RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 PROSER2Q86WR7 435 aaPredicted RBP12.68□□□□□ -0.38
SMAD4-209ENST00000589941 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
SMAD4-209ENST00000589941 ARHGEF5Q12774 1597 aa12.67□□□□□ -0.38
SMAD4-209ENST00000589941 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
SMAD4-209ENST00000589941 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-209ENST00000589941 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-209ENST00000589941 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
SMAD4-209ENST00000589941 KCNA6P17658 529 aa12.66□□□□□ -0.38
SMAD4-209ENST00000589941 KMT5BQ4FZB7 885 aa12.66□□□□□ -0.38
SMAD4-209ENST00000589941 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-209ENST00000589941 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-209ENST00000589941 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
SMAD4-209ENST00000589941 BEGAINQ9BUH8 593 aa12.66□□□□□ -0.38
SMAD4-209ENST00000589941 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
SMAD4-209ENST00000589941 ADGRB3O60242 1522 aa12.65□□□□□ -0.38
SMAD4-209ENST00000589941 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
SMAD4-209ENST00000589941 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
SMAD4-209ENST00000589941 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
SMAD4-209ENST00000589941 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
SMAD4-209ENST00000589941 FUT2Q10981 343 aa12.63□□□□□ -0.39
SMAD4-209ENST00000589941 PUS10Q3MIT2 529 aaKnown RBP12.62□□□□□ -0.39
SMAD4-209ENST00000589941 PRR14Q9BWN1 585 aa12.62□□□□□ -0.39
SMAD4-209ENST00000589941 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
SMAD4-209ENST00000589941 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
SMAD4-209ENST00000589941 PCDHB3Q9Y5E6 796 aa12.61□□□□□ -0.39
SMAD4-209ENST00000589941 KDM4AO75164 1064 aa12.6□□□□□ -0.39
SMAD4-209ENST00000589941 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
SMAD4-209ENST00000589941 MTRQ99707 1265 aa12.6□□□□□ -0.39
SMAD4-209ENST00000589941 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
SMAD4-209ENST00000589941 COPS2P61201 443 aa12.59□□□□□ -0.39
SMAD4-209ENST00000589941 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
SMAD4-209ENST00000589941 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
SMAD4-209ENST00000589941 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
SMAD4-209ENST00000589941 HLA-CQ95604 372 aa12.59□□□□□ -0.39
SMAD4-209ENST00000589941 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
SMAD4-209ENST00000589941 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.4
SMAD4-209ENST00000589941 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
SMAD4-209ENST00000589941 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
SMAD4-209ENST00000589941 CROCC2H7BZ55 1655 aa12.57□□□□□ -0.4
SMAD4-209ENST00000589941 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
SMAD4-209ENST00000589941 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
SMAD4-209ENST00000589941 SETD5Q9C0A6 1442 aa12.56□□□□□ -0.4
SMAD4-209ENST00000589941 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
SMAD4-209ENST00000589941 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
SMAD4-209ENST00000589941 MORN1Q5T089 497 aa12.56□□□□□ -0.4
SMAD4-209ENST00000589941 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
SMAD4-209ENST00000589941 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
SMAD4-209ENST00000589941 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
SMAD4-209ENST00000589941 HOXA2O43364 376 aa12.55□□□□□ -0.4
SMAD4-209ENST00000589941 TBC1D2Q9BYX2 928 aa12.55□□□□□ -0.4
SMAD4-209ENST00000589941 PNPLA6Q8IY17 1366 aa12.55□□□□□ -0.4
SMAD4-209ENST00000589941 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-209ENST00000589941 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
SMAD4-209ENST00000589941 BRINP3Q76B58 766 aa12.54□□□□□ -0.4
SMAD4-209ENST00000589941 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
SMAD4-209ENST00000589941 ZFYVE9O95405 1425 aa12.54□□□□□ -0.4
SMAD4-209ENST00000589941 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
SMAD4-209ENST00000589941 NDUFV2P19404 249 aa12.53□□□□□ -0.4
SMAD4-209ENST00000589941 USP46P62068 366 aa12.53□□□□□ -0.4
SMAD4-209ENST00000589941 IL21Q9HBE4 155 aa12.53□□□□□ -0.4
SMAD4-209ENST00000589941 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.41
SMAD4-209ENST00000589941 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
SMAD4-209ENST00000589941 SLC27A5Q9Y2P5 690 aa12.52□□□□□ -0.41
SMAD4-209ENST00000589941 ATRNO75882 1429 aa12.52□□□□□ -0.41
SMAD4-209ENST00000589941 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
SMAD4-209ENST00000589941 LAMC1P11047 1609 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 DDRGK1Q96HY6 314 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 MST1RQ04912 1400 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
SMAD4-209ENST00000589941 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
SMAD4-209ENST00000589941 DDX17Q92841 729 aaKnown RBP12.5□□□□□ -0.41
SMAD4-209ENST00000589941 PLA2G2EQ9NZK7 142 aa12.5□□□□□ -0.41
SMAD4-209ENST00000589941 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
SMAD4-209ENST00000589941 GLI3P10071 1580 aa12.5□□□□□ -0.41
SMAD4-209ENST00000589941 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
SMAD4-209ENST00000589941 TRPM2O94759 1503 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 TLL1O43897 1013 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 ZPR1O75312 459 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 KCNC4Q03721 635 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 NKX2-3Q8TAU0 364 aa12.49□□□□□ -0.41
SMAD4-209ENST00000589941 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 UNC13BO14795 1591 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 ADAMTS13Q76LX8 1427 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 PLEKHG1Q9ULL1 1385 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 NR1I2O75469 434 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 IDI1Q13907 227 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 PCDHGC3Q9UN70 934 aa12.48□□□□□ -0.41
SMAD4-209ENST00000589941 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
SMAD4-209ENST00000589941 NOS1P29475 1434 aa12.47□□□□□ -0.41
SMAD4-209ENST00000589941 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
SMAD4-209ENST00000589941 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
SMAD4-209ENST00000589941 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
SMAD4-209ENST00000589941 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
SMAD4-209ENST00000589941 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.41
SMAD4-209ENST00000589941 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-209ENST00000589941 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms