RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PRIM1P49642 420 aaKnown RBP21.5■■□□□ 1.03
ACTN4-211ENST00000589528 KCNQ4P56696 695 aa21.5■■□□□ 1.03
ACTN4-211ENST00000589528 ANKRD36BQ8N2N9 1353 aa21.49■■□□□ 1.03
ACTN4-211ENST00000589528 LY75O60449 1722 aa21.49■■□□□ 1.03
ACTN4-211ENST00000589528 MSH5O43196 834 aa21.49■■□□□ 1.03
ACTN4-211ENST00000589528 COL24A1Q17RW2 1714 aa21.49■■□□□ 1.03
ACTN4-211ENST00000589528 PUS7Q96PZ0 661 aaKnown RBP21.48■■□□□ 1.03
ACTN4-211ENST00000589528 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
ACTN4-211ENST00000589528 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
ACTN4-211ENST00000589528 HOXC9P31274 260 aa21.47■■□□□ 1.03
ACTN4-211ENST00000589528 ZCRB1Q8TBF4 217 aaKnown RBP21.47■■□□□ 1.03
ACTN4-211ENST00000589528 CCNL1Q9UK58 526 aaPredicted RBP21.47■■□□□ 1.03
ACTN4-211ENST00000589528 MAP3K19Q56UN5 1328 aa21.47■■□□□ 1.03
ACTN4-211ENST00000589528 SHANK3Q9BYB0 1731 aa21.46■■□□□ 1.03
ACTN4-211ENST00000589528 USP47Q96K76 1375 aa21.44■■□□□ 1.02
ACTN4-211ENST00000589528 NLGN2Q8NFZ4 835 aa21.43■■□□□ 1.02
ACTN4-211ENST00000589528 MEGF6O75095 1541 aa21.42■■□□□ 1.02
ACTN4-211ENST00000589528 SMG6Q86US8 1419 aaKnown RBP21.42■■□□□ 1.02
ACTN4-211ENST00000589528 NSD2O96028 1365 aa21.41■■□□□ 1.02
ACTN4-211ENST00000589528 SLC24A1O60721 1099 aa21.41■■□□□ 1.02
ACTN4-211ENST00000589528 FBLN1P23142 703 aa21.41■■□□□ 1.02
ACTN4-211ENST00000589528 RAPGEF4Q8WZA2 1011 aa21.41■■□□□ 1.02
ACTN4-211ENST00000589528 RTL1A6NKG5 1358 aa21.4■■□□□ 1.02
ACTN4-211ENST00000589528 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
ACTN4-211ENST00000589528 CGNL1Q0VF96 1302 aa21.39■■□□□ 1.01
ACTN4-211ENST00000589528 C5P01031 1676 aa21.39■■□□□ 1.01
ACTN4-211ENST00000589528 ST20-MTHFSA0A0A6YYL1 179 aa21.38■■□□□ 1.01
ACTN4-211ENST00000589528 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
ACTN4-211ENST00000589528 RRS1Q15050 365 aaKnown RBP21.38■■□□□ 1.01
ACTN4-211ENST00000589528 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
ACTN4-211ENST00000589528 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
ACTN4-211ENST00000589528 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
ACTN4-211ENST00000589528 COL23A1Q86Y22 540 aaPredicted RBP21.37■■□□□ 1.01
ACTN4-211ENST00000589528 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
ACTN4-211ENST00000589528 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
ACTN4-211ENST00000589528 TESK2Q96S53 571 aa21.36■■□□□ 1.01
ACTN4-211ENST00000589528 TAF1LQ8IZX4 1826 aa21.35■■□□□ 1.01
ACTN4-211ENST00000589528 YBX3P16989 372 aaKnown RBP eCLIP21.35■■□□□ 1.011e-8■■□□□ 12.8
ACTN4-211ENST00000589528 GGNBP2Q9H3C7 697 aa21.35■■□□□ 1.01
ACTN4-211ENST00000589528 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
ACTN4-211ENST00000589528 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
ACTN4-211ENST00000589528 FLAD1Q8NFF5 587 aa21.33■■□□□ 1.01
ACTN4-211ENST00000589528 KIF20BQ96Q89 1820 aa21.33■■□□□ 1.01
ACTN4-211ENST00000589528 PALLDQ8WX93 1383 aa21.32■■□□□ 1
ACTN4-211ENST00000589528 MPRIPQ6WCQ1 1025 aa21.31■■□□□ 1
ACTN4-211ENST00000589528 ITGB4P16144 1822 aa21.3■■□□□ 1
ACTN4-211ENST00000589528 FYB1O15117 783 aa21.3■■□□□ 1
ACTN4-211ENST00000589528 TMF1P82094 1093 aa21.3■■□□□ 1
ACTN4-211ENST00000589528 AK7Q96M32 723 aa21.29■■□□□ 1
ACTN4-211ENST00000589528 CD2APQ9Y5K6 639 aa21.29■■□□□ 1
ACTN4-211ENST00000589528 INSRP06213 1382 aa21.28■■□□□ 1
ACTN4-211ENST00000589528 FLT4P35916 1363 aa21.28■■□□□ 1
ACTN4-211ENST00000589528 C4BP0C0L5 1744 aa21.27■■□□□ 1
ACTN4-211ENST00000589528 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
ACTN4-211ENST00000589528 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
ACTN4-211ENST00000589528 ATP10DQ9P241 1426 aa21.27■■□□□ 1
ACTN4-211ENST00000589528 CEP350Q5VT06 3117 aa21.26■□□□□ 0.99
ACTN4-211ENST00000589528 GPBP1L1Q9HC44 474 aaPredicted RBP21.26■□□□□ 0.99
ACTN4-211ENST00000589528 PHF14O94880 888 aa21.25■□□□□ 0.99
ACTN4-211ENST00000589528 NSD3Q9BZ95 1437 aa21.25■□□□□ 0.99
ACTN4-211ENST00000589528 UBR3Q6ZT12 1888 aa21.24■□□□□ 0.99
ACTN4-211ENST00000589528 TOGARAM1Q9Y4F4 1720 aa21.24■□□□□ 0.99
ACTN4-211ENST00000589528 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
ACTN4-211ENST00000589528 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
ACTN4-211ENST00000589528 CYP27B1O15528 508 aa21.23■□□□□ 0.99
ACTN4-211ENST00000589528 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
ACTN4-211ENST00000589528 ZNF526Q8TF50 670 aaPredicted RBP21.22■□□□□ 0.99
ACTN4-211ENST00000589528 PPM1GO15355 546 aaPredicted RBP21.21■□□□□ 0.99
ACTN4-211ENST00000589528 WWC3Q9ULE0 1092 aa21.2■□□□□ 0.98
ACTN4-211ENST00000589528 SPG7Q9UQ90 795 aa21.2■□□□□ 0.98
ACTN4-211ENST00000589528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.19■□□□□ 0.98
ACTN4-211ENST00000589528 PIGBQ92521 554 aa21.19■□□□□ 0.98
ACTN4-211ENST00000589528 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
ACTN4-211ENST00000589528 IGSF1Q8N6C5 1336 aa21.19■□□□□ 0.98
ACTN4-211ENST00000589528 SSFA2P28290 1259 aa21.17■□□□□ 0.98
ACTN4-211ENST00000589528 IFFO2Q5TF58 517 aa21.17■□□□□ 0.98
ACTN4-211ENST00000589528 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
ACTN4-211ENST00000589528 LOC102724428A0A0B4J2F2 783 aa21.16■□□□□ 0.98
ACTN4-211ENST00000589528 SIK1P57059 783 aa21.16■□□□□ 0.98
ACTN4-211ENST00000589528 TMOD3Q9NYL9 352 aa21.16■□□□□ 0.98
ACTN4-211ENST00000589528 ADCY9O60503 1353 aa21.15■□□□□ 0.98
ACTN4-211ENST00000589528 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
ACTN4-211ENST00000589528 AMIGO3Q86WK7 504 aa21.15■□□□□ 0.98
ACTN4-211ENST00000589528 GNPATO15228 680 aa21.14■□□□□ 0.97
ACTN4-211ENST00000589528 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
ACTN4-211ENST00000589528 LINC00116Q8NCU8 138 aa21.13■□□□□ 0.97
ACTN4-211ENST00000589528 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
ACTN4-211ENST00000589528 HSPA6P17066 643 aa21.12■□□□□ 0.97
ACTN4-211ENST00000589528 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
ACTN4-211ENST00000589528 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
ACTN4-211ENST00000589528 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
ACTN4-211ENST00000589528 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
ACTN4-211ENST00000589528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
ACTN4-211ENST00000589528 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
ACTN4-211ENST00000589528 WASHC2AQ641Q2 1341 aa21.09■□□□□ 0.97
ACTN4-211ENST00000589528 EYA1Q99502 592 aa21.09■□□□□ 0.97
ACTN4-211ENST00000589528 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.96
ACTN4-211ENST00000589528 MMP10P09238 476 aa21.07■□□□□ 0.96
ACTN4-211ENST00000589528 PHKG2P15735 406 aa21.07■□□□□ 0.96
ACTN4-211ENST00000589528 ITPK1Q13572 414 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms