RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 DDX54Q8TDD1 881 aaKnown RBP27.81■■■□□ 2.04
DNMT1-227ENST00000592342 HMOX1P09601 288 aa27.8■■■□□ 2.04
DNMT1-227ENST00000592342 FAM196AQ6ZSG2 479 aa27.8■■■□□ 2.04
DNMT1-227ENST00000592342 MARCH10Q8NA82 808 aaPredicted RBP27.79■■■□□ 2.04
DNMT1-227ENST00000592342 SPG7Q9UQ90 795 aa27.79■■■□□ 2.04
DNMT1-227ENST00000592342 RGPD1P0DJD0 1748 aa27.78■■■□□ 2.04
DNMT1-227ENST00000592342 SOCS7O14512 581 aa27.77■■■□□ 2.04
DNMT1-227ENST00000592342 U2AF1L5P0DN76 240 aaPredicted RBP27.77■■■□□ 2.04
DNMT1-227ENST00000592342 U2AF1Q01081 240 aaKnown RBP eCLIP27.77■■■□□ 2.04
DNMT1-227ENST00000592342 KDRP35968 1356 aa27.76■■■□□ 2.03
DNMT1-227ENST00000592342 PCDH11XQ9BZA7 1347 aa27.75■■■□□ 2.03
DNMT1-227ENST00000592342 PCDH11YQ9BZA8 1340 aa27.75■■■□□ 2.03
DNMT1-227ENST00000592342 PLEKHO1Q53GL0 409 aaPredicted RBP27.74■■■□□ 2.03
DNMT1-227ENST00000592342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.74■■■□□ 2.038e-7■□□□□ 10.6
DNMT1-227ENST00000592342 PLEKHG2Q9H7P9 1386 aa27.73■■■□□ 2.03
DNMT1-227ENST00000592342 AMOTQ4VCS5 1084 aa27.72■■■□□ 2.03
DNMT1-227ENST00000592342 UPF1Q92900 1129 aaKnown RBP eCLIP27.72■■■□□ 2.039e-6■■■■□ 19.8
DNMT1-227ENST00000592342 SF3B2Q13435 895 aaKnown RBP27.71■■■□□ 2.03
DNMT1-227ENST00000592342 TRIM37O94972 964 aa27.68■■■□□ 2.02
DNMT1-227ENST00000592342 CCDC125Q86Z20 511 aa27.68■■■□□ 2.02
DNMT1-227ENST00000592342 PKD1L3Q7Z443 1732 aa27.67■■■□□ 2.02
DNMT1-227ENST00000592342 CYP27B1O15528 508 aa27.67■■■□□ 2.02
DNMT1-227ENST00000592342 PRKAR2BP31323 418 aa27.67■■■□□ 2.02
DNMT1-227ENST00000592342 IFNL2Q8IZJ0 200 aa27.67■■■□□ 2.02
DNMT1-227ENST00000592342 FCHSD2O94868 740 aa27.66■■■□□ 2.02
DNMT1-227ENST00000592342 WDR43Q15061 677 aaKnown RBP eCLIP27.66■■■□□ 2.02
DNMT1-227ENST00000592342 ZNF530Q6P9A1 599 aaPredicted RBP27.66■■■□□ 2.02
DNMT1-227ENST00000592342 RSPH6AQ9H0K4 717 aa27.66■■■□□ 2.02
DNMT1-227ENST00000592342 BCL9O00512 1426 aa27.66■■■□□ 2.02
DNMT1-227ENST00000592342 C1orf141Q5JVX7 400 aa27.65■■■□□ 2.02
DNMT1-227ENST00000592342 ACSBG1Q96GR2 724 aa27.65■■■□□ 2.02
DNMT1-227ENST00000592342 SHANK3Q9BYB0 1731 aa27.64■■■□□ 2.02
DNMT1-227ENST00000592342 NEFMP07197 916 aa27.64■■■□□ 2.02
DNMT1-227ENST00000592342 PHKG2P15735 406 aa27.63■■■□□ 2.01
DNMT1-227ENST00000592342 PNNQ9H307 717 aaKnown RBP27.63■■■□□ 2.01
DNMT1-227ENST00000592342 SYTL4Q96C24 671 aaPredicted RBP27.62■■■□□ 2.01
DNMT1-227ENST00000592342 DIEXFQ68CQ4 756 aaKnown RBP27.61■■■□□ 2.01
DNMT1-227ENST00000592342 HSP90AB1P08238 724 aaKnown RBP27.6■■■□□ 2.01
DNMT1-227ENST00000592342 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
DNMT1-227ENST00000592342 BCL11BQ9C0K0 894 aaPredicted RBP27.6■■■□□ 2.01
DNMT1-227ENST00000592342 MRS2Q9HD23 443 aa27.6■■■□□ 2.01
DNMT1-227ENST00000592342 GAS2L2Q8NHY3 880 aa27.59■■■□□ 2.01
DNMT1-227ENST00000592342 KCNQ2O43526 872 aa27.58■■■□□ 2.01
DNMT1-227ENST00000592342 APBA3O96018 575 aa27.58■■■□□ 2.01
DNMT1-227ENST00000592342 BAG6P46379 1132 aa27.58■■■□□ 2.01
DNMT1-227ENST00000592342 NKX1-1Q15270 411 aaPredicted RBP27.58■■■□□ 2.01
DNMT1-227ENST00000592342 CCDC184Q52MB2 194 aa27.57■■■□□ 2
DNMT1-227ENST00000592342 AKAP4Q5JQC9 854 aa27.57■■■□□ 2
DNMT1-227ENST00000592342 PRIM1P49642 420 aaKnown RBP27.56■■■□□ 2
DNMT1-227ENST00000592342 PHACTR3Q96KR7 559 aa27.56■■■□□ 2
DNMT1-227ENST00000592342 MAPK8IP3Q9UPT6 1336 aa27.56■■■□□ 2
DNMT1-227ENST00000592342 DCAF5Q96JK2 942 aa27.55■■■□□ 2
DNMT1-227ENST00000592342 SBF2Q86WG5 1849 aa27.53■■■□□ 2
DNMT1-227ENST00000592342 MPRIPQ6WCQ1 1025 aa27.53■■■□□ 2
DNMT1-227ENST00000592342 PTF1AQ7RTS3 328 aa27.53■■■□□ 2
DNMT1-227ENST00000592342 ADAMTS8Q9UP79 889 aa27.53■■■□□ 2
DNMT1-227ENST00000592342 DOT1LQ8TEK3 1739 aa27.53■■■□□ 2
DNMT1-227ENST00000592342 NHSQ6T4R5 1651 aa27.52■■■□□ 2
DNMT1-227ENST00000592342 DEFB132Q7Z7B7 95 aa27.52■■■□□ 2
DNMT1-227ENST00000592342 KAT6BQ8WYB5 2073 aa27.52■■■□□ 2
DNMT1-227ENST00000592342 PLEKHF1Q96S99 279 aa27.51■■□□□ 1.99
DNMT1-227ENST00000592342 EP400Q96L91 3159 aa27.5■■□□□ 1.99
DNMT1-227ENST00000592342 GNAT3A8MTJ3 354 aa27.5■■□□□ 1.99
DNMT1-227ENST00000592342 TNS1Q9HBL0 1735 aaKnown RBP27.5■■□□□ 1.99
DNMT1-227ENST00000592342 EN1Q05925 392 aaPredicted RBP27.49■■□□□ 1.99
DNMT1-227ENST00000592342 CCDC146Q8IYE0 955 aa27.49■■□□□ 1.99
DNMT1-227ENST00000592342 TMOD3Q9NYL9 352 aa27.49■■□□□ 1.99
DNMT1-227ENST00000592342 MAP3K5Q99683 1374 aa27.48■■□□□ 1.99
DNMT1-227ENST00000592342 ERVV-2B6SEH9 535 aa27.48■■□□□ 1.99
DNMT1-227ENST00000592342 CABP4P57796 275 aa27.48■■□□□ 1.99
DNMT1-227ENST00000592342 KDM6AO15550 1401 aaPredicted RBP27.47■■□□□ 1.99
DNMT1-227ENST00000592342 RTF1Q92541 710 aaKnown RBP27.46■■□□□ 1.99
DNMT1-227ENST00000592342 RUNDC1Q96C34 613 aa27.46■■□□□ 1.99
DNMT1-227ENST00000592342 RNMTO43148 476 aaKnown RBP27.45■■□□□ 1.98
DNMT1-227ENST00000592342 PNISRQ8TF01 805 aaKnown RBP27.45■■□□□ 1.98
DNMT1-227ENST00000592342 TOGARAM1Q9Y4F4 1720 aa27.44■■□□□ 1.98
DNMT1-227ENST00000592342 PLSCR1O15162 318 aa27.44■■□□□ 1.98
DNMT1-227ENST00000592342 LGR6Q9HBX8 967 aa27.44■■□□□ 1.98
DNMT1-227ENST00000592342 EZH2Q15910 746 aaKnown RBP27.43■■□□□ 1.98
DNMT1-227ENST00000592342 NFE2L2Q16236 605 aa27.43■■□□□ 1.98
DNMT1-227ENST00000592342 PIGBQ92521 554 aa27.43■■□□□ 1.98
DNMT1-227ENST00000592342 CAMKK2Q96RR4 588 aa27.42■■□□□ 1.98
DNMT1-227ENST00000592342 BTAF1O14981 1849 aa27.41■■□□□ 1.98
DNMT1-227ENST00000592342 FAM9BQ8IZU0 186 aa27.4■■□□□ 1.98
DNMT1-227ENST00000592342 NFATC2IPQ8NCF5 419 aa27.4■■□□□ 1.98
DNMT1-227ENST00000592342 CCER2I3L3R5 266 aa27.39■■□□□ 1.98
DNMT1-227ENST00000592342 HTATSF1O43719 755 aaKnown RBP27.39■■□□□ 1.98
DNMT1-227ENST00000592342 TEFQ10587 303 aa27.39■■□□□ 1.98
DNMT1-227ENST00000592342 SLC52A2Q9HAB3 445 aa27.39■■□□□ 1.98
DNMT1-227ENST00000592342 RIPK4P57078 832 aa27.38■■□□□ 1.97
DNMT1-227ENST00000592342 IL17REQ8NFR9 667 aa27.38■■□□□ 1.97
DNMT1-227ENST00000592342 SMARCC1Q92922 1105 aaPredicted RBP27.38■■□□□ 1.97
DNMT1-227ENST00000592342 ITGB4P16144 1822 aa27.38■■□□□ 1.97
DNMT1-227ENST00000592342 TMPOP42166 694 aaKnown RBP27.37■■□□□ 1.97
DNMT1-227ENST00000592342 NEUROD2Q15784 382 aa27.37■■□□□ 1.97
DNMT1-227ENST00000592342 TXNRD1Q16881 649 aa27.37■■□□□ 1.97
DNMT1-227ENST00000592342 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
DNMT1-227ENST00000592342 MCM10Q7L590 875 aa27.36■■□□□ 1.97
DNMT1-227ENST00000592342 MIER1Q8N108 512 aa27.36■■□□□ 1.97
DNMT1-227ENST00000592342 RRP7AQ9Y3A4 280 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms