RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 MYOM1P52179 1685 aa24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 PAPPAQ13219 1627 aa24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 PRIM1P49642 420 aaKnown RBP24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 CARD14Q9BXL6 1004 aa24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 MTFR1LQ9H019 292 aa24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
PRKCSH-211ENST00000590098 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 SHANK3Q9BYB0 1731 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 NSD3Q9BZ95 1437 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 HSP90AB2PQ58FF8 381 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 SLC27A3Q5K4L6 730 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 USHBP1Q8N6Y0 703 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 SGIP1Q9BQI5 828 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 INSRP06213 1382 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 FLT4P35916 1363 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 KIF24Q5T7B8 1368 aa24.9■■□□□ 1.58
PRKCSH-211ENST00000590098 KCNQ4P56696 695 aa24.89■■□□□ 1.58
PRKCSH-211ENST00000590098 TATP17735 454 aaPredicted RBP24.88■■□□□ 1.57
PRKCSH-211ENST00000590098 YY1P25490 414 aa24.88■■□□□ 1.57
PRKCSH-211ENST00000590098 AKT1S1Q96B36 256 aa24.85■■□□□ 1.57
PRKCSH-211ENST00000590098 SYT17Q9BSW7 474 aa24.85■■□□□ 1.57
PRKCSH-211ENST00000590098 FHDC1Q9C0D6 1143 aaPredicted RBP24.85■■□□□ 1.57
PRKCSH-211ENST00000590098 POLR3GLQ9BT43 218 aa24.84■■□□□ 1.57
PRKCSH-211ENST00000590098 NSD2O96028 1365 aa24.83■■□□□ 1.57
PRKCSH-211ENST00000590098 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.57
PRKCSH-211ENST00000590098 EMILIN1Q9Y6C2 1016 aa24.83■■□□□ 1.57
PRKCSH-211ENST00000590098 LY75O60449 1722 aa24.81■■□□□ 1.56
PRKCSH-211ENST00000590098 PCDH11XQ9BZA7 1347 aa24.81■■□□□ 1.56
PRKCSH-211ENST00000590098 PCDH11YQ9BZA8 1340 aa24.81■■□□□ 1.56
PRKCSH-211ENST00000590098 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
PRKCSH-211ENST00000590098 ARXQ96QS3 562 aa24.8■■□□□ 1.56
PRKCSH-211ENST00000590098 TFCP2L1Q9NZI6 479 aa24.8■■□□□ 1.56
PRKCSH-211ENST00000590098 MAP2P11137 1827 aaKnown RBP24.79■■□□□ 1.56
PRKCSH-211ENST00000590098 SLC16A10Q8TF71 515 aa24.79■■□□□ 1.56
PRKCSH-211ENST00000590098 CCNL1Q9UK58 526 aaPredicted RBP24.79■■□□□ 1.56
PRKCSH-211ENST00000590098 EIF4G2P78344 907 aaKnown RBP eCLIP24.78■■□□□ 1.56
PRKCSH-211ENST00000590098 PNPLA7Q6ZV29 1317 aa24.78■■□□□ 1.56
PRKCSH-211ENST00000590098 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
PRKCSH-211ENST00000590098 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
PRKCSH-211ENST00000590098 WASHC2AQ641Q2 1341 aa24.75■■□□□ 1.55
PRKCSH-211ENST00000590098 TUBGCP6Q96RT7 1819 aa24.75■■□□□ 1.55
PRKCSH-211ENST00000590098 HSPA5P11021 654 aaKnown RBP24.73■■□□□ 1.55
PRKCSH-211ENST00000590098 POLD1P28340 1107 aa24.73■■□□□ 1.55
PRKCSH-211ENST00000590098 CYP27B1O15528 508 aa24.72■■□□□ 1.55
PRKCSH-211ENST00000590098 HMGB2P26583 209 aaKnown RBP24.72■■□□□ 1.55
PRKCSH-211ENST00000590098 MPRIPQ6WCQ1 1025 aa24.72■■□□□ 1.55
PRKCSH-211ENST00000590098 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
PRKCSH-211ENST00000590098 PKD1L3Q7Z443 1732 aa24.72■■□□□ 1.55
PRKCSH-211ENST00000590098 UTRNP46939 3433 aa24.71■■□□□ 1.55
PRKCSH-211ENST00000590098 POLKQ9UBT6 870 aa24.71■■□□□ 1.55
PRKCSH-211ENST00000590098 MSH5O43196 834 aa24.7■■□□□ 1.54
PRKCSH-211ENST00000590098 TNNT2P45379 298 aaPredicted RBP24.7■■□□□ 1.54
PRKCSH-211ENST00000590098 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
PRKCSH-211ENST00000590098 MAP3K5Q99683 1374 aa24.69■■□□□ 1.54
PRKCSH-211ENST00000590098 EYA1Q99502 592 aa24.69■■□□□ 1.54
PRKCSH-211ENST00000590098 ITGB4P16144 1822 aa24.69■■□□□ 1.54
PRKCSH-211ENST00000590098 PALLDQ8WX93 1383 aa24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 COL24A1Q17RW2 1714 aa24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 C5P01031 1676 aa24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 COL23A1Q86Y22 540 aaPredicted RBP24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 KLHL34Q8N239 644 aa24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 SMARCC1Q92922 1105 aaPredicted RBP24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 PANK3Q9H999 370 aa24.67■■□□□ 1.54
PRKCSH-211ENST00000590098 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
PRKCSH-211ENST00000590098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.66■■□□□ 1.54
PRKCSH-211ENST00000590098 NKX1-1Q15270 411 aaPredicted RBP24.65■■□□□ 1.54
PRKCSH-211ENST00000590098 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.54
PRKCSH-211ENST00000590098 EIF4A2Q14240 407 aaKnown RBP24.63■■□□□ 1.53
PRKCSH-211ENST00000590098 PIGBQ92521 554 aa24.62■■□□□ 1.53
PRKCSH-211ENST00000590098 CHD4Q14839 1912 aa24.62■■□□□ 1.53
PRKCSH-211ENST00000590098 GPR162Q16538 588 aa24.61■■□□□ 1.53
PRKCSH-211ENST00000590098 IFNL2Q8IZJ0 200 aa24.61■■□□□ 1.53
PRKCSH-211ENST00000590098 FLAD1Q8NFF5 587 aa24.61■■□□□ 1.53
PRKCSH-211ENST00000590098 ZNF784Q8NCA9 323 aaPredicted RBP24.6■■□□□ 1.53
PRKCSH-211ENST00000590098 NLGN2Q8NFZ4 835 aa24.6■■□□□ 1.53
PRKCSH-211ENST00000590098 TMOD3Q9NYL9 352 aa24.6■■□□□ 1.53
PRKCSH-211ENST00000590098 AMIGO3Q86WK7 504 aa24.59■■□□□ 1.53
PRKCSH-211ENST00000590098 PHKG2P15735 406 aa24.58■■□□□ 1.53
PRKCSH-211ENST00000590098 MSL1Q68DK7 614 aa24.58■■□□□ 1.53
PRKCSH-211ENST00000590098 SMIM5Q71RC9 77 aa24.58■■□□□ 1.53
PRKCSH-211ENST00000590098 MORC1Q86VD1 984 aa24.58■■□□□ 1.53
PRKCSH-211ENST00000590098 AK7Q96M32 723 aa24.58■■□□□ 1.53
PRKCSH-211ENST00000590098 C4BP0C0L5 1744 aa24.57■■□□□ 1.52
PRKCSH-211ENST00000590098 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
PRKCSH-211ENST00000590098 PLEKHG2Q9H7P9 1386 aa24.55■■□□□ 1.52
PRKCSH-211ENST00000590098 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
PRKCSH-211ENST00000590098 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
PRKCSH-211ENST00000590098 LOC102724428A0A0B4J2F2 783 aa24.54■■□□□ 1.52
PRKCSH-211ENST00000590098 SIK1P57059 783 aa24.54■■□□□ 1.52
PRKCSH-211ENST00000590098 GOLGB1Q14789 3259 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-211ENST00000590098 ASAP1Q9ULH1 1129 aa24.53■■□□□ 1.52
PRKCSH-211ENST00000590098 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
PRKCSH-211ENST00000590098 HSP90AB1P08238 724 aaKnown RBP24.51■■□□□ 1.51
PRKCSH-211ENST00000590098 UBR3Q6ZT12 1888 aa24.51■■□□□ 1.51
PRKCSH-211ENST00000590098 PHF14O94880 888 aa24.5■■□□□ 1.51
PRKCSH-211ENST00000590098 ATP6V1AP38606 617 aa24.49■■□□□ 1.51
PRKCSH-211ENST00000590098 LINC00116Q8NCU8 138 aa24.49■■□□□ 1.51
PRKCSH-211ENST00000590098 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
PRKCSH-211ENST00000590098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.48■■□□□ 1.51
PRKCSH-211ENST00000590098 ERVV-2B6SEH9 535 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms