RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 RXRBP28702 533 aa24.4■■□□□ 1.5
SAFB-213ENST00000592555 FAM9BQ8IZU0 186 aa24.4■■□□□ 1.5
SAFB-213ENST00000592555 SPG7Q9UQ90 795 aa24.4■■□□□ 1.5
SAFB-213ENST00000592555 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
SAFB-213ENST00000592555 OVOS2A0A0G2JMS6 1433 aa24.39■■□□□ 1.5
SAFB-213ENST00000592555 PLEKHF1Q96S99 279 aa24.39■■□□□ 1.49
SAFB-213ENST00000592555 GLI3P10071 1580 aa24.38■■□□□ 1.49
SAFB-213ENST00000592555 PARP4Q9UKK3 1724 aaKnown RBP24.38■■□□□ 1.49
SAFB-213ENST00000592555 EXOC5O00471 708 aa24.37■■□□□ 1.49
SAFB-213ENST00000592555 FAM98CQ17RN3 349 aaKnown RBP24.37■■□□□ 1.49
SAFB-213ENST00000592555 GAS2L2Q8NHY3 880 aa24.37■■□□□ 1.49
SAFB-213ENST00000592555 NGEFQ8N5V2 710 aa24.36■■□□□ 1.49
SAFB-213ENST00000592555 ZCRB1Q8TBF4 217 aaKnown RBP24.36■■□□□ 1.49
SAFB-213ENST00000592555 MEGF6O75095 1541 aa24.35■■□□□ 1.49
SAFB-213ENST00000592555 NCBP3Q53F19 620 aaKnown RBP24.35■■□□□ 1.49
SAFB-213ENST00000592555 DDB1Q16531 1140 aa24.34■■□□□ 1.49
SAFB-213ENST00000592555 WNK3Q9BYP7 1800 aa24.33■■□□□ 1.49
SAFB-213ENST00000592555 PCDH11XQ9BZA7 1347 aa24.32■■□□□ 1.48
SAFB-213ENST00000592555 PCDH11YQ9BZA8 1340 aa24.32■■□□□ 1.48
SAFB-213ENST00000592555 POTEAQ6S8J7 498 aa24.32■■□□□ 1.48
SAFB-213ENST00000592555 TNS2Q63HR2 1409 aa24.32■■□□□ 1.48
SAFB-213ENST00000592555 THSD7AQ9UPZ6 1657 aa24.32■■□□□ 1.48
SAFB-213ENST00000592555 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
SAFB-213ENST00000592555 PHACTR3Q96KR7 559 aa24.3■■□□□ 1.48
SAFB-213ENST00000592555 PKD1L3Q7Z443 1732 aa24.3■■□□□ 1.48
SAFB-213ENST00000592555 A0A0G2JS52 829 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 HTATSF1O43719 755 aaKnown RBP24.29■■□□□ 1.48
SAFB-213ENST00000592555 MYT1Q01538 1121 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 IFNL2Q8IZJ0 200 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 NFE2L2Q16236 605 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 MTHFSDQ2M296 383 aaKnown RBP24.29■■□□□ 1.48
SAFB-213ENST00000592555 AKAP4Q5JQC9 854 aa24.29■■□□□ 1.48
SAFB-213ENST00000592555 LMOD3Q0VAK6 560 aa24.28■■□□□ 1.48
SAFB-213ENST00000592555 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
SAFB-213ENST00000592555 ZNF530Q6P9A1 599 aaPredicted RBP24.27■■□□□ 1.48
SAFB-213ENST00000592555 TMPOP42166 694 aaKnown RBP24.26■■□□□ 1.47
SAFB-213ENST00000592555 LRRC37A3O60309 1634 aa24.25■■□□□ 1.47
SAFB-213ENST00000592555 GNAT3A8MTJ3 354 aa24.24■■□□□ 1.47
SAFB-213ENST00000592555 APAF1O14727 1248 aa24.24■■□□□ 1.47
SAFB-213ENST00000592555 PHKG2P15735 406 aa24.24■■□□□ 1.47
SAFB-213ENST00000592555 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
SAFB-213ENST00000592555 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
SAFB-213ENST00000592555 RTF1Q92541 710 aaKnown RBP24.23■■□□□ 1.47
SAFB-213ENST00000592555 CYP27B1O15528 508 aa24.22■■□□□ 1.47
SAFB-213ENST00000592555 RIPK4P57078 832 aa24.22■■□□□ 1.47
SAFB-213ENST00000592555 CCDC27Q2M243 656 aa24.22■■□□□ 1.47
SAFB-213ENST00000592555 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
SAFB-213ENST00000592555 DCAF5Q96JK2 942 aa24.22■■□□□ 1.47
SAFB-213ENST00000592555 KRT27Q7Z3Y8 459 aa24.21■■□□□ 1.47
SAFB-213ENST00000592555 BCL9O00512 1426 aa24.21■■□□□ 1.47
SAFB-213ENST00000592555 RGS12O14924 1447 aa24.19■■□□□ 1.46
SAFB-213ENST00000592555 CALD1Q05682 793 aaKnown RBP24.17■■□□□ 1.46
SAFB-213ENST00000592555 MARCH10Q8NA82 808 aaPredicted RBP24.17■■□□□ 1.46
SAFB-213ENST00000592555 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
SAFB-213ENST00000592555 ERVV-2B6SEH9 535 aa24.16■■□□□ 1.46
SAFB-213ENST00000592555 FAM196AQ6ZSG2 479 aa24.16■■□□□ 1.46
SAFB-213ENST00000592555 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
SAFB-213ENST00000592555 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
SAFB-213ENST00000592555 RNMTO43148 476 aaKnown RBP24.13■■□□□ 1.45
SAFB-213ENST00000592555 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
SAFB-213ENST00000592555 CEMIPQ8WUJ3 1361 aa24.13■■□□□ 1.45
SAFB-213ENST00000592555 MPRIPQ6WCQ1 1025 aa24.12■■□□□ 1.45
SAFB-213ENST00000592555 ADAMTS7Q9UKP4 1686 aa24.11■■□□□ 1.45
SAFB-213ENST00000592555 HNRNPUQ00839 825 aaKnown RBP eCLIP24.11■■□□□ 1.45
SAFB-213ENST00000592555 WDR63Q8IWG1 891 aa24.11■■□□□ 1.45
SAFB-213ENST00000592555 WWC1Q8IX03 1113 aa24.11■■□□□ 1.45
SAFB-213ENST00000592555 IL17REQ8NFR9 667 aa24.11■■□□□ 1.45
SAFB-213ENST00000592555 TEFQ10587 303 aa24.1■■□□□ 1.45
SAFB-213ENST00000592555 BABAM1Q9NWV8 329 aa24.1■■□□□ 1.45
SAFB-213ENST00000592555 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
SAFB-213ENST00000592555 IL16Q14005 1332 aa24.08■■□□□ 1.45
SAFB-213ENST00000592555 DLG5Q8TDM6 1919 aa24.08■■□□□ 1.45
SAFB-213ENST00000592555 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
SAFB-213ENST00000592555 CABP4P57796 275 aa24.07■■□□□ 1.44
SAFB-213ENST00000592555 MCM10Q7L590 875 aa24.07■■□□□ 1.44
SAFB-213ENST00000592555 SLC52A2Q9HAB3 445 aa24.07■■□□□ 1.44
SAFB-213ENST00000592555 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
SAFB-213ENST00000592555 MRC1P22897 1456 aa24.06■■□□□ 1.44
SAFB-213ENST00000592555 SCN11AQ9UI33 1791 aa24.06■■□□□ 1.44
SAFB-213ENST00000592555 ZBED9Q6R2W3 1325 aa24.06■■□□□ 1.44
SAFB-213ENST00000592555 TAF7Q15545 349 aaPredicted RBP24.05■■□□□ 1.44
SAFB-213ENST00000592555 TMOD3Q9NYL9 352 aa24.05■■□□□ 1.44
SAFB-213ENST00000592555 ZNF521Q96K83 1311 aa24.05■■□□□ 1.44
SAFB-213ENST00000592555 DCTN1Q14203 1278 aa24.03■■□□□ 1.44
SAFB-213ENST00000592555 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
SAFB-213ENST00000592555 GNAI1P63096 354 aa24.03■■□□□ 1.44
SAFB-213ENST00000592555 BCL11BQ9C0K0 894 aaPredicted RBP24.03■■□□□ 1.44
SAFB-213ENST00000592555 IFT57Q9NWB7 429 aa24.03■■□□□ 1.44
SAFB-213ENST00000592555 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
SAFB-213ENST00000592555 NFATC2IPQ8NCF5 419 aa24.02■■□□□ 1.44
SAFB-213ENST00000592555 CFAP44Q96MT7 982 aa24.02■■□□□ 1.44
SAFB-213ENST00000592555 GOLGA2Q08379 1002 aa24.01■■□□□ 1.43
SAFB-213ENST00000592555 SYTL4Q96C24 671 aaPredicted RBP24■■□□□ 1.43
SAFB-213ENST00000592555 BTBD11A6QL63 1104 aa23.99■■□□□ 1.43
SAFB-213ENST00000592555 FAM182BQ5T319 152 aa23.99■■□□□ 1.43
SAFB-213ENST00000592555 THUMPD2Q9BTF0 503 aaKnown RBP23.99■■□□□ 1.43
SAFB-213ENST00000592555 MYH16Q9H6N6 1097 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms