RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 KCNQ4P56696 695 aa16.47■□□□□ 0.23
MBD1-218ENST00000589541 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
MBD1-218ENST00000589541 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
MBD1-218ENST00000589541 SMG6Q86US8 1419 aaKnown RBP16.46■□□□□ 0.23
MBD1-218ENST00000589541 SYT17Q9BSW7 474 aa16.46■□□□□ 0.23
MBD1-218ENST00000589541 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
MBD1-218ENST00000589541 HSP90AB2PQ58FF8 381 aa16.45■□□□□ 0.22
MBD1-218ENST00000589541 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
MBD1-218ENST00000589541 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
MBD1-218ENST00000589541 NSD2O96028 1365 aa16.44■□□□□ 0.22
MBD1-218ENST00000589541 ARXQ96QS3 562 aa16.44■□□□□ 0.22
MBD1-218ENST00000589541 CARD14Q9BXL6 1004 aa16.44■□□□□ 0.22
MBD1-218ENST00000589541 INSRP06213 1382 aa16.43■□□□□ 0.22
MBD1-218ENST00000589541 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
MBD1-218ENST00000589541 TFCP2L1Q9NZI6 479 aa16.43■□□□□ 0.22
MBD1-218ENST00000589541 UTRNP46939 3433 aa16.43■□□□□ 0.22
MBD1-218ENST00000589541 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
MBD1-218ENST00000589541 FLT4P35916 1363 aa16.42■□□□□ 0.22
MBD1-218ENST00000589541 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
MBD1-218ENST00000589541 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
MBD1-218ENST00000589541 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
MBD1-218ENST00000589541 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
MBD1-218ENST00000589541 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
MBD1-218ENST00000589541 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
MBD1-218ENST00000589541 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
MBD1-218ENST00000589541 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
MBD1-218ENST00000589541 KIF24Q5T7B8 1368 aa16.39■□□□□ 0.21
MBD1-218ENST00000589541 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
MBD1-218ENST00000589541 SLC16A10Q8TF71 515 aa16.39■□□□□ 0.21
MBD1-218ENST00000589541 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
MBD1-218ENST00000589541 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
MBD1-218ENST00000589541 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
MBD1-218ENST00000589541 POLD1P28340 1107 aa16.38■□□□□ 0.21
MBD1-218ENST00000589541 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
MBD1-218ENST00000589541 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
MBD1-218ENST00000589541 LY75O60449 1722 aa16.36■□□□□ 0.21
MBD1-218ENST00000589541 MSH5O43196 834 aa16.36■□□□□ 0.21
MBD1-218ENST00000589541 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
MBD1-218ENST00000589541 CYP27B1O15528 508 aa16.35■□□□□ 0.21
MBD1-218ENST00000589541 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
MBD1-218ENST00000589541 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
MBD1-218ENST00000589541 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
MBD1-218ENST00000589541 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
MBD1-218ENST00000589541 GPR162Q16538 588 aa16.33■□□□□ 0.2
MBD1-218ENST00000589541 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
MBD1-218ENST00000589541 PALLDQ8WX93 1383 aa16.33■□□□□ 0.2
MBD1-218ENST00000589541 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
MBD1-218ENST00000589541 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
MBD1-218ENST00000589541 ZNF784Q8NCA9 323 aaPredicted RBP16.32■□□□□ 0.2
MBD1-218ENST00000589541 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
MBD1-218ENST00000589541 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
MBD1-218ENST00000589541 EYA1Q99502 592 aa16.31■□□□□ 0.2
MBD1-218ENST00000589541 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
MBD1-218ENST00000589541 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
MBD1-218ENST00000589541 NCAPD2Q15021 1401 aa16.3■□□□□ 0.2
MBD1-218ENST00000589541 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
MBD1-218ENST00000589541 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
MBD1-218ENST00000589541 ANKRD26Q9UPS8 1709 aa16.29■□□□□ 0.2
MBD1-218ENST00000589541 PIGBQ92521 554 aa16.29■□□□□ 0.2
MBD1-218ENST00000589541 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
MBD1-218ENST00000589541 PKD1L3Q7Z443 1732 aa16.28■□□□□ 0.2
MBD1-218ENST00000589541 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
MBD1-218ENST00000589541 C5P01031 1676 aa16.28■□□□□ 0.2
MBD1-218ENST00000589541 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
MBD1-218ENST00000589541 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
MBD1-218ENST00000589541 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
MBD1-218ENST00000589541 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
MBD1-218ENST00000589541 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
MBD1-218ENST00000589541 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
MBD1-218ENST00000589541 FLAD1Q8NFF5 587 aa16.26■□□□□ 0.19
MBD1-218ENST00000589541 AK7Q96M32 723 aa16.26■□□□□ 0.19
MBD1-218ENST00000589541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
MBD1-218ENST00000589541 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
MBD1-218ENST00000589541 PANK3Q9H999 370 aa16.25■□□□□ 0.19
MBD1-218ENST00000589541 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
MBD1-218ENST00000589541 PHF14O94880 888 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 PHKG2P15735 406 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 ITGB4P16144 1822 aa16.24■□□□□ 0.19
MBD1-218ENST00000589541 C4BP0C0L5 1744 aa16.23■□□□□ 0.19
MBD1-218ENST00000589541 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
MBD1-218ENST00000589541 SIK1P57059 783 aa16.23■□□□□ 0.19
MBD1-218ENST00000589541 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
MBD1-218ENST00000589541 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
MBD1-218ENST00000589541 CHD4Q14839 1912 aa16.23■□□□□ 0.19
MBD1-218ENST00000589541 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
MBD1-218ENST00000589541 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
MBD1-218ENST00000589541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
MBD1-218ENST00000589541 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
MBD1-218ENST00000589541 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
MBD1-218ENST00000589541 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 GNPATO15228 680 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 GRIN3BO60391 1043 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 ITPK1Q13572 414 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
MBD1-218ENST00000589541 SSFA2P28290 1259 aa16.18■□□□□ 0.18
MBD1-218ENST00000589541 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms