RNA–Protein interactions for RNA: ENST00000589022.1

CCDC159-212, Transcript of coiled-coil domain containing 159, humanhuman

TSL 2

Gene CCDC159, Length 732 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC159-212ENST00000589022 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
CCDC159-212ENST00000589022 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC159-212ENST00000589022 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
CCDC159-212ENST00000589022 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
CCDC159-212ENST00000589022 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
CCDC159-212ENST00000589022 LRRC37A3O60309 1634 aa15.2■□□□□ 0.02
CCDC159-212ENST00000589022 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
CCDC159-212ENST00000589022 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
CCDC159-212ENST00000589022 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
CCDC159-212ENST00000589022 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
CCDC159-212ENST00000589022 BCL9O00512 1426 aa15.18■□□□□ 0.02
CCDC159-212ENST00000589022 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC159-212ENST00000589022 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
CCDC159-212ENST00000589022 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
CCDC159-212ENST00000589022 HMOX1P09601 288 aa15.17■□□□□ 0.02
CCDC159-212ENST00000589022 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
CCDC159-212ENST00000589022 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
CCDC159-212ENST00000589022 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
CCDC159-212ENST00000589022 NEFMP07197 916 aa15.16■□□□□ 0.02
CCDC159-212ENST00000589022 FAM196AQ6ZSG2 479 aa15.16■□□□□ 0.02
CCDC159-212ENST00000589022 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
CCDC159-212ENST00000589022 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
CCDC159-212ENST00000589022 IFNL2Q8IZJ0 200 aa15.14■□□□□ 0.01
CCDC159-212ENST00000589022 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
CCDC159-212ENST00000589022 HSP90AB1P08238 724 aaKnown RBP15.13■□□□□ 0.01
CCDC159-212ENST00000589022 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
CCDC159-212ENST00000589022 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
CCDC159-212ENST00000589022 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
CCDC159-212ENST00000589022 PNISRQ8TF01 805 aaKnown RBP15.13■□□□□ 0.01
CCDC159-212ENST00000589022 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
CCDC159-212ENST00000589022 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
CCDC159-212ENST00000589022 PLEKHF1Q96S99 279 aa15.12■□□□□ 0.01
CCDC159-212ENST00000589022 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
CCDC159-212ENST00000589022 CYP27B1O15528 508 aa15.11■□□□□ 0.01
CCDC159-212ENST00000589022 PHKG2P15735 406 aa15.11■□□□□ 0.01
CCDC159-212ENST00000589022 C1orf141Q5JVX7 400 aa15.11■□□□□ 0.01
CCDC159-212ENST00000589022 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
CCDC159-212ENST00000589022 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
CCDC159-212ENST00000589022 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
CCDC159-212ENST00000589022 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
CCDC159-212ENST00000589022 CCDC125Q86Z20 511 aa15.1■□□□□ 0.01
CCDC159-212ENST00000589022 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
CCDC159-212ENST00000589022 RUNDC1Q96C34 613 aa15.09■□□□□ 0.01
CCDC159-212ENST00000589022 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
CCDC159-212ENST00000589022 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
CCDC159-212ENST00000589022 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CCDC159-212ENST00000589022 MIER1Q8N108 512 aa15.07■□□□□ 0
CCDC159-212ENST00000589022 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
CCDC159-212ENST00000589022 FAM182BQ5T319 152 aa15.06■□□□□ 0
CCDC159-212ENST00000589022 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
CCDC159-212ENST00000589022 MAP3K5Q99683 1374 aa15.06■□□□□ 0
CCDC159-212ENST00000589022 ERVV-2B6SEH9 535 aa15.05■□□□□ -0
CCDC159-212ENST00000589022 NFE2L2Q16236 605 aa15.05■□□□□ -0
CCDC159-212ENST00000589022 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
CCDC159-212ENST00000589022 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
CCDC159-212ENST00000589022 NHSQ6T4R5 1651 aa15.03■□□□□ -0
CCDC159-212ENST00000589022 KDM6AO15550 1401 aaPredicted RBP15.03■□□□□ -0
CCDC159-212ENST00000589022 SF3B2Q13435 895 aaKnown RBP15.03■□□□□ -0
CCDC159-212ENST00000589022 RTF1Q92541 710 aaKnown RBP15.03■□□□□ -0
CCDC159-212ENST00000589022 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
CCDC159-212ENST00000589022 CEMIPQ8WUJ3 1361 aa15.02■□□□□ -0
CCDC159-212ENST00000589022 SBF2Q86WG5 1849 aa15.02■□□□□ -0
CCDC159-212ENST00000589022 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
CCDC159-212ENST00000589022 TRIM37O94972 964 aa15.02■□□□□ -0
CCDC159-212ENST00000589022 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
CCDC159-212ENST00000589022 CCDC146Q8IYE0 955 aa15.02■□□□□ -0
CCDC159-212ENST00000589022 NGEFQ8N5V2 710 aa15.02■□□□□ -0
CCDC159-212ENST00000589022 UPF1Q92900 1129 aaKnown RBP eCLIP15.02■□□□□ -0
CCDC159-212ENST00000589022 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
CCDC159-212ENST00000589022 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
CCDC159-212ENST00000589022 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
CCDC159-212ENST00000589022 MRC1P22897 1456 aa15.01□□□□□ -0.01
CCDC159-212ENST00000589022 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
CCDC159-212ENST00000589022 RIPK4P57078 832 aa15□□□□□ -0.01
CCDC159-212ENST00000589022 ACSBG1Q96GR2 724 aa15□□□□□ -0.01
CCDC159-212ENST00000589022 TMOD3Q9NYL9 352 aa15□□□□□ -0.01
CCDC159-212ENST00000589022 SCN11AQ9UI33 1791 aa15□□□□□ -0.01
CCDC159-212ENST00000589022 SOCS7O14512 581 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 PLSCR1O15162 318 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 KCNQ2O43526 872 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 BAG6P46379 1132 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 CABP4P57796 275 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
CCDC159-212ENST00000589022 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 TOGARAM1Q9Y4F4 1720 aa14.99□□□□□ -0.01
CCDC159-212ENST00000589022 APAF1O14727 1248 aa14.98□□□□□ -0.01
CCDC159-212ENST00000589022 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
CCDC159-212ENST00000589022 SMARCC1Q92922 1105 aaPredicted RBP14.98□□□□□ -0.01
CCDC159-212ENST00000589022 LGR6Q9HBX8 967 aa14.98□□□□□ -0.01
CCDC159-212ENST00000589022 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
CCDC159-212ENST00000589022 APBA3O96018 575 aa14.97□□□□□ -0.01
CCDC159-212ENST00000589022 TEFQ10587 303 aa14.97□□□□□ -0.01
CCDC159-212ENST00000589022 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
CCDC159-212ENST00000589022 PIGBQ92521 554 aa14.97□□□□□ -0.01
CCDC159-212ENST00000589022 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.01
CCDC159-212ENST00000589022 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.01
CCDC159-212ENST00000589022 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
CCDC159-212ENST00000589022 ITGB4P16144 1822 aa14.96□□□□□ -0.01
CCDC159-212ENST00000589022 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms