RNA–Protein interactions for RNA: ENST00000592484.5

LRP3-204, Transcript of LDL receptor related protein 3, humanhuman

TSL 4

Gene LRP3, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-204ENST00000592484 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
LRP3-204ENST00000592484 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
LRP3-204ENST00000592484 NBPF6Q5VWK0 638 aa22.07■■□□□ 1.12
LRP3-204ENST00000592484 NBPF4Q96M43 638 aa22.07■■□□□ 1.12
LRP3-204ENST00000592484 NSD3Q9BZ95 1437 aa22.06■■□□□ 1.12
LRP3-204ENST00000592484 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
LRP3-204ENST00000592484 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
LRP3-204ENST00000592484 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
LRP3-204ENST00000592484 ATF5Q9Y2D1 282 aaPredicted RBP22.05■■□□□ 1.12
LRP3-204ENST00000592484 QSER1Q2KHR3 1735 aa22.05■■□□□ 1.12
LRP3-204ENST00000592484 PRIM1P49642 420 aaKnown RBP22.04■■□□□ 1.12
LRP3-204ENST00000592484 SYTL4Q96C24 671 aaPredicted RBP22.04■■□□□ 1.12
LRP3-204ENST00000592484 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
LRP3-204ENST00000592484 LY75O60449 1722 aa22.03■■□□□ 1.12
LRP3-204ENST00000592484 NSD2O96028 1365 aa22.03■■□□□ 1.12
LRP3-204ENST00000592484 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
LRP3-204ENST00000592484 TATP17735 454 aaPredicted RBP22.02■■□□□ 1.12
LRP3-204ENST00000592484 ZNF827Q17R98 1081 aa22.02■■□□□ 1.12
LRP3-204ENST00000592484 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
LRP3-204ENST00000592484 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
LRP3-204ENST00000592484 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
LRP3-204ENST00000592484 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
LRP3-204ENST00000592484 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
LRP3-204ENST00000592484 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
LRP3-204ENST00000592484 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
LRP3-204ENST00000592484 YY1P25490 414 aa21.98■■□□□ 1.11
LRP3-204ENST00000592484 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
LRP3-204ENST00000592484 FHDC1Q9C0D6 1143 aaPredicted RBP21.97■■□□□ 1.11
LRP3-204ENST00000592484 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
LRP3-204ENST00000592484 SYT17Q9BSW7 474 aa21.96■■□□□ 1.11
LRP3-204ENST00000592484 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
LRP3-204ENST00000592484 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
LRP3-204ENST00000592484 ARXQ96QS3 562 aa21.95■■□□□ 1.1
LRP3-204ENST00000592484 MAP3K5Q99683 1374 aa21.95■■□□□ 1.1
LRP3-204ENST00000592484 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
LRP3-204ENST00000592484 TUBGCP6Q96RT7 1819 aa21.94■■□□□ 1.1
LRP3-204ENST00000592484 HMGB2P26583 209 aaKnown RBP21.94■■□□□ 1.1
LRP3-204ENST00000592484 TFCP2L1Q9NZI6 479 aa21.94■■□□□ 1.1
LRP3-204ENST00000592484 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
LRP3-204ENST00000592484 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
LRP3-204ENST00000592484 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
LRP3-204ENST00000592484 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
LRP3-204ENST00000592484 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
LRP3-204ENST00000592484 KCNQ4P56696 695 aa21.91■■□□□ 1.1
LRP3-204ENST00000592484 CYP27B1O15528 508 aa21.9■■□□□ 1.1
LRP3-204ENST00000592484 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
LRP3-204ENST00000592484 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.1
LRP3-204ENST00000592484 POLD1P28340 1107 aa21.89■■□□□ 1.09
LRP3-204ENST00000592484 POLKQ9UBT6 870 aa21.89■■□□□ 1.09
LRP3-204ENST00000592484 C5P01031 1676 aa21.88■■□□□ 1.09
LRP3-204ENST00000592484 ITGB4P16144 1822 aa21.88■■□□□ 1.09
LRP3-204ENST00000592484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.88■■□□□ 1.09
LRP3-204ENST00000592484 SPG7Q9UQ90 795 aa21.88■■□□□ 1.09
LRP3-204ENST00000592484 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
LRP3-204ENST00000592484 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
LRP3-204ENST00000592484 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
LRP3-204ENST00000592484 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
LRP3-204ENST00000592484 MPRIPQ6WCQ1 1025 aa21.86■■□□□ 1.09
LRP3-204ENST00000592484 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
LRP3-204ENST00000592484 EYA1Q99502 592 aa21.86■■□□□ 1.09
LRP3-204ENST00000592484 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
LRP3-204ENST00000592484 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
LRP3-204ENST00000592484 PANK3Q9H999 370 aa21.83■■□□□ 1.09
LRP3-204ENST00000592484 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
LRP3-204ENST00000592484 CHD4Q14839 1912 aa21.81■■□□□ 1.08
LRP3-204ENST00000592484 TNNT2P45379 298 aaPredicted RBP21.81■■□□□ 1.08
LRP3-204ENST00000592484 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
LRP3-204ENST00000592484 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
LRP3-204ENST00000592484 MSH5O43196 834 aa21.8■■□□□ 1.08
LRP3-204ENST00000592484 IFNL2Q8IZJ0 200 aa21.8■■□□□ 1.08
LRP3-204ENST00000592484 PIGBQ92521 554 aa21.8■■□□□ 1.08
LRP3-204ENST00000592484 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
LRP3-204ENST00000592484 UTRNP46939 3433 aa21.79■■□□□ 1.08
LRP3-204ENST00000592484 IGSF1Q8N6C5 1336 aa21.79■■□□□ 1.08
LRP3-204ENST00000592484 PHKG2P15735 406 aa21.78■■□□□ 1.08
LRP3-204ENST00000592484 KLHL34Q8N239 644 aa21.77■■□□□ 1.08
LRP3-204ENST00000592484 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
LRP3-204ENST00000592484 GPR162Q16538 588 aa21.75■■□□□ 1.07
LRP3-204ENST00000592484 AK7Q96M32 723 aa21.75■■□□□ 1.07
LRP3-204ENST00000592484 LOC102724428A0A0B4J2F2 783 aa21.74■■□□□ 1.07
LRP3-204ENST00000592484 SIK1P57059 783 aa21.74■■□□□ 1.07
LRP3-204ENST00000592484 UBR3Q6ZT12 1888 aa21.74■■□□□ 1.07
LRP3-204ENST00000592484 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
LRP3-204ENST00000592484 KNSTRNQ9Y448 316 aa21.73■■□□□ 1.07
LRP3-204ENST00000592484 HSP90AB1P08238 724 aaKnown RBP21.71■■□□□ 1.07
LRP3-204ENST00000592484 MSL1Q68DK7 614 aa21.71■■□□□ 1.07
LRP3-204ENST00000592484 ZNF784Q8NCA9 323 aaPredicted RBP21.71■■□□□ 1.07
LRP3-204ENST00000592484 NLGN2Q8NFZ4 835 aa21.71■■□□□ 1.07
LRP3-204ENST00000592484 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
LRP3-204ENST00000592484 SSFA2P28290 1259 aa21.7■■□□□ 1.06
LRP3-204ENST00000592484 AMOTQ4VCS5 1084 aa21.7■■□□□ 1.06
LRP3-204ENST00000592484 PLEKHO1Q53GL0 409 aaPredicted RBP21.7■■□□□ 1.06
LRP3-204ENST00000592484 ERVV-2B6SEH9 535 aa21.69■■□□□ 1.06
LRP3-204ENST00000592484 DCAF5Q96JK2 942 aa21.69■■□□□ 1.06
LRP3-204ENST00000592484 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
LRP3-204ENST00000592484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.68■■□□□ 1.06
LRP3-204ENST00000592484 LINC00116Q8NCU8 138 aa21.68■■□□□ 1.06
LRP3-204ENST00000592484 ATG3Q9NT62 314 aa21.68■■□□□ 1.06
LRP3-204ENST00000592484 CD2APQ9Y5K6 639 aa21.68■■□□□ 1.06
LRP3-204ENST00000592484 ATP6V1AP38606 617 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms