RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 DDX54Q8TDD1 881 aaKnown RBP20.73■□□□□ 0.91
NFIX-212ENST00000590027 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
NFIX-212ENST00000590027 NSD2O96028 1365 aa20.72■□□□□ 0.91
NFIX-212ENST00000590027 NBPF14Q5TI25 921 aa20.72■□□□□ 0.91
NFIX-212ENST00000590027 PKD1L3Q7Z443 1732 aa20.72■□□□□ 0.91
NFIX-212ENST00000590027 NCAPD2Q15021 1401 aa20.71■□□□□ 0.91
NFIX-212ENST00000590027 ANO8Q9HCE9 1232 aaPredicted RBP20.71■□□□□ 0.91
NFIX-212ENST00000590027 TNNT2P45379 298 aaPredicted RBP20.7■□□□□ 0.9
NFIX-212ENST00000590027 PROM2Q8N271 834 aa20.7■□□□□ 0.9
NFIX-212ENST00000590027 ZCRB1Q8TBF4 217 aaKnown RBP20.7■□□□□ 0.9
NFIX-212ENST00000590027 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
NFIX-212ENST00000590027 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
NFIX-212ENST00000590027 CASZ1Q86V15 1759 aa20.69■□□□□ 0.9
NFIX-212ENST00000590027 TXNRD1Q16881 649 aa20.69■□□□□ 0.9
NFIX-212ENST00000590027 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
NFIX-212ENST00000590027 WASHC2AQ641Q2 1341 aa20.69■□□□□ 0.9
NFIX-212ENST00000590027 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
NFIX-212ENST00000590027 TOGARAM1Q9Y4F4 1720 aa20.67■□□□□ 0.9
NFIX-212ENST00000590027 LY75O60449 1722 aa20.64■□□□□ 0.9
NFIX-212ENST00000590027 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
NFIX-212ENST00000590027 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
NFIX-212ENST00000590027 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
NFIX-212ENST00000590027 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
NFIX-212ENST00000590027 EIF4A2Q14240 407 aaKnown RBP20.62■□□□□ 0.89
NFIX-212ENST00000590027 EYA1Q99502 592 aa20.62■□□□□ 0.89
NFIX-212ENST00000590027 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
NFIX-212ENST00000590027 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
NFIX-212ENST00000590027 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
NFIX-212ENST00000590027 STK32BQ9NY57 414 aa20.6■□□□□ 0.89
NFIX-212ENST00000590027 ITGB4P16144 1822 aa20.6■□□□□ 0.89
NFIX-212ENST00000590027 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
NFIX-212ENST00000590027 CYP27B1O15528 508 aa20.58■□□□□ 0.89
NFIX-212ENST00000590027 SLC15A2Q16348 729 aa20.58■□□□□ 0.89
NFIX-212ENST00000590027 IGSF1Q8N6C5 1336 aa20.57■□□□□ 0.88
NFIX-212ENST00000590027 PDGFDQ9GZP0 370 aaPredicted RBP20.57■□□□□ 0.88
NFIX-212ENST00000590027 LRRC4BQ9NT99 713 aa20.57■□□□□ 0.88
NFIX-212ENST00000590027 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
NFIX-212ENST00000590027 ZNF827Q17R98 1081 aa20.55■□□□□ 0.88
NFIX-212ENST00000590027 SPON1Q9HCB6 807 aa20.54■□□□□ 0.88
NFIX-212ENST00000590027 SPG7Q9UQ90 795 aa20.54■□□□□ 0.88
NFIX-212ENST00000590027 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
NFIX-212ENST00000590027 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
NFIX-212ENST00000590027 PLEKHG2Q9H7P9 1386 aa20.53■□□□□ 0.88
NFIX-212ENST00000590027 C5P01031 1676 aa20.52■□□□□ 0.88
NFIX-212ENST00000590027 KCNQ4P56696 695 aa20.52■□□□□ 0.88
NFIX-212ENST00000590027 ZBTB7AO95365 584 aa20.51■□□□□ 0.87
NFIX-212ENST00000590027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
NFIX-212ENST00000590027 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
NFIX-212ENST00000590027 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
NFIX-212ENST00000590027 PALLDQ8WX93 1383 aa20.49■□□□□ 0.87
NFIX-212ENST00000590027 NKX1-1Q15270 411 aaPredicted RBP20.49■□□□□ 0.87
NFIX-212ENST00000590027 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
NFIX-212ENST00000590027 CCNL1Q9UK58 526 aaPredicted RBP20.49■□□□□ 0.87
NFIX-212ENST00000590027 PHKG2P15735 406 aa20.48■□□□□ 0.87
NFIX-212ENST00000590027 AEBP1Q8IUX7 1158 aa20.48■□□□□ 0.87
NFIX-212ENST00000590027 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
NFIX-212ENST00000590027 PPP1R1BQ9UD71 204 aaPredicted RBP20.48■□□□□ 0.87
NFIX-212ENST00000590027 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
NFIX-212ENST00000590027 IFNL2Q8IZJ0 200 aa20.47■□□□□ 0.87
NFIX-212ENST00000590027 IL13P35225 146 aa20.46■□□□□ 0.87
NFIX-212ENST00000590027 KDRP35968 1356 aa20.46■□□□□ 0.87
NFIX-212ENST00000590027 MTHFSP49914 203 aa20.45■□□□□ 0.86
NFIX-212ENST00000590027 ATF5Q9Y2D1 282 aaPredicted RBP20.45■□□□□ 0.86
NFIX-212ENST00000590027 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
NFIX-212ENST00000590027 PTGER2P43116 358 aa20.44■□□□□ 0.86
NFIX-212ENST00000590027 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
NFIX-212ENST00000590027 PIGBQ92521 554 aa20.44■□□□□ 0.86
NFIX-212ENST00000590027 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
NFIX-212ENST00000590027 PNPLA7Q6ZV29 1317 aa20.44■□□□□ 0.86
NFIX-212ENST00000590027 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
NFIX-212ENST00000590027 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
NFIX-212ENST00000590027 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
NFIX-212ENST00000590027 COL24A1Q17RW2 1714 aa20.43■□□□□ 0.86
NFIX-212ENST00000590027 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
NFIX-212ENST00000590027 ZNF530Q6P9A1 599 aaPredicted RBP20.42■□□□□ 0.86
NFIX-212ENST00000590027 TMOD3Q9NYL9 352 aa20.42■□□□□ 0.86
NFIX-212ENST00000590027 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
NFIX-212ENST00000590027 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
NFIX-212ENST00000590027 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.86
NFIX-212ENST00000590027 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
NFIX-212ENST00000590027 SGIP1Q9BQI5 828 aa20.39■□□□□ 0.85
NFIX-212ENST00000590027 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.85
NFIX-212ENST00000590027 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
NFIX-212ENST00000590027 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
NFIX-212ENST00000590027 DCAF5Q96JK2 942 aa20.37■□□□□ 0.85
NFIX-212ENST00000590027 ASAP1Q9ULH1 1129 aa20.37■□□□□ 0.85
NFIX-212ENST00000590027 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
NFIX-212ENST00000590027 HMOX1P09601 288 aa20.36■□□□□ 0.85
NFIX-212ENST00000590027 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
NFIX-212ENST00000590027 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
NFIX-212ENST00000590027 ERVV-2B6SEH9 535 aa20.35■□□□□ 0.85
NFIX-212ENST00000590027 SIK1P57059 783 aa20.35■□□□□ 0.85
NFIX-212ENST00000590027 SLC16A10Q8TF71 515 aa20.35■□□□□ 0.85
NFIX-212ENST00000590027 ZNF831Q5JPB2 1677 aa20.35■□□□□ 0.85
NFIX-212ENST00000590027 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
NFIX-212ENST00000590027 COL5A3P25940 1745 aaPredicted RBP20.33■□□□□ 0.85
NFIX-212ENST00000590027 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.85
NFIX-212ENST00000590027 FHDC1Q9C0D6 1143 aaPredicted RBP20.33■□□□□ 0.85
NFIX-212ENST00000590027 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
NFIX-212ENST00000590027 AK7Q96M32 723 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms