RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 COL24A1Q17RW2 1714 aa22.77■■□□□ 1.24
RAB3D-202ENST00000589655 SLC27A3Q5K4L6 730 aa22.77■■□□□ 1.24
RAB3D-202ENST00000589655 PNPLA7Q6ZV29 1317 aa22.77■■□□□ 1.24
RAB3D-202ENST00000589655 FYB1O15117 783 aa22.76■■□□□ 1.23
RAB3D-202ENST00000589655 RRS1Q15050 365 aaKnown RBP22.76■■□□□ 1.23
RAB3D-202ENST00000589655 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
RAB3D-202ENST00000589655 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
RAB3D-202ENST00000589655 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
RAB3D-202ENST00000589655 ZCRB1Q8TBF4 217 aaKnown RBP22.75■■□□□ 1.23
RAB3D-202ENST00000589655 SYTL4Q96C24 671 aaPredicted RBP22.75■■□□□ 1.23
RAB3D-202ENST00000589655 GGNBP2Q9H3C7 697 aa22.75■■□□□ 1.23
RAB3D-202ENST00000589655 ZNF784Q8NCA9 323 aaPredicted RBP22.74■■□□□ 1.23
RAB3D-202ENST00000589655 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
RAB3D-202ENST00000589655 USHBP1Q8N6Y0 703 aa22.72■■□□□ 1.23
RAB3D-202ENST00000589655 SLC16A10Q8TF71 515 aa22.72■■□□□ 1.23
RAB3D-202ENST00000589655 USP47Q96K76 1375 aa22.72■■□□□ 1.23
RAB3D-202ENST00000589655 CHD4Q14839 1912 aa22.71■■□□□ 1.23
RAB3D-202ENST00000589655 TMF1P82094 1093 aa22.69■■□□□ 1.22
RAB3D-202ENST00000589655 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
RAB3D-202ENST00000589655 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
RAB3D-202ENST00000589655 KIF20BQ96Q89 1820 aa22.67■■□□□ 1.22
RAB3D-202ENST00000589655 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
RAB3D-202ENST00000589655 INSRP06213 1382 aa22.66■■□□□ 1.22
RAB3D-202ENST00000589655 CGNL1Q0VF96 1302 aa22.65■■□□□ 1.22
RAB3D-202ENST00000589655 CARD14Q9BXL6 1004 aa22.65■■□□□ 1.22
RAB3D-202ENST00000589655 POLD1P28340 1107 aa22.64■■□□□ 1.21
RAB3D-202ENST00000589655 RAPGEF4Q8WZA2 1011 aa22.64■■□□□ 1.21
RAB3D-202ENST00000589655 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
RAB3D-202ENST00000589655 COL23A1Q86Y22 540 aaPredicted RBP22.63■■□□□ 1.21
RAB3D-202ENST00000589655 KLHL34Q8N239 644 aa22.63■■□□□ 1.21
RAB3D-202ENST00000589655 NLGN2Q8NFZ4 835 aa22.63■■□□□ 1.21
RAB3D-202ENST00000589655 FLT4P35916 1363 aa22.63■■□□□ 1.21
RAB3D-202ENST00000589655 GPR162Q16538 588 aa22.62■■□□□ 1.21
RAB3D-202ENST00000589655 TATP17735 454 aaPredicted RBP22.61■■□□□ 1.21
RAB3D-202ENST00000589655 TOGARAM1Q9Y4F4 1720 aa22.61■■□□□ 1.21
RAB3D-202ENST00000589655 KIF24Q5T7B8 1368 aa22.61■■□□□ 1.21
RAB3D-202ENST00000589655 CYP27B1O15528 508 aa22.6■■□□□ 1.21
RAB3D-202ENST00000589655 EMILIN1Q9Y6C2 1016 aa22.6■■□□□ 1.21
RAB3D-202ENST00000589655 C5P01031 1676 aa22.6■■□□□ 1.21
RAB3D-202ENST00000589655 PCDH11XQ9BZA7 1347 aa22.59■■□□□ 1.21
RAB3D-202ENST00000589655 PCDH11YQ9BZA8 1340 aa22.59■■□□□ 1.21
RAB3D-202ENST00000589655 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
RAB3D-202ENST00000589655 GOLGB1Q14789 3259 aaKnown RBP22.58■■□□□ 1.21
RAB3D-202ENST00000589655 TAF1LQ8IZX4 1826 aa22.58■■□□□ 1.21
RAB3D-202ENST00000589655 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
RAB3D-202ENST00000589655 PKD1L3Q7Z443 1732 aa22.57■■□□□ 1.2
RAB3D-202ENST00000589655 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
RAB3D-202ENST00000589655 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
RAB3D-202ENST00000589655 MSL1Q68DK7 614 aa22.56■■□□□ 1.2
RAB3D-202ENST00000589655 ITGB4P16144 1822 aa22.56■■□□□ 1.2
RAB3D-202ENST00000589655 ANKRD26Q9UPS8 1709 aa22.56■■□□□ 1.2
RAB3D-202ENST00000589655 MSH5O43196 834 aa22.55■■□□□ 1.2
RAB3D-202ENST00000589655 MPRIPQ6WCQ1 1025 aa22.55■■□□□ 1.2
RAB3D-202ENST00000589655 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
RAB3D-202ENST00000589655 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.22e-8■■□□□ 12.1
RAB3D-202ENST00000589655 TRIM26Q12899 539 aaPredicted RBP22.54■■□□□ 1.2
RAB3D-202ENST00000589655 AMIGO3Q86WK7 504 aa22.54■■□□□ 1.2
RAB3D-202ENST00000589655 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
RAB3D-202ENST00000589655 C1QTNF8P60827 252 aa22.51■■□□□ 1.19
RAB3D-202ENST00000589655 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
RAB3D-202ENST00000589655 PIGBQ92521 554 aa22.5■■□□□ 1.19
RAB3D-202ENST00000589655 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
RAB3D-202ENST00000589655 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
RAB3D-202ENST00000589655 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
RAB3D-202ENST00000589655 SMIM5Q71RC9 77 aa22.49■■□□□ 1.19
RAB3D-202ENST00000589655 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
RAB3D-202ENST00000589655 EYA1Q99502 592 aa22.48■■□□□ 1.19
RAB3D-202ENST00000589655 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
RAB3D-202ENST00000589655 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
RAB3D-202ENST00000589655 FLAD1Q8NFF5 587 aa22.46■■□□□ 1.19
RAB3D-202ENST00000589655 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
RAB3D-202ENST00000589655 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
RAB3D-202ENST00000589655 SPG7Q9UQ90 795 aa22.44■■□□□ 1.18
RAB3D-202ENST00000589655 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
RAB3D-202ENST00000589655 LINC00116Q8NCU8 138 aa22.43■■□□□ 1.18
RAB3D-202ENST00000589655 AK7Q96M32 723 aa22.43■■□□□ 1.18
RAB3D-202ENST00000589655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.18
RAB3D-202ENST00000589655 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
RAB3D-202ENST00000589655 SIK1P57059 783 aa22.42■■□□□ 1.18
RAB3D-202ENST00000589655 ASAP1Q9ULH1 1129 aa22.42■■□□□ 1.18
RAB3D-202ENST00000589655 TIMELESSQ9UNS1 1208 aa22.42■■□□□ 1.18
RAB3D-202ENST00000589655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.41■■□□□ 1.18
RAB3D-202ENST00000589655 PHF14O94880 888 aa22.41■■□□□ 1.18
RAB3D-202ENST00000589655 PHKG2P15735 406 aa22.41■■□□□ 1.18
RAB3D-202ENST00000589655 HMGB2P26583 209 aaKnown RBP22.41■■□□□ 1.18
RAB3D-202ENST00000589655 ITPK1Q13572 414 aa22.41■■□□□ 1.18
RAB3D-202ENST00000589655 GIGYF1O75420 1035 aaPredicted RBP22.4■■□□□ 1.18
RAB3D-202ENST00000589655 EIF4A2Q14240 407 aaKnown RBP22.4■■□□□ 1.18
RAB3D-202ENST00000589655 TMOD3Q9NYL9 352 aa22.39■■□□□ 1.17
RAB3D-202ENST00000589655 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
RAB3D-202ENST00000589655 SSFA2P28290 1259 aa22.37■■□□□ 1.17
RAB3D-202ENST00000589655 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
RAB3D-202ENST00000589655 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
RAB3D-202ENST00000589655 ATP10DQ9P241 1426 aa22.36■■□□□ 1.17
RAB3D-202ENST00000589655 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
RAB3D-202ENST00000589655 KDRP35968 1356 aa22.35■■□□□ 1.17
RAB3D-202ENST00000589655 IGSF1Q8N6C5 1336 aa22.34■■□□□ 1.17
RAB3D-202ENST00000589655 GNPATO15228 680 aa22.34■■□□□ 1.17
RAB3D-202ENST00000589655 ATP6V1AP38606 617 aa22.34■■□□□ 1.17
RAB3D-202ENST00000589655 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms