RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
PRKCSH-218ENST00000593053 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-218ENST00000593053 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-218ENST00000593053 TNNT2P45379 298 aaPredicted RBP18.03■□□□□ 0.48
PRKCSH-218ENST00000593053 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-218ENST00000593053 SPON1Q9HCB6 807 aa18.03■□□□□ 0.48
PRKCSH-218ENST00000593053 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.48
PRKCSH-218ENST00000593053 SLC15A2Q16348 729 aa18.02■□□□□ 0.48
PRKCSH-218ENST00000593053 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-218ENST00000593053 POLKQ9UBT6 870 aa18.02■□□□□ 0.48
PRKCSH-218ENST00000593053 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
PRKCSH-218ENST00000593053 LRRC4BQ9NT99 713 aa17.99■□□□□ 0.47
PRKCSH-218ENST00000593053 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-218ENST00000593053 BTAF1O14981 1849 aa17.98■□□□□ 0.47
PRKCSH-218ENST00000593053 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
PRKCSH-218ENST00000593053 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
PRKCSH-218ENST00000593053 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
PRKCSH-218ENST00000593053 NSD2O96028 1365 aa17.97■□□□□ 0.47
PRKCSH-218ENST00000593053 EYA1Q99502 592 aa17.97■□□□□ 0.47
PRKCSH-218ENST00000593053 SHANK3Q9BYB0 1731 aa17.96■□□□□ 0.47
PRKCSH-218ENST00000593053 CYP27B1O15528 508 aa17.96■□□□□ 0.47
PRKCSH-218ENST00000593053 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
PRKCSH-218ENST00000593053 NCAPD2Q15021 1401 aa17.96■□□□□ 0.47
PRKCSH-218ENST00000593053 KCNQ4P56696 695 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 ZNF827Q17R98 1081 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
PRKCSH-218ENST00000593053 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
PRKCSH-218ENST00000593053 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
PRKCSH-218ENST00000593053 SPG7Q9UQ90 795 aa17.93■□□□□ 0.46
PRKCSH-218ENST00000593053 PAPPAQ13219 1627 aa17.93■□□□□ 0.46
PRKCSH-218ENST00000593053 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
PRKCSH-218ENST00000593053 KAT6BQ8WYB5 2073 aa17.91■□□□□ 0.46
PRKCSH-218ENST00000593053 PTGER2P43116 358 aa17.91■□□□□ 0.46
PRKCSH-218ENST00000593053 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
PRKCSH-218ENST00000593053 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
PRKCSH-218ENST00000593053 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-218ENST00000593053 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-218ENST00000593053 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
PRKCSH-218ENST00000593053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRKCSH-218ENST00000593053 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
PRKCSH-218ENST00000593053 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
PRKCSH-218ENST00000593053 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
PRKCSH-218ENST00000593053 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
PRKCSH-218ENST00000593053 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
PRKCSH-218ENST00000593053 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
PRKCSH-218ENST00000593053 PALLDQ8WX93 1383 aa17.86■□□□□ 0.45
PRKCSH-218ENST00000593053 PHKG2P15735 406 aa17.85■□□□□ 0.45
PRKCSH-218ENST00000593053 IFNL2Q8IZJ0 200 aa17.85■□□□□ 0.45
PRKCSH-218ENST00000593053 PIGBQ92521 554 aa17.85■□□□□ 0.45
PRKCSH-218ENST00000593053 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-218ENST00000593053 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.44
PRKCSH-218ENST00000593053 LY75O60449 1722 aa17.83■□□□□ 0.44
PRKCSH-218ENST00000593053 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 CC2D1BQ5T0F9 858 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 SLC16A10Q8TF71 515 aa17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 ARXQ96QS3 562 aa17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 FHDC1Q9C0D6 1143 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
PRKCSH-218ENST00000593053 PLEKHG2Q9H7P9 1386 aa17.81■□□□□ 0.44
PRKCSH-218ENST00000593053 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
PRKCSH-218ENST00000593053 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-218ENST00000593053 MSH5O43196 834 aa17.8■□□□□ 0.44
PRKCSH-218ENST00000593053 IL13P35225 146 aa17.8■□□□□ 0.44
PRKCSH-218ENST00000593053 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
PRKCSH-218ENST00000593053 SYT17Q9BSW7 474 aa17.8■□□□□ 0.44
PRKCSH-218ENST00000593053 MTHFSP49914 203 aa17.79■□□□□ 0.44
PRKCSH-218ENST00000593053 CNGB1Q14028 1251 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-218ENST00000593053 ZNF530Q6P9A1 599 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-218ENST00000593053 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
PRKCSH-218ENST00000593053 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-218ENST00000593053 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-218ENST00000593053 POLD1P28340 1107 aa17.78■□□□□ 0.44
PRKCSH-218ENST00000593053 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
PRKCSH-218ENST00000593053 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
PRKCSH-218ENST00000593053 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.44
PRKCSH-218ENST00000593053 SIK1P57059 783 aa17.77■□□□□ 0.44
PRKCSH-218ENST00000593053 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
PRKCSH-218ENST00000593053 AK7Q96M32 723 aa17.76■□□□□ 0.43
PRKCSH-218ENST00000593053 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
PRKCSH-218ENST00000593053 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 C1orf141Q5JVX7 400 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 KDRP35968 1356 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 ITGB4P16144 1822 aa17.75■□□□□ 0.43
PRKCSH-218ENST00000593053 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
PRKCSH-218ENST00000593053 FLAD1Q8NFF5 587 aa17.74■□□□□ 0.43
PRKCSH-218ENST00000593053 NPC1L1Q9UHC9 1359 aa17.74■□□□□ 0.43
PRKCSH-218ENST00000593053 TUBGCP6Q96RT7 1819 aa17.74■□□□□ 0.43
PRKCSH-218ENST00000593053 C5P01031 1676 aa17.74■□□□□ 0.43
PRKCSH-218ENST00000593053 KDM6AO15550 1401 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-218ENST00000593053 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
PRKCSH-218ENST00000593053 CABP4P57796 275 aa17.73■□□□□ 0.43
PRKCSH-218ENST00000593053 ITPK1Q13572 414 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms