RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
LSM14A-208ENST00000590416 ZCRB1Q8TBF4 217 aaKnown RBP22.54■■□□□ 1.2
LSM14A-208ENST00000590416 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
LSM14A-208ENST00000590416 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
LSM14A-208ENST00000590416 KAT6BQ8WYB5 2073 aa22.51■■□□□ 1.19
LSM14A-208ENST00000590416 FAM196AQ6ZSG2 479 aa22.51■■□□□ 1.19
LSM14A-208ENST00000590416 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
LSM14A-208ENST00000590416 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
LSM14A-208ENST00000590416 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
LSM14A-208ENST00000590416 MARCH10Q8NA82 808 aaPredicted RBP22.5■■□□□ 1.19
LSM14A-208ENST00000590416 SPG7Q9UQ90 795 aa22.5■■□□□ 1.19
LSM14A-208ENST00000590416 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
LSM14A-208ENST00000590416 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
LSM14A-208ENST00000590416 SOCS7O14512 581 aa22.48■■□□□ 1.19
LSM14A-208ENST00000590416 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
LSM14A-208ENST00000590416 KDRP35968 1356 aa22.47■■□□□ 1.19
LSM14A-208ENST00000590416 SF3B2Q13435 895 aaKnown RBP22.45■■□□□ 1.18
LSM14A-208ENST00000590416 UPF1Q92900 1129 aaKnown RBP eCLIP22.45■■□□□ 1.18
LSM14A-208ENST00000590416 SBF2Q86WG5 1849 aa22.45■■□□□ 1.18
LSM14A-208ENST00000590416 TRIM37O94972 964 aa22.44■■□□□ 1.18
LSM14A-208ENST00000590416 AMOTQ4VCS5 1084 aa22.43■■□□□ 1.18
LSM14A-208ENST00000590416 ZNF530Q6P9A1 599 aaPredicted RBP22.43■■□□□ 1.18
LSM14A-208ENST00000590416 ACSBG1Q96GR2 724 aa22.43■■□□□ 1.18
LSM14A-208ENST00000590416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.183e-7■■■□□ 14.7
LSM14A-208ENST00000590416 EP400Q96L91 3159 aa22.43■■□□□ 1.18
LSM14A-208ENST00000590416 PLEKHG2Q9H7P9 1386 aa22.42■■□□□ 1.18
LSM14A-208ENST00000590416 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
LSM14A-208ENST00000590416 DOT1LQ8TEK3 1739 aa22.42■■□□□ 1.18
LSM14A-208ENST00000590416 PRKAR2BP31323 418 aa22.41■■□□□ 1.18
LSM14A-208ENST00000590416 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
LSM14A-208ENST00000590416 CYP27B1O15528 508 aa22.4■■□□□ 1.18
LSM14A-208ENST00000590416 NEFMP07197 916 aa22.4■■□□□ 1.18
LSM14A-208ENST00000590416 C1orf141Q5JVX7 400 aa22.4■■□□□ 1.18
LSM14A-208ENST00000590416 RSPH6AQ9H0K4 717 aa22.4■■□□□ 1.18
LSM14A-208ENST00000590416 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
LSM14A-208ENST00000590416 TNS1Q9HBL0 1735 aaKnown RBP22.38■■□□□ 1.17
LSM14A-208ENST00000590416 FCHSD2O94868 740 aa22.38■■□□□ 1.17
LSM14A-208ENST00000590416 PHKG2P15735 406 aa22.38■■□□□ 1.17
LSM14A-208ENST00000590416 DIEXFQ68CQ4 756 aaKnown RBP22.38■■□□□ 1.17
LSM14A-208ENST00000590416 CCDC125Q86Z20 511 aa22.38■■□□□ 1.17
LSM14A-208ENST00000590416 NHSQ6T4R5 1651 aa22.38■■□□□ 1.17
LSM14A-208ENST00000590416 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
LSM14A-208ENST00000590416 BCL9O00512 1426 aa22.37■■□□□ 1.17
LSM14A-208ENST00000590416 APBA3O96018 575 aa22.35■■□□□ 1.17
LSM14A-208ENST00000590416 HSP90AB1P08238 724 aaKnown RBP22.35■■□□□ 1.17
LSM14A-208ENST00000590416 MTHFSDQ2M296 383 aaKnown RBP22.35■■□□□ 1.17
LSM14A-208ENST00000590416 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
LSM14A-208ENST00000590416 KCNQ2O43526 872 aa22.34■■□□□ 1.17
LSM14A-208ENST00000590416 BAG6P46379 1132 aa22.34■■□□□ 1.17
LSM14A-208ENST00000590416 CCDC184Q52MB2 194 aa22.34■■□□□ 1.17
LSM14A-208ENST00000590416 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
LSM14A-208ENST00000590416 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
LSM14A-208ENST00000590416 MAPK8IP3Q9UPT6 1336 aa22.33■■□□□ 1.17
LSM14A-208ENST00000590416 AKAP4Q5JQC9 854 aa22.33■■□□□ 1.17
LSM14A-208ENST00000590416 BCL11BQ9C0K0 894 aaPredicted RBP22.33■■□□□ 1.17
LSM14A-208ENST00000590416 VIRMAQ69YN4 1812 aaKnown RBP22.33■■□□□ 1.16
LSM14A-208ENST00000590416 BTAF1O14981 1849 aa22.32■■□□□ 1.16
LSM14A-208ENST00000590416 ITGB4P16144 1822 aa22.32■■□□□ 1.16
LSM14A-208ENST00000590416 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
LSM14A-208ENST00000590416 PHACTR3Q96KR7 559 aa22.32■■□□□ 1.16
LSM14A-208ENST00000590416 NKX1-1Q15270 411 aaPredicted RBP22.31■■□□□ 1.16
LSM14A-208ENST00000590416 PTF1AQ7RTS3 328 aa22.31■■□□□ 1.16
LSM14A-208ENST00000590416 DEFB132Q7Z7B7 95 aa22.31■■□□□ 1.16
LSM14A-208ENST00000590416 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
LSM14A-208ENST00000590416 DCAF5Q96JK2 942 aa22.3■■□□□ 1.16
LSM14A-208ENST00000590416 CCDC146Q8IYE0 955 aa22.29■■□□□ 1.16
LSM14A-208ENST00000590416 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
LSM14A-208ENST00000590416 SCN11AQ9UI33 1791 aa22.29■■□□□ 1.16
LSM14A-208ENST00000590416 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
LSM14A-208ENST00000590416 MAP3K5Q99683 1374 aa22.27■■□□□ 1.16
LSM14A-208ENST00000590416 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
LSM14A-208ENST00000590416 KDM6AO15550 1401 aaPredicted RBP22.27■■□□□ 1.16
LSM14A-208ENST00000590416 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
LSM14A-208ENST00000590416 TMOD3Q9NYL9 352 aa22.27■■□□□ 1.16
LSM14A-208ENST00000590416 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
LSM14A-208ENST00000590416 CABP4P57796 275 aa22.25■■□□□ 1.15
LSM14A-208ENST00000590416 RNMTO43148 476 aaKnown RBP22.24■■□□□ 1.15
LSM14A-208ENST00000590416 RTF1Q92541 710 aaKnown RBP22.24■■□□□ 1.15
LSM14A-208ENST00000590416 RUNDC1Q96C34 613 aa22.24■■□□□ 1.15
LSM14A-208ENST00000590416 ERVV-2B6SEH9 535 aa22.23■■□□□ 1.15
LSM14A-208ENST00000590416 EZH2Q15910 746 aaKnown RBP22.23■■□□□ 1.15
LSM14A-208ENST00000590416 LGR6Q9HBX8 967 aa22.23■■□□□ 1.15
LSM14A-208ENST00000590416 NFE2L2Q16236 605 aa22.22■■□□□ 1.15
LSM14A-208ENST00000590416 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
LSM14A-208ENST00000590416 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
LSM14A-208ENST00000590416 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
LSM14A-208ENST00000590416 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
LSM14A-208ENST00000590416 PIGBQ92521 554 aa22.21■■□□□ 1.15
LSM14A-208ENST00000590416 PLSCR1O15162 318 aa22.2■■□□□ 1.14
LSM14A-208ENST00000590416 NEUROD2Q15784 382 aa22.2■■□□□ 1.14
LSM14A-208ENST00000590416 TEFQ10587 303 aa22.19■■□□□ 1.14
LSM14A-208ENST00000590416 NFATC2IPQ8NCF5 419 aa22.19■■□□□ 1.14
LSM14A-208ENST00000590416 CAMKK2Q96RR4 588 aa22.19■■□□□ 1.14
LSM14A-208ENST00000590416 RRP7AQ9Y3A4 280 aaKnown RBP22.19■■□□□ 1.14
LSM14A-208ENST00000590416 RREB1Q92766 1687 aa22.18■■□□□ 1.14
LSM14A-208ENST00000590416 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
LSM14A-208ENST00000590416 RIPK4P57078 832 aa22.18■■□□□ 1.14
LSM14A-208ENST00000590416 MCM10Q7L590 875 aa22.18■■□□□ 1.14
LSM14A-208ENST00000590416 MIER1Q8N108 512 aa22.18■■□□□ 1.14
LSM14A-208ENST00000590416 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms