RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
LINC01140-210ENST00000590653 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.28
LINC01140-210ENST00000590653 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01140-210ENST00000590653 DEPDC5O75140 1603 aa13.33□□□□□ -0.28
LINC01140-210ENST00000590653 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
LINC01140-210ENST00000590653 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
LINC01140-210ENST00000590653 GADD45BO75293 160 aaPredicted RBP13.33□□□□□ -0.28
LINC01140-210ENST00000590653 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
LINC01140-210ENST00000590653 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
LINC01140-210ENST00000590653 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
LINC01140-210ENST00000590653 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
LINC01140-210ENST00000590653 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 PALD1Q9ULE6 856 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 HS1BP3Q53T59 392 aa13.32□□□□□ -0.28
LINC01140-210ENST00000590653 CSPP1Q1MSJ5 1256 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01140-210ENST00000590653 MED14O60244 1454 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 USP25Q9UHP3 1055 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 SETBP1Q9Y6X0 1596 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
LINC01140-210ENST00000590653 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
LINC01140-210ENST00000590653 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
LINC01140-210ENST00000590653 LRRC7Q96NW7 1537 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 GLI2P10070 1586 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
LINC01140-210ENST00000590653 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 ZNF853P0CG23 659 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 IL13P35225 146 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
LINC01140-210ENST00000590653 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
LINC01140-210ENST00000590653 MBD3O95983 291 aa13.29□□□□□ -0.28
LINC01140-210ENST00000590653 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
LINC01140-210ENST00000590653 MSH6P52701 1360 aa13.29□□□□□ -0.28
LINC01140-210ENST00000590653 PDE1AP54750 535 aa13.29□□□□□ -0.28
LINC01140-210ENST00000590653 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
LINC01140-210ENST00000590653 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
LINC01140-210ENST00000590653 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01140-210ENST00000590653 G2E3Q7L622 706 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 PIK3R4Q99570 1358 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 USP48Q86UV5 1035 aa13.28□□□□□ -0.28
LINC01140-210ENST00000590653 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
LINC01140-210ENST00000590653 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
LINC01140-210ENST00000590653 HMMRO75330 724 aa13.27□□□□□ -0.29
LINC01140-210ENST00000590653 MCCP23508 829 aa13.27□□□□□ -0.29
LINC01140-210ENST00000590653 TERF1P54274 439 aa13.27□□□□□ -0.29
LINC01140-210ENST00000590653 COG3Q96JB2 828 aa13.27□□□□□ -0.29
LINC01140-210ENST00000590653 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
LINC01140-210ENST00000590653 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
LINC01140-210ENST00000590653 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
LINC01140-210ENST00000590653 YTHDC2Q9H6S0 1430 aaKnown RBP13.26□□□□□ -0.29
LINC01140-210ENST00000590653 BRD1O95696 1058 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 IL1RAPL2Q9NP60 686 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 USP32Q8NFA0 1604 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 CBX1P83916 185 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
LINC01140-210ENST00000590653 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
LINC01140-210ENST00000590653 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
LINC01140-210ENST00000590653 FIBPO43427 364 aa13.25□□□□□ -0.29
LINC01140-210ENST00000590653 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
LINC01140-210ENST00000590653 ADCY5O95622 1261 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 MCM5P33992 734 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 PPLO60437 1756 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 FOXO3O43524 673 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
LINC01140-210ENST00000590653 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01140-210ENST00000590653 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
LINC01140-210ENST00000590653 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
LINC01140-210ENST00000590653 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
LINC01140-210ENST00000590653 MX1P20591 662 aa13.23□□□□□ -0.29
LINC01140-210ENST00000590653 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
LINC01140-210ENST00000590653 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
LINC01140-210ENST00000590653 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
LINC01140-210ENST00000590653 CPA1P15085 419 aa13.22□□□□□ -0.29
LINC01140-210ENST00000590653 GIMAP6Q6P9H5 292 aa13.22□□□□□ -0.29
LINC01140-210ENST00000590653 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
LINC01140-210ENST00000590653 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
LINC01140-210ENST00000590653 PNMA6EA0A0J9YXQ4 647 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 PHF14O94880 888 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
LINC01140-210ENST00000590653 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 CHMLP26374 656 aa13.21□□□□□ -0.29
LINC01140-210ENST00000590653 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms