RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PLEKHG2Q9H7P9 1386 aa26.11■■□□□ 1.77
CIRBP-220ENST00000588917 U2AF1L5P0DN76 240 aaPredicted RBP26.11■■□□□ 1.77
CIRBP-220ENST00000588917 U2AF1Q01081 240 aaKnown RBP eCLIP26.11■■□□□ 1.777e-7■■■■□ 23.3
CIRBP-220ENST00000588917 THSD7AQ9UPZ6 1657 aa26.11■■□□□ 1.77
CIRBP-220ENST00000588917 FAM196AQ6ZSG2 479 aa26.1■■□□□ 1.77
CIRBP-220ENST00000588917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.1■■□□□ 1.77
CIRBP-220ENST00000588917 DISP2A7MBM2 1401 aa26.1■■□□□ 1.77
CIRBP-220ENST00000588917 KDRP35968 1356 aa26.09■■□□□ 1.77
CIRBP-220ENST00000588917 FCHSD2O94868 740 aa26.09■■□□□ 1.77
CIRBP-220ENST00000588917 ZCRB1Q8TBF4 217 aaKnown RBP26.09■■□□□ 1.77
CIRBP-220ENST00000588917 SPG7Q9UQ90 795 aa26.09■■□□□ 1.77
CIRBP-220ENST00000588917 PSDA5PKW4 1024 aaPredicted RBP26.08■■□□□ 1.77
CIRBP-220ENST00000588917 HMOX1P09601 288 aa26.08■■□□□ 1.77
CIRBP-220ENST00000588917 WDR43Q15061 677 aaKnown RBP eCLIP26.08■■□□□ 1.77
CIRBP-220ENST00000588917 RGPD2P0DJD1 1756 aa26.07■■□□□ 1.76
CIRBP-220ENST00000588917 AMOTQ4VCS5 1084 aa26.07■■□□□ 1.76
CIRBP-220ENST00000588917 PLEKHO1Q53GL0 409 aaPredicted RBP26.07■■□□□ 1.76
CIRBP-220ENST00000588917 AEBP1Q8IUX7 1158 aa26.06■■□□□ 1.76
CIRBP-220ENST00000588917 MRS2Q9HD23 443 aa26.06■■□□□ 1.76
CIRBP-220ENST00000588917 TRIM37O94972 964 aa26.05■■□□□ 1.76
CIRBP-220ENST00000588917 NEFMP07197 916 aa26.05■■□□□ 1.76
CIRBP-220ENST00000588917 RGPD1P0DJD0 1748 aa26.05■■□□□ 1.76
CIRBP-220ENST00000588917 OVOS2A0A0G2JMS6 1433 aa26.04■■□□□ 1.76
CIRBP-220ENST00000588917 CCER2I3L3R5 266 aa26.02■■□□□ 1.76
CIRBP-220ENST00000588917 MEGF6O75095 1541 aa26.02■■□□□ 1.76
CIRBP-220ENST00000588917 PARP4Q9UKK3 1724 aaKnown RBP26.02■■□□□ 1.76
CIRBP-220ENST00000588917 EZH2Q15910 746 aaKnown RBP26.01■■□□□ 1.75
CIRBP-220ENST00000588917 RSPH6AQ9H0K4 717 aa26.01■■□□□ 1.75
CIRBP-220ENST00000588917 TNS2Q63HR2 1409 aa26■■□□□ 1.75
CIRBP-220ENST00000588917 PCDH11XQ9BZA7 1347 aa26■■□□□ 1.75
CIRBP-220ENST00000588917 PCDH11YQ9BZA8 1340 aa26■■□□□ 1.75
CIRBP-220ENST00000588917 DDX54Q8TDD1 881 aaKnown RBP26■■□□□ 1.75
CIRBP-220ENST00000588917 CAMKK2Q96RR4 588 aa26■■□□□ 1.75
CIRBP-220ENST00000588917 APBA3O96018 575 aa25.99■■□□□ 1.75
CIRBP-220ENST00000588917 R3HDM1Q15032 1099 aaKnown RBP25.99■■□□□ 1.75
CIRBP-220ENST00000588917 WNK3Q9BYP7 1800 aa25.98■■□□□ 1.75
CIRBP-220ENST00000588917 PRKAR2BP31323 418 aa25.98■■□□□ 1.75
CIRBP-220ENST00000588917 CCDC184Q52MB2 194 aa25.98■■□□□ 1.75
CIRBP-220ENST00000588917 MARCH10Q8NA82 808 aaPredicted RBP25.98■■□□□ 1.75
CIRBP-220ENST00000588917 LRP5O75197 1615 aa25.98■■□□□ 1.75
CIRBP-220ENST00000588917 IFNL2Q8IZJ0 200 aa25.97■■□□□ 1.75
CIRBP-220ENST00000588917 PNISRQ8TF01 805 aaKnown RBP25.97■■□□□ 1.75
CIRBP-220ENST00000588917 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
CIRBP-220ENST00000588917 C1orf141Q5JVX7 400 aa25.95■■□□□ 1.74
CIRBP-220ENST00000588917 MIER1Q8N108 512 aa25.95■■□□□ 1.74
CIRBP-220ENST00000588917 GAS2L2Q8NHY3 880 aa25.95■■□□□ 1.74
CIRBP-220ENST00000588917 TNS1Q9HBL0 1735 aaKnown RBP25.94■■□□□ 1.74
CIRBP-220ENST00000588917 HSP90AB1P08238 724 aaKnown RBP25.94■■□□□ 1.74
CIRBP-220ENST00000588917 LRRC37A3O60309 1634 aa25.94■■□□□ 1.74
CIRBP-220ENST00000588917 MAPK8IP3Q9UPT6 1336 aa25.93■■□□□ 1.74
CIRBP-220ENST00000588917 ZNF530Q6P9A1 599 aaPredicted RBP25.93■■□□□ 1.74
CIRBP-220ENST00000588917 CYP27B1O15528 508 aa25.92■■□□□ 1.74
CIRBP-220ENST00000588917 NKX1-1Q15270 411 aaPredicted RBP25.92■■□□□ 1.74
CIRBP-220ENST00000588917 PLEKHF1Q96S99 279 aa25.92■■□□□ 1.74
CIRBP-220ENST00000588917 BCL9O00512 1426 aa25.91■■□□□ 1.74
CIRBP-220ENST00000588917 PHKG2P15735 406 aa25.91■■□□□ 1.74
CIRBP-220ENST00000588917 MTHFSDQ2M296 383 aaKnown RBP25.91■■□□□ 1.74
CIRBP-220ENST00000588917 AKAP4Q5JQC9 854 aa25.91■■□□□ 1.74
CIRBP-220ENST00000588917 PHACTR3Q96KR7 559 aa25.91■■□□□ 1.74
CIRBP-220ENST00000588917 RUNDC1Q96C34 613 aa25.9■■□□□ 1.74
CIRBP-220ENST00000588917 DCAF5Q96JK2 942 aa25.88■■□□□ 1.73
CIRBP-220ENST00000588917 PKD1L3Q7Z443 1732 aa25.88■■□□□ 1.73
CIRBP-220ENST00000588917 GNAT3A8MTJ3 354 aa25.85■■□□□ 1.73
CIRBP-220ENST00000588917 NBPF14Q5TI25 921 aa25.85■■□□□ 1.73
CIRBP-220ENST00000588917 FAM9BQ8IZU0 186 aa25.85■■□□□ 1.73
CIRBP-220ENST00000588917 HTATSF1O43719 755 aaKnown RBP25.84■■□□□ 1.73
CIRBP-220ENST00000588917 NFE2L2Q16236 605 aa25.83■■□□□ 1.73
CIRBP-220ENST00000588917 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
CIRBP-220ENST00000588917 RTF1Q92541 710 aaKnown RBP25.83■■□□□ 1.73
CIRBP-220ENST00000588917 ERVV-2B6SEH9 535 aa25.82■■□□□ 1.72
CIRBP-220ENST00000588917 BCL11BQ9C0K0 894 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-220ENST00000588917 MPRIPQ6WCQ1 1025 aa25.8■■□□□ 1.72
CIRBP-220ENST00000588917 MAP3K5Q99683 1374 aa25.8■■□□□ 1.72
CIRBP-220ENST00000588917 ACSBG1Q96GR2 724 aa25.79■■□□□ 1.72
CIRBP-220ENST00000588917 SHANK3Q9BYB0 1731 aa25.79■■□□□ 1.72
CIRBP-220ENST00000588917 TMPOP42166 694 aaKnown RBP25.78■■□□□ 1.72
CIRBP-220ENST00000588917 PRIM1P49642 420 aaKnown RBP25.78■■□□□ 1.72
CIRBP-220ENST00000588917 RIPK4P57078 832 aa25.78■■□□□ 1.72
CIRBP-220ENST00000588917 LMOD3Q0VAK6 560 aa25.78■■□□□ 1.72
CIRBP-220ENST00000588917 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
CIRBP-220ENST00000588917 PLSCR1O15162 318 aa25.76■■□□□ 1.71
CIRBP-220ENST00000588917 RNMTO43148 476 aaKnown RBP25.76■■□□□ 1.71
CIRBP-220ENST00000588917 CABP4P57796 275 aa25.76■■□□□ 1.71
CIRBP-220ENST00000588917 APAF1O14727 1248 aa25.75■■□□□ 1.71
CIRBP-220ENST00000588917 TMOD3Q9NYL9 352 aa25.75■■□□□ 1.71
CIRBP-220ENST00000588917 RREB1Q92766 1687 aa25.74■■□□□ 1.71
CIRBP-220ENST00000588917 KCNQ2O43526 872 aa25.74■■□□□ 1.71
CIRBP-220ENST00000588917 NCBP3Q53F19 620 aaKnown RBP25.74■■□□□ 1.71
CIRBP-220ENST00000588917 LGR6Q9HBX8 967 aa25.74■■□□□ 1.71
CIRBP-220ENST00000588917 TEFQ10587 303 aa25.73■■□□□ 1.71
CIRBP-220ENST00000588917 NGEFQ8N5V2 710 aa25.73■■□□□ 1.71
CIRBP-220ENST00000588917 IL17REQ8NFR9 667 aa25.73■■□□□ 1.71
CIRBP-220ENST00000588917 NEUROD2Q15784 382 aa25.72■■□□□ 1.71
CIRBP-220ENST00000588917 NUP188Q5SRE5 1749 aa25.71■■□□□ 1.71
CIRBP-220ENST00000588917 NFATC2IPQ8NCF5 419 aa25.71■■□□□ 1.71
CIRBP-220ENST00000588917 SLC52A2Q9HAB3 445 aa25.71■■□□□ 1.71
CIRBP-220ENST00000588917 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
CIRBP-220ENST00000588917 PTF1AQ7RTS3 328 aa25.69■■□□□ 1.7
CIRBP-220ENST00000588917 PIGBQ92521 554 aa25.69■■□□□ 1.7
CIRBP-220ENST00000588917 SPON1Q9HCB6 807 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms