RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 POLR3GO15318 223 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
SMARCA4-214ENST00000589677 INCENPQ9NQS7 918 aa17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 CCDC148Q8NFR7 591 aa17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 CASQ1P31415 396 aa17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
SMARCA4-214ENST00000589677 CTAGE5O15320 804 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 EPS15P42566 896 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 TRERF1Q96PN7 1200 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 FAM193AP78312 1265 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 CENPHQ9H3R5 247 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 TXLNAP40222 546 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 CAMK4Q16566 473 aa17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 JAKMIP1Q96N16 626 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-214ENST00000589677 STK3Q13188 491 aa17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 KRT32Q14532 448 aa17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 CAVIN2O95810 425 aa17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 SART3Q15020 963 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-214ENST00000589677 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 MICALCLQ6ZW33 695 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 CCDC171Q6TFL3 1326 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 TROQ12816 1431 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 CT47A1Q5JQC4 288 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
SMARCA4-214ENST00000589677 ALDH1L2Q3SY69 923 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 ODF2Q5BJF6 829 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 SNX21Q969T3 373 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 KIF5CO60282 957 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
SMARCA4-214ENST00000589677 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 TERF1P54274 439 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 STIM1Q13586 685 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 NUTM2FA1L443 756 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 GTF2A1P52655 376 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 FEZ1Q99689 392 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 GPATCH11Q8N954 259 aa17.15■□□□□ 0.34
SMARCA4-214ENST00000589677 RRAGDQ9NQL2 400 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 NAIPQ13075 1403 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 GOLGA6L9A6NEM1 432 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 GPRASP1Q5JY77 1395 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 KIF20AO95235 890 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 IVLP07476 585 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 UBE2HP62256 183 aa17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-214ENST00000589677 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-214ENST00000589677 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-214ENST00000589677 IGHDP01880 384 aa17.13■□□□□ 0.33
SMARCA4-214ENST00000589677 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
SMARCA4-214ENST00000589677 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 LMAN1P49257 510 aa17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 OGFRQ9NZT2 677 aa17.12■□□□□ 0.33
SMARCA4-214ENST00000589677 TUBB4AP04350 444 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 CDKL5O76039 1030 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 CUL7Q14999 1698 aa17.11■□□□□ 0.33
SMARCA4-214ENST00000589677 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 TRIM34Q9BYJ4 488 aa17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 ANKRD30BQ9BXX2 1392 aa17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 CCDC150Q8NCX0 1101 aa17.1■□□□□ 0.33
SMARCA4-214ENST00000589677 FCHSD2O94868 740 aa17.09■□□□□ 0.33
SMARCA4-214ENST00000589677 MX1P20591 662 aa17.09■□□□□ 0.33
SMARCA4-214ENST00000589677 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-214ENST00000589677 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-214ENST00000589677 STX1AQ16623 288 aa17.09■□□□□ 0.33
SMARCA4-214ENST00000589677 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms