RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 KIAA1551Q9HCM1 1747 aa13.57□□□□□ -0.24
SMARCA4-218ENST00000592158 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-218ENST00000592158 ABCC6O95255 1503 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 SOX10P56693 466 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 POGKQ9P215 609 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 SBF1O95248 1867 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
SMARCA4-218ENST00000592158 FLAD1Q8NFF5 587 aa13.55□□□□□ -0.24
SMARCA4-218ENST00000592158 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
SMARCA4-218ENST00000592158 QRICH2Q9H0J4 1663 aa13.55□□□□□ -0.24
SMARCA4-218ENST00000592158 ITSN1Q15811 1721 aa13.54□□□□□ -0.24
SMARCA4-218ENST00000592158 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
SMARCA4-218ENST00000592158 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
SMARCA4-218ENST00000592158 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 GLTPD2A6NH11 291 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 TGFB2P61812 414 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
SMARCA4-218ENST00000592158 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
SMARCA4-218ENST00000592158 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 BRCA1P38398 1863 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 RGPD5Q99666 1765 aa13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
SMARCA4-218ENST00000592158 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
SMARCA4-218ENST00000592158 ERBB3P21860 1342 aa13.5□□□□□ -0.25
SMARCA4-218ENST00000592158 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-218ENST00000592158 DGKZQ13574 1117 aa13.5□□□□□ -0.25
SMARCA4-218ENST00000592158 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-218ENST00000592158 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 POTECB2RU33 542 aa13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 FXR1P51114 621 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
SMARCA4-218ENST00000592158 PIK3C2GO75747 1445 aa13.48□□□□□ -0.25
SMARCA4-218ENST00000592158 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-218ENST00000592158 TMEM88BA6NKF7 163 aa13.48□□□□□ -0.25
SMARCA4-218ENST00000592158 DPEP1P16444 411 aa13.48□□□□□ -0.25
SMARCA4-218ENST00000592158 DEFB115Q30KQ5 88 aa13.47□□□□□ -0.25
SMARCA4-218ENST00000592158 C5P01031 1676 aa13.47□□□□□ -0.25
SMARCA4-218ENST00000592158 ACEP12821 1306 aa13.46□□□□□ -0.25
SMARCA4-218ENST00000592158 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
SMARCA4-218ENST00000592158 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-218ENST00000592158 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
SMARCA4-218ENST00000592158 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-218ENST00000592158 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
SMARCA4-218ENST00000592158 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-218ENST00000592158 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
SMARCA4-218ENST00000592158 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
SMARCA4-218ENST00000592158 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
SMARCA4-218ENST00000592158 RGL3Q3MIN7 710 aa13.44□□□□□ -0.26
SMARCA4-218ENST00000592158 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
SMARCA4-218ENST00000592158 PHF14O94880 888 aa13.43□□□□□ -0.26
SMARCA4-218ENST00000592158 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-218ENST00000592158 MMP10P09238 476 aa13.42□□□□□ -0.26
SMARCA4-218ENST00000592158 IL2RBP14784 551 aa13.42□□□□□ -0.26
SMARCA4-218ENST00000592158 KCNA3P22001 575 aa13.42□□□□□ -0.26
SMARCA4-218ENST00000592158 NSD2O96028 1365 aa13.42□□□□□ -0.26
SMARCA4-218ENST00000592158 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
SMARCA4-218ENST00000592158 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
SMARCA4-218ENST00000592158 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
SMARCA4-218ENST00000592158 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
SMARCA4-218ENST00000592158 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 SLIT3O75094 1523 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 RASSF7Q02833 373 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 CFAP70Q5T0N1 1121 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
SMARCA4-218ENST00000592158 NLRP6P59044 892 aa13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 AK7Q96M32 723 aa13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 USP47Q96K76 1375 aa13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 LTBP1Q14766 1721 aa13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-218ENST00000592158 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
SMARCA4-218ENST00000592158 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-218ENST00000592158 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
SMARCA4-218ENST00000592158 THSD7BQ9C0I4 1608 aa13.38□□□□□ -0.27
SMARCA4-218ENST00000592158 C4BP0C0L5 1744 aa13.37□□□□□ -0.27
SMARCA4-218ENST00000592158 LMNB1P20700 586 aa13.37□□□□□ -0.27
SMARCA4-218ENST00000592158 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
SMARCA4-218ENST00000592158 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
SMARCA4-218ENST00000592158 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
SMARCA4-218ENST00000592158 MPNDQ8N594 471 aa13.36□□□□□ -0.27
SMARCA4-218ENST00000592158 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
SMARCA4-218ENST00000592158 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
SMARCA4-218ENST00000592158 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-218ENST00000592158 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms