RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
RANBP3-219ENST00000590953 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
RANBP3-219ENST00000590953 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
RANBP3-219ENST00000590953 BRWD3Q6RI45 1802 aa13.25□□□□□ -0.29
RANBP3-219ENST00000590953 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
RANBP3-219ENST00000590953 HMOX1P09601 288 aa13.24□□□□□ -0.29
RANBP3-219ENST00000590953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■□□□□ 10
RANBP3-219ENST00000590953 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
RANBP3-219ENST00000590953 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
RANBP3-219ENST00000590953 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
RANBP3-219ENST00000590953 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
RANBP3-219ENST00000590953 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
RANBP3-219ENST00000590953 FCHSD2O94868 740 aa13.22□□□□□ -0.29
RANBP3-219ENST00000590953 WDR43Q15061 677 aaKnown RBP eCLIP13.22□□□□□ -0.29
RANBP3-219ENST00000590953 FAM196AQ6ZSG2 479 aa13.22□□□□□ -0.29
RANBP3-219ENST00000590953 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
RANBP3-219ENST00000590953 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
RANBP3-219ENST00000590953 EP400Q96L91 3159 aa13.22□□□□□ -0.29
RANBP3-219ENST00000590953 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-219ENST00000590953 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
RANBP3-219ENST00000590953 NEFMP07197 916 aa13.2□□□□□ -0.3
RANBP3-219ENST00000590953 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
RANBP3-219ENST00000590953 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
RANBP3-219ENST00000590953 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
RANBP3-219ENST00000590953 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
RANBP3-219ENST00000590953 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
RANBP3-219ENST00000590953 BCL9O00512 1426 aa13.19□□□□□ -0.3
RANBP3-219ENST00000590953 ZNF530Q6P9A1 599 aaPredicted RBP13.18□□□□□ -0.3
RANBP3-219ENST00000590953 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
RANBP3-219ENST00000590953 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
RANBP3-219ENST00000590953 CYP27B1O15528 508 aa13.17□□□□□ -0.3
RANBP3-219ENST00000590953 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
RANBP3-219ENST00000590953 PHKG2P15735 406 aa13.17□□□□□ -0.3
RANBP3-219ENST00000590953 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
RANBP3-219ENST00000590953 C1orf141Q5JVX7 400 aa13.17□□□□□ -0.3
RANBP3-219ENST00000590953 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
RANBP3-219ENST00000590953 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
RANBP3-219ENST00000590953 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
RANBP3-219ENST00000590953 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
RANBP3-219ENST00000590953 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
RANBP3-219ENST00000590953 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
RANBP3-219ENST00000590953 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
RANBP3-219ENST00000590953 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
RANBP3-219ENST00000590953 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
RANBP3-219ENST00000590953 PNISRQ8TF01 805 aaKnown RBP13.14□□□□□ -0.31
RANBP3-219ENST00000590953 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
RANBP3-219ENST00000590953 TRIM37O94972 964 aa13.13□□□□□ -0.31
RANBP3-219ENST00000590953 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
RANBP3-219ENST00000590953 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
RANBP3-219ENST00000590953 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
RANBP3-219ENST00000590953 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
RANBP3-219ENST00000590953 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-219ENST00000590953 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
RANBP3-219ENST00000590953 SOCS7O14512 581 aa13.12□□□□□ -0.31
RANBP3-219ENST00000590953 MIER1Q8N108 512 aa13.12□□□□□ -0.31
RANBP3-219ENST00000590953 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
RANBP3-219ENST00000590953 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
RANBP3-219ENST00000590953 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
RANBP3-219ENST00000590953 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
RANBP3-219ENST00000590953 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
RANBP3-219ENST00000590953 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-219ENST00000590953 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
RANBP3-219ENST00000590953 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
RANBP3-219ENST00000590953 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
RANBP3-219ENST00000590953 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
RANBP3-219ENST00000590953 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
RANBP3-219ENST00000590953 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
RANBP3-219ENST00000590953 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
RANBP3-219ENST00000590953 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
RANBP3-219ENST00000590953 KCNQ2O43526 872 aa13.09□□□□□ -0.31
RANBP3-219ENST00000590953 APBA3O96018 575 aa13.09□□□□□ -0.31
RANBP3-219ENST00000590953 BAG6P46379 1132 aa13.09□□□□□ -0.31
RANBP3-219ENST00000590953 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
RANBP3-219ENST00000590953 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
RANBP3-219ENST00000590953 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
RANBP3-219ENST00000590953 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
RANBP3-219ENST00000590953 RIPK4P57078 832 aa13.07□□□□□ -0.32
RANBP3-219ENST00000590953 CABP4P57796 275 aa13.07□□□□□ -0.32
RANBP3-219ENST00000590953 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
RANBP3-219ENST00000590953 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
RANBP3-219ENST00000590953 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
RANBP3-219ENST00000590953 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
RANBP3-219ENST00000590953 PLSCR1O15162 318 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 TEFQ10587 303 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 PIGBQ92521 554 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
RANBP3-219ENST00000590953 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 ITGB4P16144 1822 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 APAF1O14727 1248 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
RANBP3-219ENST00000590953 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
RANBP3-219ENST00000590953 BTAF1O14981 1849 aa13.04□□□□□ -0.32
RANBP3-219ENST00000590953 MCM10Q7L590 875 aa13.04□□□□□ -0.32
RANBP3-219ENST00000590953 DEFB132Q7Z7B7 95 aa13.04□□□□□ -0.32
RANBP3-219ENST00000590953 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms