RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 MYOM1P52179 1685 aa29.77■■■□□ 2.36
NEDD4L-225ENST00000589054 CDCA8Q53HL2 280 aa29.77■■■□□ 2.36
NEDD4L-225ENST00000589054 AKT1S1Q96B36 256 aa29.77■■■□□ 2.36
NEDD4L-225ENST00000589054 SYTL4Q96C24 671 aaPredicted RBP29.76■■■□□ 2.35
NEDD4L-225ENST00000589054 MTFR1LQ9H019 292 aa29.76■■■□□ 2.35
NEDD4L-225ENST00000589054 TIMELESSQ9UNS1 1208 aa29.76■■■□□ 2.35
NEDD4L-225ENST00000589054 EMILIN1Q9Y6C2 1016 aa29.76■■■□□ 2.35
NEDD4L-225ENST00000589054 KAT6BQ8WYB5 2073 aa29.76■■■□□ 2.35
NEDD4L-225ENST00000589054 NSD3Q9BZ95 1437 aa29.75■■■□□ 2.35
NEDD4L-225ENST00000589054 INSRP06213 1382 aa29.75■■■□□ 2.35
NEDD4L-225ENST00000589054 FHDC1Q9C0D6 1143 aaPredicted RBP29.72■■■□□ 2.35
NEDD4L-225ENST00000589054 FLT4P35916 1363 aa29.7■■■□□ 2.35
NEDD4L-225ENST00000589054 SLC27A3Q5K4L6 730 aa29.7■■■□□ 2.35
NEDD4L-225ENST00000589054 SYT17Q9BSW7 474 aa29.7■■■□□ 2.35
NEDD4L-225ENST00000589054 DOT1LQ8TEK3 1739 aa29.7■■■□□ 2.34
NEDD4L-225ENST00000589054 KIF20BQ96Q89 1820 aa29.69■■■□□ 2.34
NEDD4L-225ENST00000589054 YY1P25490 414 aa29.69■■■□□ 2.34
NEDD4L-225ENST00000589054 RAPGEF4Q8WZA2 1011 aa29.68■■■□□ 2.34
NEDD4L-225ENST00000589054 PNPLA7Q6ZV29 1317 aa29.68■■■□□ 2.34
NEDD4L-225ENST00000589054 CLSPNQ9HAW4 1339 aa29.68■■■□□ 2.34
NEDD4L-225ENST00000589054 CYP27B1O15528 508 aa29.66■■■□□ 2.34
NEDD4L-225ENST00000589054 TATP17735 454 aaPredicted RBP29.66■■■□□ 2.34
NEDD4L-225ENST00000589054 CGNL1Q0VF96 1302 aa29.66■■■□□ 2.34
NEDD4L-225ENST00000589054 KIF24Q5T7B8 1368 aa29.65■■■□□ 2.34
NEDD4L-225ENST00000589054 SMG6Q86US8 1419 aaKnown RBP29.65■■■□□ 2.34
NEDD4L-225ENST00000589054 UTRNP46939 3433 aa29.65■■■□□ 2.34
NEDD4L-225ENST00000589054 ARXQ96QS3 562 aa29.64■■■□□ 2.34
NEDD4L-225ENST00000589054 PPM1GO15355 546 aaPredicted RBP29.62■■■□□ 2.33
NEDD4L-225ENST00000589054 POLR3GLQ9BT43 218 aa29.62■■■□□ 2.33
NEDD4L-225ENST00000589054 CCNL1Q9UK58 526 aaPredicted RBP29.61■■■□□ 2.33
NEDD4L-225ENST00000589054 LY75O60449 1722 aa29.6■■■□□ 2.33
NEDD4L-225ENST00000589054 TFCP2L1Q9NZI6 479 aa29.6■■■□□ 2.33
NEDD4L-225ENST00000589054 POLKQ9UBT6 870 aa29.6■■■□□ 2.33
NEDD4L-225ENST00000589054 HSPA5P11021 654 aaKnown RBP29.59■■■□□ 2.33
NEDD4L-225ENST00000589054 WASHC2AQ641Q2 1341 aa29.59■■■□□ 2.33
NEDD4L-225ENST00000589054 NCAPD2Q15021 1401 aa29.59■■■□□ 2.33
NEDD4L-225ENST00000589054 EYA1Q99502 592 aa29.58■■■□□ 2.33
NEDD4L-225ENST00000589054 PCDH11XQ9BZA7 1347 aa29.58■■■□□ 2.33
NEDD4L-225ENST00000589054 PCDH11YQ9BZA8 1340 aa29.58■■■□□ 2.33
NEDD4L-225ENST00000589054 TUBGCP6Q96RT7 1819 aa29.57■■■□□ 2.32
NEDD4L-225ENST00000589054 DCAF8L1A6NGE4 600 aa29.56■■■□□ 2.32
NEDD4L-225ENST00000589054 SLC16A10Q8TF71 515 aa29.55■■■□□ 2.32
NEDD4L-225ENST00000589054 TNNT2P45379 298 aaPredicted RBP29.54■■■□□ 2.32
NEDD4L-225ENST00000589054 MPRIPQ6WCQ1 1025 aa29.54■■■□□ 2.32
NEDD4L-225ENST00000589054 COL23A1Q86Y22 540 aaPredicted RBP29.54■■■□□ 2.32
NEDD4L-225ENST00000589054 MAP3K5Q99683 1374 aa29.52■■■□□ 2.32
NEDD4L-225ENST00000589054 QSER1Q2KHR3 1735 aa29.52■■■□□ 2.32
NEDD4L-225ENST00000589054 ANKRD26Q9UPS8 1709 aa29.52■■■□□ 2.32
NEDD4L-225ENST00000589054 TOGARAM1Q9Y4F4 1720 aa29.51■■■□□ 2.32
NEDD4L-225ENST00000589054 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.31
NEDD4L-225ENST00000589054 PANK3Q9H999 370 aa29.51■■■□□ 2.31
NEDD4L-225ENST00000589054 EIF4A2Q14240 407 aaKnown RBP29.5■■■□□ 2.31
NEDD4L-225ENST00000589054 NKX1-1Q15270 411 aaPredicted RBP29.5■■■□□ 2.31
NEDD4L-225ENST00000589054 PIGBQ92521 554 aa29.5■■■□□ 2.31
NEDD4L-225ENST00000589054 PALLDQ8WX93 1383 aa29.5■■■□□ 2.31
NEDD4L-225ENST00000589054 COL24A1Q17RW2 1714 aa29.49■■■□□ 2.31
NEDD4L-225ENST00000589054 AMIGO3Q86WK7 504 aa29.49■■■□□ 2.31
NEDD4L-225ENST00000589054 PKD1L3Q7Z443 1732 aa29.48■■■□□ 2.31
NEDD4L-225ENST00000589054 MAP2P11137 1827 aaKnown RBP29.48■■■□□ 2.31
NEDD4L-225ENST00000589054 SMIM5Q71RC9 77 aa29.47■■■□□ 2.31
NEDD4L-225ENST00000589054 NLGN2Q8NFZ4 835 aa29.46■■■□□ 2.31
NEDD4L-225ENST00000589054 CCER1Q8TC90 406 aaPredicted RBP29.46■■■□□ 2.31
NEDD4L-225ENST00000589054 KLHL34Q8N239 644 aa29.45■■■□□ 2.31
NEDD4L-225ENST00000589054 POLD1P28340 1107 aa29.44■■■□□ 2.3
NEDD4L-225ENST00000589054 MSL1Q68DK7 614 aa29.44■■■□□ 2.3
NEDD4L-225ENST00000589054 SPG7Q9UQ90 795 aa29.44■■■□□ 2.3
NEDD4L-225ENST00000589054 MSH5O43196 834 aa29.43■■■□□ 2.3
NEDD4L-225ENST00000589054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.42■■■□□ 2.31e-7■□□□□ 11.3
NEDD4L-225ENST00000589054 PHKG2P15735 406 aa29.41■■■□□ 2.3
NEDD4L-225ENST00000589054 ITGB4P16144 1822 aa29.41■■■□□ 2.3
NEDD4L-225ENST00000589054 ZNF784Q8NCA9 323 aaPredicted RBP29.39■■■□□ 2.3
NEDD4L-225ENST00000589054 ASAP1Q9ULH1 1129 aa29.39■■■□□ 2.3
NEDD4L-225ENST00000589054 C5P01031 1676 aa29.39■■■□□ 2.3
NEDD4L-225ENST00000589054 GOLGB1Q14789 3259 aaKnown RBP29.39■■■□□ 2.29
NEDD4L-225ENST00000589054 SMARCC1Q92922 1105 aaPredicted RBP29.38■■■□□ 2.29
NEDD4L-225ENST00000589054 IGSF1Q8N6C5 1336 aa29.38■■■□□ 2.29
NEDD4L-225ENST00000589054 GPR162Q16538 588 aa29.36■■■□□ 2.29
NEDD4L-225ENST00000589054 IFNL2Q8IZJ0 200 aa29.36■■■□□ 2.29
NEDD4L-225ENST00000589054 LINC00116Q8NCU8 138 aa29.36■■■□□ 2.29
NEDD4L-225ENST00000589054 TAF1LQ8IZX4 1826 aa29.36■■■□□ 2.29
NEDD4L-225ENST00000589054 ITPK1Q13572 414 aa29.35■■■□□ 2.29
NEDD4L-225ENST00000589054 LOC102724428A0A0B4J2F2 783 aa29.34■■■□□ 2.29
NEDD4L-225ENST00000589054 SIK1P57059 783 aa29.34■■■□□ 2.29
NEDD4L-225ENST00000589054 ATG3Q9NT62 314 aa29.33■■■□□ 2.29
NEDD4L-225ENST00000589054 TMOD3Q9NYL9 352 aa29.33■■■□□ 2.29
NEDD4L-225ENST00000589054 C4BP0C0L5 1744 aa29.33■■■□□ 2.29
NEDD4L-225ENST00000589054 AEBP1Q8IUX7 1158 aa29.32■■■□□ 2.28
NEDD4L-225ENST00000589054 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.287e-7■■■□□ 19.1
NEDD4L-225ENST00000589054 PHF14O94880 888 aa29.3■■■□□ 2.28
NEDD4L-225ENST00000589054 MORC1Q86VD1 984 aa29.3■■■□□ 2.28
NEDD4L-225ENST00000589054 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
NEDD4L-225ENST00000589054 AK7Q96M32 723 aa29.3■■■□□ 2.28
NEDD4L-225ENST00000589054 SLC4A9Q96Q91 983 aa29.3■■■□□ 2.28
NEDD4L-225ENST00000589054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.29■■■□□ 2.28
NEDD4L-225ENST00000589054 FLAD1Q8NFF5 587 aa29.28■■■□□ 2.28
NEDD4L-225ENST00000589054 AMER1Q5JTC6 1135 aaPredicted RBP29.26■■■□□ 2.27
NEDD4L-225ENST00000589054 ATP6V1AP38606 617 aa29.25■■■□□ 2.27
NEDD4L-225ENST00000589054 KDM6AO15550 1401 aaPredicted RBP29.25■■■□□ 2.27
NEDD4L-225ENST00000589054 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
NEDD4L-225ENST00000589054 UBR3Q6ZT12 1888 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms