RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ANP32CO43423 234 aa20.02■□□□□ 0.8
DDX39A-221ENST00000593026 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
DDX39A-221ENST00000593026 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
DDX39A-221ENST00000593026 KDRP35968 1356 aa20.02■□□□□ 0.8
DDX39A-221ENST00000593026 CCDC125Q86Z20 511 aa20.01■□□□□ 0.79
DDX39A-221ENST00000593026 MARCH10Q8NA82 808 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-221ENST00000593026 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
DDX39A-221ENST00000593026 PLEKHG2Q9H7P9 1386 aa20■□□□□ 0.79
DDX39A-221ENST00000593026 SHANK3Q9BYB0 1731 aa20■□□□□ 0.79
DDX39A-221ENST00000593026 HMOX1P09601 288 aa20■□□□□ 0.79
DDX39A-221ENST00000593026 FAM196AQ6ZSG2 479 aa20■□□□□ 0.79
DDX39A-221ENST00000593026 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
DDX39A-221ENST00000593026 SPG7Q9UQ90 795 aa19.99■□□□□ 0.79
DDX39A-221ENST00000593026 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
DDX39A-221ENST00000593026 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
DDX39A-221ENST00000593026 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-221ENST00000593026 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■□□□ 11.6
DDX39A-221ENST00000593026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.79
DDX39A-221ENST00000593026 EP400Q96L91 3159 aa19.96■□□□□ 0.79
DDX39A-221ENST00000593026 BCL9O00512 1426 aa19.95■□□□□ 0.78
DDX39A-221ENST00000593026 PLEKHO1Q53GL0 409 aaPredicted RBP19.95■□□□□ 0.78
DDX39A-221ENST00000593026 AMOTQ4VCS5 1084 aa19.94■□□□□ 0.78
DDX39A-221ENST00000593026 CYP27B1O15528 508 aa19.93■□□□□ 0.78
DDX39A-221ENST00000593026 TRIM37O94972 964 aa19.92■□□□□ 0.78
DDX39A-221ENST00000593026 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
DDX39A-221ENST00000593026 FCHSD2O94868 740 aa19.91■□□□□ 0.78
DDX39A-221ENST00000593026 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
DDX39A-221ENST00000593026 ZNF530Q6P9A1 599 aaPredicted RBP19.91■□□□□ 0.78
DDX39A-221ENST00000593026 RSPH6AQ9H0K4 717 aa19.91■□□□□ 0.78
DDX39A-221ENST00000593026 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
DDX39A-221ENST00000593026 IFNL2Q8IZJ0 200 aa19.9■□□□□ 0.78
DDX39A-221ENST00000593026 PHKG2P15735 406 aa19.89■□□□□ 0.77
DDX39A-221ENST00000593026 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
DDX39A-221ENST00000593026 DOT1LQ8TEK3 1739 aa19.89■□□□□ 0.77
DDX39A-221ENST00000593026 ACSBG1Q96GR2 724 aa19.89■□□□□ 0.77
DDX39A-221ENST00000593026 TNS1Q9HBL0 1735 aaKnown RBP19.89■□□□□ 0.77
DDX39A-221ENST00000593026 NHSQ6T4R5 1651 aa19.88■□□□□ 0.77
DDX39A-221ENST00000593026 C1orf141Q5JVX7 400 aa19.88■□□□□ 0.77
DDX39A-221ENST00000593026 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-221ENST00000593026 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
DDX39A-221ENST00000593026 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-221ENST00000593026 KCNQ2O43526 872 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 NEFMP07197 916 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 HSP90AB1P08238 724 aaKnown RBP19.85■□□□□ 0.77
DDX39A-221ENST00000593026 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
DDX39A-221ENST00000593026 GAS2L2Q8NHY3 880 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
DDX39A-221ENST00000593026 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
DDX39A-221ENST00000593026 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
DDX39A-221ENST00000593026 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
DDX39A-221ENST00000593026 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-221ENST00000593026 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
DDX39A-221ENST00000593026 KAT6BQ8WYB5 2073 aa19.83■□□□□ 0.77
DDX39A-221ENST00000593026 APBA3O96018 575 aa19.83■□□□□ 0.77
DDX39A-221ENST00000593026 BAG6P46379 1132 aa19.83■□□□□ 0.77
DDX39A-221ENST00000593026 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
DDX39A-221ENST00000593026 DCAF5Q96JK2 942 aa19.83■□□□□ 0.77
DDX39A-221ENST00000593026 BTAF1O14981 1849 aa19.81■□□□□ 0.76
DDX39A-221ENST00000593026 MAPK8IP3Q9UPT6 1336 aa19.81■□□□□ 0.76
DDX39A-221ENST00000593026 DEFB132Q7Z7B7 95 aa19.81■□□□□ 0.76
DDX39A-221ENST00000593026 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
DDX39A-221ENST00000593026 KDM6AO15550 1401 aaPredicted RBP19.81■□□□□ 0.76
DDX39A-221ENST00000593026 MAP3K5Q99683 1374 aa19.81■□□□□ 0.76
DDX39A-221ENST00000593026 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
DDX39A-221ENST00000593026 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
DDX39A-221ENST00000593026 ITGB4P16144 1822 aa19.79■□□□□ 0.76
DDX39A-221ENST00000593026 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
DDX39A-221ENST00000593026 GNAT3A8MTJ3 354 aa19.78■□□□□ 0.76
DDX39A-221ENST00000593026 EN1Q05925 392 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-221ENST00000593026 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.76
DDX39A-221ENST00000593026 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
DDX39A-221ENST00000593026 TMOD3Q9NYL9 352 aa19.77■□□□□ 0.76
DDX39A-221ENST00000593026 RGPD3A6NKT7 1758 aaPredicted RBP19.77■□□□□ 0.76
DDX39A-221ENST00000593026 RGPD4Q7Z3J3 1758 aa19.77■□□□□ 0.76
DDX39A-221ENST00000593026 ADAMTS7Q9UKP4 1686 aa19.76■□□□□ 0.75
DDX39A-221ENST00000593026 PLSCR1O15162 318 aa19.76■□□□□ 0.75
DDX39A-221ENST00000593026 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
DDX39A-221ENST00000593026 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
DDX39A-221ENST00000593026 VIRMAQ69YN4 1812 aaKnown RBP19.76■□□□□ 0.75
DDX39A-221ENST00000593026 RNMTO43148 476 aaKnown RBP19.75■□□□□ 0.75
DDX39A-221ENST00000593026 CABP4P57796 275 aa19.75■□□□□ 0.75
DDX39A-221ENST00000593026 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
DDX39A-221ENST00000593026 PIGBQ92521 554 aa19.75■□□□□ 0.75
DDX39A-221ENST00000593026 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
DDX39A-221ENST00000593026 EZH2Q15910 746 aaKnown RBP19.74■□□□□ 0.75
DDX39A-221ENST00000593026 RTF1Q92541 710 aaKnown RBP19.74■□□□□ 0.75
DDX39A-221ENST00000593026 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
DDX39A-221ENST00000593026 MRC1P22897 1456 aa19.73■□□□□ 0.75
DDX39A-221ENST00000593026 DLG5Q8TDM6 1919 aa19.72■□□□□ 0.75
DDX39A-221ENST00000593026 IL17REQ8NFR9 667 aa19.72■□□□□ 0.75
DDX39A-221ENST00000593026 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
DDX39A-221ENST00000593026 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
DDX39A-221ENST00000593026 HTATSF1O43719 755 aaKnown RBP19.71■□□□□ 0.75
DDX39A-221ENST00000593026 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
DDX39A-221ENST00000593026 RREB1Q92766 1687 aa19.71■□□□□ 0.75
DDX39A-221ENST00000593026 CEMIPQ8WUJ3 1361 aa19.7■□□□□ 0.74
DDX39A-221ENST00000593026 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
DDX39A-221ENST00000593026 TEFQ10587 303 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms