 PLEKHO1Q53GL0 409 aaPredicted RBP28■■■□□ 2.07
TRIM47-207ENST00000593089 YBX3P16989 372 aaKnown RBP eCLIP27.98■■■□□ 2.07
TRIM47-207ENST00000593089 SSFA2P28290 1259 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms