RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-219ENST00000592927 LRRC37A3O60309 1634 aa16.16■□□□□ 0.18
DDX39A-219ENST00000592927 SOX12O15370 315 aa16.15■□□□□ 0.18
DDX39A-219ENST00000592927 COL13A1Q5TAT6 717 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-219ENST00000592927 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
DDX39A-219ENST00000592927 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
DDX39A-219ENST00000592927 DNAJC5GQ8N7S2 189 aa16.14■□□□□ 0.17
DDX39A-219ENST00000592927 NSD2O96028 1365 aa16.13■□□□□ 0.17
DDX39A-219ENST00000592927 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-219ENST00000592927 CDCA7Q9BWT1 371 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-219ENST00000592927 EXOC5O00471 708 aa16.12■□□□□ 0.17
DDX39A-219ENST00000592927 APLP1P51693 650 aa16.12■□□□□ 0.17
DDX39A-219ENST00000592927 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
DDX39A-219ENST00000592927 SLIT3O75094 1523 aa16.12■□□□□ 0.17
DDX39A-219ENST00000592927 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
DDX39A-219ENST00000592927 MORC1Q86VD1 984 aa16.11■□□□□ 0.17
DDX39A-219ENST00000592927 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
DDX39A-219ENST00000592927 PRELPP51888 382 aa16.1■□□□□ 0.17
DDX39A-219ENST00000592927 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-219ENST00000592927 LRRC4BQ9NT99 713 aa16.1■□□□□ 0.17
DDX39A-219ENST00000592927 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
DDX39A-219ENST00000592927 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
DDX39A-219ENST00000592927 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
DDX39A-219ENST00000592927 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
DDX39A-219ENST00000592927 KIF3CO14782 793 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-219ENST00000592927 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 WDR17Q8IZU2 1322 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 ADCY9O60503 1353 aa16.08■□□□□ 0.16
DDX39A-219ENST00000592927 FBLN1P23142 703 aa16.07■□□□□ 0.16
DDX39A-219ENST00000592927 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
DDX39A-219ENST00000592927 NFAT5O94916 1531 aa16.07■□□□□ 0.16
DDX39A-219ENST00000592927 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
DDX39A-219ENST00000592927 PRKRIP1Q9H875 184 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-219ENST00000592927 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
DDX39A-219ENST00000592927 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
DDX39A-219ENST00000592927 AMPHP49418 695 aa16.04■□□□□ 0.16
DDX39A-219ENST00000592927 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
DDX39A-219ENST00000592927 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
DDX39A-219ENST00000592927 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
DDX39A-219ENST00000592927 CSB-PGBD3P0DP91 1061 aa16.03■□□□□ 0.16
DDX39A-219ENST00000592927 RALBP1Q15311 655 aa16.03■□□□□ 0.16
DDX39A-219ENST00000592927 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-219ENST00000592927 SLC34A2O95436 690 aa16.01■□□□□ 0.15
DDX39A-219ENST00000592927 IP6K1Q92551 441 aa16.01■□□□□ 0.15
DDX39A-219ENST00000592927 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
DDX39A-219ENST00000592927 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
DDX39A-219ENST00000592927 RTL1A6NKG5 1358 aa16■□□□□ 0.15
DDX39A-219ENST00000592927 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
DDX39A-219ENST00000592927 MSH5O43196 834 aa15.99■□□□□ 0.15
DDX39A-219ENST00000592927 HOXC9P31274 260 aa15.99■□□□□ 0.15
DDX39A-219ENST00000592927 KCNQ4P56696 695 aa15.99■□□□□ 0.15
DDX39A-219ENST00000592927 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
DDX39A-219ENST00000592927 TOMM70O94826 608 aa15.98■□□□□ 0.15
DDX39A-219ENST00000592927 TNS2Q63HR2 1409 aa15.98■□□□□ 0.15
DDX39A-219ENST00000592927 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
DDX39A-219ENST00000592927 ABCC6O95255 1503 aa15.98■□□□□ 0.15
DDX39A-219ENST00000592927 FLT4P35916 1363 aa15.98■□□□□ 0.15
DDX39A-219ENST00000592927 HTRA3P83110 453 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 CD2APQ9Y5K6 639 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 LTN1O94822 1766 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
DDX39A-219ENST00000592927 MTHFSP49914 203 aa15.96■□□□□ 0.15
DDX39A-219ENST00000592927 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
DDX39A-219ENST00000592927 MSL1Q68DK7 614 aa15.96■□□□□ 0.15
DDX39A-219ENST00000592927 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
DDX39A-219ENST00000592927 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
DDX39A-219ENST00000592927 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
DDX39A-219ENST00000592927 COL18A1P39060 1754 aa15.95■□□□□ 0.14
DDX39A-219ENST00000592927 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
DDX39A-219ENST00000592927 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
DDX39A-219ENST00000592927 WNK3Q9BYP7 1800 aa15.95■□□□□ 0.14
DDX39A-219ENST00000592927 INSRP06213 1382 aa15.95■□□□□ 0.14
DDX39A-219ENST00000592927 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
DDX39A-219ENST00000592927 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-219ENST00000592927 ERBB3P21860 1342 aa15.94■□□□□ 0.14
DDX39A-219ENST00000592927 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
DDX39A-219ENST00000592927 NLRP2Q9NX02 1062 aa15.92■□□□□ 0.14
DDX39A-219ENST00000592927 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
DDX39A-219ENST00000592927 BTAF1O14981 1849 aa15.9■□□□□ 0.14
DDX39A-219ENST00000592927 IL2RBP14784 551 aa15.9■□□□□ 0.14
DDX39A-219ENST00000592927 QSER1Q2KHR3 1735 aa15.9■□□□□ 0.14
DDX39A-219ENST00000592927 EIF4A2Q14240 407 aaKnown RBP15.89■□□□□ 0.13
DDX39A-219ENST00000592927 RGPD5Q99666 1765 aa15.89■□□□□ 0.13
DDX39A-219ENST00000592927 IGSF1Q8N6C5 1336 aa15.89■□□□□ 0.13
DDX39A-219ENST00000592927 DIAPH1O60610 1272 aaKnown RBP15.88■□□□□ 0.13
DDX39A-219ENST00000592927 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
DDX39A-219ENST00000592927 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
DDX39A-219ENST00000592927 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
DDX39A-219ENST00000592927 IL13P35225 146 aa15.86■□□□□ 0.13
DDX39A-219ENST00000592927 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
DDX39A-219ENST00000592927 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
DDX39A-219ENST00000592927 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
DDX39A-219ENST00000592927 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
DDX39A-219ENST00000592927 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
DDX39A-219ENST00000592927 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms