RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 CCDC112Q8NEF3 446 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 TMX3Q96JJ7 454 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 IFT57Q9NWB7 429 aa9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 KDM5AP29375 1690 aaKnown RBP9.3□□□□□ -0.92
NEDD4L-229ENST00000590506 TPM3P06753 285 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 RAD51AP2Q09MP3 1159 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 MLECQ14165 292 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 GOLGA6L6A8MZA4 724 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 IPO8O15397 1037 aaKnown RBP9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 NOS1P29475 1434 aa9.29□□□□□ -0.92
NEDD4L-229ENST00000590506 U2AF1L5P0DN76 240 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 MX1P20591 662 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 NEK4P51957 841 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 SRPK2P78362 688 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 U2AF1Q01081 240 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 LRMPQ12912 555 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 SIRT2Q8IXJ6 389 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 CYP2C19P33261 490 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 MTHFSP49914 203 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 RBM6P78332 1123 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 TTC22Q5TAA0 569 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 C16orf71Q8IYS4 520 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 NOL10Q9BSC4 688 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 FAM53CQ9NYF3 392 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 RSPH14Q9UHP6 348 aa9.28□□□□□ -0.92
NEDD4L-229ENST00000590506 ATP10BO94823 1461 aa9.27□□□□□ -0.92
NEDD4L-229ENST00000590506 FBXO38Q6PIJ6 1188 aa9.27□□□□□ -0.92
NEDD4L-229ENST00000590506 CARMIL2Q6F5E8 1435 aa9.27□□□□□ -0.93
NEDD4L-229ENST00000590506 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
NEDD4L-229ENST00000590506 UNC13BO14795 1591 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 CCDC186Q7Z3E2 898 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 CNPY2Q9Y2B0 182 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 CLTCL1P53675 1640 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 ATP10AO60312 1499 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 SOX12O15370 315 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 ELF2Q15723 593 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 TPD52L1Q16890 204 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 OTUD7AQ8TE49 926 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 GTF3C6Q969F1 213 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 JPH4Q96JJ6 628 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 EFCC1Q9HA90 598 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 ZNF215Q9UL58 517 aaPredicted RBP9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 PAXBP1Q9Y5B6 917 aa9.26□□□□□ -0.93
NEDD4L-229ENST00000590506 MADDQ8WXG6 1647 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 NPHP1O15259 732 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 DRC7Q8IY82 874 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 NRBP1Q9UHY1 535 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 LOC102724159A0A0B4J2E5 919 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 RGL2O15211 777 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 SDSP20132 328 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 PWP2Q15269 919 aaKnown RBP9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 CFAP53Q96M91 514 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 FUCA2Q9BTY2 467 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 SAMD9LQ8IVG5 1584 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 PPRC1Q5VV67 1664 aaKnown RBP9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 CEP135Q66GS9 1140 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 CASC1Q6TDU7 716 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 KIF1BPQ96EK5 621 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 YY1AP1Q9H869 796 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 ZNF446Q9NWS9 450 aa9.25□□□□□ -0.93
NEDD4L-229ENST00000590506 IQGAP3Q86VI3 1631 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 NSD3Q9BZ95 1437 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 ABCC11Q96J66 1382 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 NOP2P46087 812 aaKnown RBP9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 GYS2P54840 703 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 FAM193AP78312 1265 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 RASSF4Q9H2L5 321 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 CUL4AQ13619 759 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 GEMIN8Q9NWZ8 242 aaKnown RBP9.24□□□□□ -0.93
NEDD4L-229ENST00000590506 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 ZNF518AQ6AHZ1 1483 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 SYCP2Q9BX26 1530 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 APBB1O00213 710 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 TRIM66O15016 1216 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 DHX16O60231 1041 aaKnown RBP9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 REC8O95072 547 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 GTF2A1P52655 376 aaPredicted RBP9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 CFAP70Q5T0N1 1121 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 SYT10Q6XYQ8 523 aa9.23□□□□□ -0.93
NEDD4L-229ENST00000590506 CREBRFQ8IUR6 639 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms