RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 SCTRP47872 440 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 RELBQ01201 579 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 TRIM46Q7Z4K8 759 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 CCDC97Q96F63 343 aaPredicted RBP7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 PURBQ96QR8 312 aaKnown RBP7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 UCN2Q96RP3 112 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 NOD1Q9Y239 953 aa7.14□□□□□ -1.27
HMGN1P30-201ENST00000589286 PTGIRP43119 386 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 NCOA4Q13772 614 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 PPP1R12CQ9BZL4 782 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 TIMELESSQ9UNS1 1208 aa7.13□□□□□ -1.27
HMGN1P30-201ENST00000589286 USP17L3A6NCW0 530 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 USP17L4A6NCW7 530 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 C11orf95C9JLR9 678 aaPredicted RBP7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 USP17L1Q7RTZ2 530 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 TRIM50Q86XT4 487 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 PLEKHM2Q8IWE5 1019 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 OSBPL3Q9H4L5 887 aa7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 GMPR2Q9P2T1 348 aaKnown RBP7.12□□□□□ -1.27
HMGN1P30-201ENST00000589286 ARID3CA6NKF2 412 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 SPINT1O43278 529 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 GNRH1P01148 92 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 TRIM47Q96LD4 638 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 ZNF395Q9H8N7 513 aaPredicted RBP7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 SERPINA10Q9UK55 444 aa7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 MAFBQ9Y5Q3 323 aaPredicted RBP7.11□□□□□ -1.27
HMGN1P30-201ENST00000589286 MEN1O00255 615 aa7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 LMOD1P29536 600 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 ATP1A2P50993 1020 aa7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 PSME1Q06323 249 aa7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 ESCO1Q5FWF5 840 aa7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 ZNF787Q6DD87 383 aa7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 POLMQ9NP87 494 aaPredicted RBP7.1□□□□□ -1.27
HMGN1P30-201ENST00000589286 A0A1W2PRU2 124 aa7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 TTLL8A6PVC2 850 aa7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 MAN1A2O60476 641 aa7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 GTF2IP78347 998 aa7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 RBM19Q9Y4C8 960 aaKnown RBP7.09□□□□□ -1.27
HMGN1P30-201ENST00000589286 CLN3Q13286 438 aa7.08□□□□□ -1.28
HMGN1P30-201ENST00000589286 MKRN1Q9UHC7 482 aaKnown RBP7.08□□□□□ -1.28
HMGN1P30-201ENST00000589286 GTF2E1P29083 439 aaPredicted RBP7.07□□□□□ -1.28
HMGN1P30-201ENST00000589286 KDF1Q8NAX2 398 aaPredicted RBP7.07□□□□□ -1.28
HMGN1P30-201ENST00000589286 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
HMGN1P30-201ENST00000589286 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
HMGN1P30-201ENST00000589286 SOS2Q07890 1332 aaPredicted RBP7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 GPC1P35052 558 aa7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 CTSOP43234 321 aaPredicted RBP7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 SLC27A3Q5K4L6 730 aa7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 CNKSR1Q969H4 720 aa7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 PCDHGA11Q9Y5H2 935 aa7.06□□□□□ -1.28
HMGN1P30-201ENST00000589286 POTECB2RU33 542 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 RASA1P20936 1047 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 RFX1P22670 979 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 RNF144AP50876 292 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 GDF10P55107 478 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 OGFOD1Q8N543 542 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 ESYT1Q9BSJ8 1104 aa7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
HMGN1P30-201ENST00000589286 FIGNL2A6NMB9 653 aa7.04□□□□□ -1.28
HMGN1P30-201ENST00000589286 BACH1O14867 736 aa7.04□□□□□ -1.28
HMGN1P30-201ENST00000589286 LARGE2Q8N3Y3 721 aa7.04□□□□□ -1.28
HMGN1P30-201ENST00000589286 XAGE2Q96GT9 111 aa7.04□□□□□ -1.28
HMGN1P30-201ENST00000589286 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
HMGN1P30-201ENST00000589286 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 IL2RAP01589 272 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 INHAP05111 366 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 CCDC102BQ68D86 513 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 RNF217Q8TC41 542 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 ZNF594Q96JF6 807 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 DNMT3LQ9UJW3 386 aa7.03□□□□□ -1.28
HMGN1P30-201ENST00000589286 SCNN1DP51172 638 aa7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 CLDN10P78369 228 aa7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 CENPCQ03188 943 aa7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 TLR1Q15399 786 aa7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 FOXD4L5Q5VV16 416 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 TMEM214Q6NUQ4 689 aaKnown RBP7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 LYSMD3Q7Z3D4 306 aa7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 ZSCAN10Q96SZ4 725 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P30-201ENST00000589286 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
HMGN1P30-201ENST00000589286 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms