RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	TAT	P17735	454 aa	Predicted RBP	29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	NBPF6	Q5VWK0	638 aa		29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	NBPF4	Q96M43	638 aa		29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	MYOM1	P52179	1685 aa		29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	INSR	P06213	1382 aa		29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	PAPPA	Q13219	1627 aa		29.23	■■■□□ 2.27
TMC6-213	ENST00000589933	NSD3	Q9BZ95	1437 aa		29.21	■■■□□ 2.27
TMC6-213	ENST00000589933	MEGF6	O75095	1541 aa		29.21	■■■□□ 2.27
TMC6-213	ENST00000589933	SHANK3	Q9BYB0	1731 aa		29.21	■■■□□ 2.27
TMC6-213	ENST00000589933	PRIM1	P49642	420 aa	Known RBP	29.21	■■■□□ 2.27
TMC6-213	ENST00000589933	PTGER2	P43116	358 aa		29.2	■■■□□ 2.26
TMC6-213	ENST00000589933	YY1	P25490	414 aa		29.19	■■■□□ 2.26
TMC6-213	ENST00000589933	HMGB2	P26583	209 aa	Known RBP	29.18	■■■□□ 2.26
TMC6-213	ENST00000589933	HSP90AB2P	Q58FF8	381 aa		29.18	■■■□□ 2.26
TMC6-213	ENST00000589933	USHBP1	Q8N6Y0	703 aa		29.18	■■■□□ 2.26
TMC6-213	ENST00000589933	QSER1	Q2KHR3	1735 aa		29.17	■■■□□ 2.26
TMC6-213	ENST00000589933	LRRC4B	Q9NT99	713 aa		29.17	■■■□□ 2.26
TMC6-213	ENST00000589933	MAP2	P11137	1827 aa	Known RBP	29.16	■■■□□ 2.26
TMC6-213	ENST00000589933	CARD14	Q9BXL6	1004 aa		29.16	■■■□□ 2.26
TMC6-213	ENST00000589933	LY75	O60449	1722 aa		29.16	■■■□□ 2.26
TMC6-213	ENST00000589933	SLC16A10	Q8TF71	515 aa		29.15	■■■□□ 2.26
TMC6-213	ENST00000589933	POLR3GL	Q9BT43	218 aa		29.15	■■■□□ 2.26
TMC6-213	ENST00000589933	PCDH11X	Q9BZA7	1347 aa		29.15	■■■□□ 2.26
TMC6-213	ENST00000589933	PCDH11Y	Q9BZA8	1340 aa		29.15	■■■□□ 2.26
TMC6-213	ENST00000589933	ZNF827	Q17R98	1081 aa		29.14	■■■□□ 2.26
TMC6-213	ENST00000589933	PPM1G	O15355	546 aa	Predicted RBP	29.13	■■■□□ 2.25
TMC6-213	ENST00000589933	TFCP2L1	Q9NZI6	479 aa		29.13	■■■□□ 2.25
TMC6-213	ENST00000589933	AKT1S1	Q96B36	256 aa		29.12	■■■□□ 2.25
TMC6-213	ENST00000589933	ARX	Q96QS3	562 aa		29.12	■■■□□ 2.25
TMC6-213	ENST00000589933	FHDC1	Q9C0D6	1143 aa	Predicted RBP	29.12	■■■□□ 2.25
TMC6-213	ENST00000589933	CCNL1	Q9UK58	526 aa	Predicted RBP	29.11	■■■□□ 2.25
TMC6-213	ENST00000589933	SYT17	Q9BSW7	474 aa		29.1	■■■□□ 2.25
TMC6-213	ENST00000589933	EMILIN1	Q9Y6C2	1016 aa		29.1	■■■□□ 2.25
TMC6-213	ENST00000589933	POLD1	P28340	1107 aa		29.09	■■■□□ 2.25
TMC6-213	ENST00000589933	EIF4G2	P78344	907 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
TMC6-213	ENST00000589933	SGIP1	Q9BQI5	828 aa		29.08	■■■□□ 2.25
TMC6-213	ENST00000589933	NSD2	O96028	1365 aa		29.08	■■■□□ 2.25
TMC6-213	ENST00000589933	ANKRD26	Q9UPS8	1709 aa		29.07	■■■□□ 2.24
TMC6-213	ENST00000589933	TUBGCP6	Q96RT7	1819 aa		29.06	■■■□□ 2.24
TMC6-213	ENST00000589933	WASHC2A	Q641Q2	1341 aa		29.05	■■■□□ 2.24
TMC6-213	ENST00000589933	CCER1	Q8TC90	406 aa	Predicted RBP	29.05	■■■□□ 2.24
TMC6-213	ENST00000589933	KCNQ4	P56696	695 aa		29.04	■■■□□ 2.24
TMC6-213	ENST00000589933	SPG7	Q9UQ90	795 aa		29.04	■■■□□ 2.24
TMC6-213	ENST00000589933	PKD1L3	Q7Z443	1732 aa		29.03	■■■□□ 2.24
TMC6-213	ENST00000589933	PNPLA7	Q6ZV29	1317 aa		29.03	■■■□□ 2.24
TMC6-213	ENST00000589933	ITGB4	P16144	1822 aa		29.02	■■■□□ 2.24
TMC6-213	ENST00000589933	CHD4	Q14839	1912 aa		29.02	■■■□□ 2.24
TMC6-213	ENST00000589933	MAP3K5	Q99683	1374 aa		29.01	■■■□□ 2.24
TMC6-213	ENST00000589933	MSH5	O43196	834 aa		29.01	■■■□□ 2.23
TMC6-213	ENST00000589933	MPRIP	Q6WCQ1	1025 aa		29.01	■■■□□ 2.23
TMC6-213	ENST00000589933	SMARCC1	Q92922	1105 aa	Predicted RBP	29.01	■■■□□ 2.23
TMC6-213	ENST00000589933	CYP27B1	O15528	508 aa		28.99	■■■□□ 2.23
TMC6-213	ENST00000589933	KLHL34	Q8N239	644 aa		28.99	■■■□□ 2.23
TMC6-213	ENST00000589933	C5	P01031	1676 aa		28.99	■■■□□ 2.23
TMC6-213	ENST00000589933	COL24A1	Q17RW2	1714 aa		28.98	■■■□□ 2.23
TMC6-213	ENST00000589933	POLK	Q9UBT6	870 aa		28.98	■■■□□ 2.23
TMC6-213	ENST00000589933	NCAPD2	Q15021	1401 aa		28.97	■■■□□ 2.23
TMC6-213	ENST00000589933	HSPA5	P11021	654 aa	Known RBP	28.97	■■■□□ 2.23
TMC6-213	ENST00000589933	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
TMC6-213	ENST00000589933	PALLD	Q8WX93	1383 aa		28.97	■■■□□ 2.23
TMC6-213	ENST00000589933	TAF1L	Q8IZX4	1826 aa		28.97	■■■□□ 2.23
TMC6-213	ENST00000589933	FLAD1	Q8NFF5	587 aa		28.96	■■■□□ 2.23
TMC6-213	ENST00000589933	EYA1	Q99502	592 aa		28.96	■■■□□ 2.23
TMC6-213	ENST00000589933	TNNT2	P45379	298 aa	Predicted RBP	28.95	■■■□□ 2.22
TMC6-213	ENST00000589933	NKX1-1	Q15270	411 aa	Predicted RBP	28.93	■■■□□ 2.22
TMC6-213	ENST00000589933	PANK3	Q9H999	370 aa		28.93	■■■□□ 2.22
TMC6-213	ENST00000589933	TOGARAM1	Q9Y4F4	1720 aa		28.93	■■■□□ 2.22
TMC6-213	ENST00000589933	GPR162	Q16538	588 aa		28.92	■■■□□ 2.22
TMC6-213	ENST00000589933	IFNL2	Q8IZJ0	200 aa		28.91	■■■□□ 2.22
TMC6-213	ENST00000589933	COL23A1	Q86Y22	540 aa	Predicted RBP	28.89	■■■□□ 2.22
TMC6-213	ENST00000589933	TMOD3	Q9NYL9	352 aa		28.89	■■■□□ 2.22
TMC6-213	ENST00000589933	PLEKHG2	Q9H7P9	1386 aa		28.88	■■■□□ 2.21
TMC6-213	ENST00000589933	EIF4A2	Q14240	407 aa	Known RBP	28.88	■■■□□ 2.21
TMC6-213	ENST00000589933	AK7	Q96M32	723 aa		28.88	■■■□□ 2.21
TMC6-213	ENST00000589933	PIGB	Q92521	554 aa		28.87	■■■□□ 2.21
TMC6-213	ENST00000589933	C4B	P0C0L5	1744 aa		28.86	■■■□□ 2.21
TMC6-213	ENST00000589933	MORC1	Q86VD1	984 aa		28.85	■■■□□ 2.21
TMC6-213	ENST00000589933	KNSTRN	Q9Y448	316 aa		28.85	■■■□□ 2.21
TMC6-213	ENST00000589933	PHKG2	P15735	406 aa		28.84	■■■□□ 2.21
TMC6-213	ENST00000589933	PELP1	Q8IZL8	1130 aa	Known RBP	28.84	■■■□□ 2.21
TMC6-213	ENST00000589933	HSP90AB1	P08238	724 aa	Known RBP	28.82	■■■□□ 2.2
TMC6-213	ENST00000589933	LOC102724428	A0A0B4J2F2	783 aa		28.81	■■■□□ 2.2
TMC6-213	ENST00000589933	SIK1	P57059	783 aa		28.81	■■■□□ 2.2
TMC6-213	ENST00000589933	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.81	■■■□□ 2.2
TMC6-213	ENST00000589933	IGSF1	Q8N6C5	1336 aa		28.8	■■■□□ 2.2
TMC6-213	ENST00000589933	MSL1	Q68DK7	614 aa		28.8	■■■□□ 2.2
TMC6-213	ENST00000589933	UBR3	Q6ZT12	1888 aa		28.8	■■■□□ 2.2
TMC6-213	ENST00000589933	AMOT	Q4VCS5	1084 aa		28.78	■■■□□ 2.2
TMC6-213	ENST00000589933	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.77	■■■□□ 2.2
TMC6-213	ENST00000589933	ATP6V1A	P38606	617 aa		28.76	■■■□□ 2.19
TMC6-213	ENST00000589933	ERVV-2	B6SEH9	535 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	PHF14	O94880	888 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	SSFA2	P28290	1259 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	NLGN2	Q8NFZ4	835 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	DCAF5	Q96JK2	942 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	ASAP1	Q9ULH1	1129 aa		28.75	■■■□□ 2.19
TMC6-213	ENST00000589933	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.74	■■■□□ 2.19
TMC6-213	ENST00000589933	GRIN3B	O60391	1043 aa		28.74	■■■□□ 2.19
TMC6-213	ENST00000589933	CD2AP	Q9Y5K6	639 aa		28.74	■■■□□ 2.19
TMC6-213	ENST00000589933	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.73	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms