RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 NLGN2Q8NFZ4 835 aa22.53■■□□□ 1.2
DDX39A-216ENST00000591275 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
DDX39A-216ENST00000591275 COL24A1Q17RW2 1714 aa22.52■■□□□ 1.2
DDX39A-216ENST00000591275 RGPD2P0DJD1 1756 aa22.52■■□□□ 1.2
DDX39A-216ENST00000591275 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
DDX39A-216ENST00000591275 NSD2O96028 1365 aa22.51■■□□□ 1.19
DDX39A-216ENST00000591275 HOXC9P31274 260 aa22.51■■□□□ 1.19
DDX39A-216ENST00000591275 AMPHP49418 695 aa22.51■■□□□ 1.19
DDX39A-216ENST00000591275 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
DDX39A-216ENST00000591275 COG3Q96JB2 828 aa22.5■■□□□ 1.19
DDX39A-216ENST00000591275 LY75O60449 1722 aa22.5■■□□□ 1.19
DDX39A-216ENST00000591275 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
DDX39A-216ENST00000591275 MEGF6O75095 1541 aa22.49■■□□□ 1.19
DDX39A-216ENST00000591275 MSH5O43196 834 aa22.49■■□□□ 1.19
DDX39A-216ENST00000591275 CCNL1Q9UK58 526 aaPredicted RBP22.49■■□□□ 1.19
DDX39A-216ENST00000591275 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
DDX39A-216ENST00000591275 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
DDX39A-216ENST00000591275 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
DDX39A-216ENST00000591275 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-216ENST00000591275 USHBP1Q8N6Y0 703 aa22.45■■□□□ 1.18
DDX39A-216ENST00000591275 YBX3P16989 372 aaKnown RBP eCLIP22.44■■□□□ 1.18
DDX39A-216ENST00000591275 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
DDX39A-216ENST00000591275 TONSLQ96HA7 1378 aa22.44■■□□□ 1.18
DDX39A-216ENST00000591275 USP47Q96K76 1375 aa22.43■■□□□ 1.18
DDX39A-216ENST00000591275 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
DDX39A-216ENST00000591275 NBPF6Q5VWK0 638 aa22.43■■□□□ 1.18
DDX39A-216ENST00000591275 NBPF4Q96M43 638 aa22.43■■□□□ 1.18
DDX39A-216ENST00000591275 TESK2Q96S53 571 aa22.43■■□□□ 1.18
DDX39A-216ENST00000591275 ST20-MTHFSA0A0A6YYL1 179 aa22.42■■□□□ 1.18
DDX39A-216ENST00000591275 RTL1A6NKG5 1358 aa22.39■■□□□ 1.18
DDX39A-216ENST00000591275 GRIN3BO60391 1043 aa22.39■■□□□ 1.17
DDX39A-216ENST00000591275 RAPGEF4Q8WZA2 1011 aa22.39■■□□□ 1.17
DDX39A-216ENST00000591275 GGNBP2Q9H3C7 697 aa22.38■■□□□ 1.17
DDX39A-216ENST00000591275 C5P01031 1676 aa22.37■■□□□ 1.17
DDX39A-216ENST00000591275 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
DDX39A-216ENST00000591275 CGNL1Q0VF96 1302 aa22.35■■□□□ 1.17
DDX39A-216ENST00000591275 FYB1O15117 783 aa22.35■■□□□ 1.17
DDX39A-216ENST00000591275 TATP17735 454 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-216ENST00000591275 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
DDX39A-216ENST00000591275 MPRIPQ6WCQ1 1025 aa22.33■■□□□ 1.17
DDX39A-216ENST00000591275 PALLDQ8WX93 1383 aa22.33■■□□□ 1.17
DDX39A-216ENST00000591275 PCDH11XQ9BZA7 1347 aa22.32■■□□□ 1.16
DDX39A-216ENST00000591275 PCDH11YQ9BZA8 1340 aa22.32■■□□□ 1.16
DDX39A-216ENST00000591275 ATP10DQ9P241 1426 aa22.32■■□□□ 1.16
DDX39A-216ENST00000591275 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
DDX39A-216ENST00000591275 CD2APQ9Y5K6 639 aa22.3■■□□□ 1.16
DDX39A-216ENST00000591275 INSRP06213 1382 aa22.29■■□□□ 1.16
DDX39A-216ENST00000591275 CYP27B1O15528 508 aa22.29■■□□□ 1.16
DDX39A-216ENST00000591275 SMIM5Q71RC9 77 aa22.29■■□□□ 1.16
DDX39A-216ENST00000591275 AMIGO3Q86WK7 504 aa22.29■■□□□ 1.16
DDX39A-216ENST00000591275 FLAD1Q8NFF5 587 aa22.29■■□□□ 1.16
DDX39A-216ENST00000591275 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
DDX39A-216ENST00000591275 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
DDX39A-216ENST00000591275 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
DDX39A-216ENST00000591275 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
DDX39A-216ENST00000591275 FLT4P35916 1363 aa22.27■■□□□ 1.16
DDX39A-216ENST00000591275 ITGB4P16144 1822 aa22.27■■□□□ 1.16
DDX39A-216ENST00000591275 PHF14O94880 888 aa22.27■■□□□ 1.16
DDX39A-216ENST00000591275 AK7Q96M32 723 aa22.27■■□□□ 1.16
DDX39A-216ENST00000591275 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.15
DDX39A-216ENST00000591275 TMF1P82094 1093 aa22.26■■□□□ 1.15
DDX39A-216ENST00000591275 ZNF526Q8TF50 670 aaPredicted RBP22.26■■□□□ 1.15
DDX39A-216ENST00000591275 GPBP1L1Q9HC44 474 aaPredicted RBP22.25■■□□□ 1.15
DDX39A-216ENST00000591275 HMGB2P26583 209 aaKnown RBP22.24■■□□□ 1.15
DDX39A-216ENST00000591275 SMARCC1Q92922 1105 aaPredicted RBP22.24■■□□□ 1.15
DDX39A-216ENST00000591275 IFFO2Q5TF58 517 aa22.23■■□□□ 1.15
DDX39A-216ENST00000591275 PIGBQ92521 554 aa22.23■■□□□ 1.15
DDX39A-216ENST00000591275 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
DDX39A-216ENST00000591275 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
DDX39A-216ENST00000591275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
DDX39A-216ENST00000591275 IGSF1Q8N6C5 1336 aa22.22■■□□□ 1.15
DDX39A-216ENST00000591275 PKD1L3Q7Z443 1732 aa22.22■■□□□ 1.15
DDX39A-216ENST00000591275 ADCY9O60503 1353 aa22.22■■□□□ 1.15
DDX39A-216ENST00000591275 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
DDX39A-216ENST00000591275 KIF24Q5T7B8 1368 aa22.21■■□□□ 1.15
DDX39A-216ENST00000591275 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
DDX39A-216ENST00000591275 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
DDX39A-216ENST00000591275 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
DDX39A-216ENST00000591275 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
DDX39A-216ENST00000591275 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
DDX39A-216ENST00000591275 SIK1P57059 783 aa22.17■■□□□ 1.14
DDX39A-216ENST00000591275 NKX1-1Q15270 411 aaPredicted RBP22.17■■□□□ 1.14
DDX39A-216ENST00000591275 SPG7Q9UQ90 795 aa22.17■■□□□ 1.14
DDX39A-216ENST00000591275 SSFA2P28290 1259 aa22.16■■□□□ 1.14
DDX39A-216ENST00000591275 HSPA6P17066 643 aa22.15■■□□□ 1.14
DDX39A-216ENST00000591275 ITPK1Q13572 414 aa22.15■■□□□ 1.14
DDX39A-216ENST00000591275 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
DDX39A-216ENST00000591275 TMOD3Q9NYL9 352 aa22.15■■□□□ 1.14
DDX39A-216ENST00000591275 ASAP1Q9ULH1 1129 aa22.15■■□□□ 1.14
DDX39A-216ENST00000591275 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
DDX39A-216ENST00000591275 GNPATO15228 680 aa22.14■■□□□ 1.13
DDX39A-216ENST00000591275 EYA1Q99502 592 aa22.13■■□□□ 1.13
DDX39A-216ENST00000591275 ATP6V1AP38606 617 aa22.12■■□□□ 1.13
DDX39A-216ENST00000591275 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
DDX39A-216ENST00000591275 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
DDX39A-216ENST00000591275 MMP10P09238 476 aa22.1■■□□□ 1.13
DDX39A-216ENST00000591275 PHKG2P15735 406 aa22.09■■□□□ 1.13
DDX39A-216ENST00000591275 IFNL2Q8IZJ0 200 aa22.09■■□□□ 1.13
DDX39A-216ENST00000591275 ATG3Q9NT62 314 aa22.09■■□□□ 1.13
DDX39A-216ENST00000591275 KIF3CO14782 793 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms