RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ROCK1Q13464 1354 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 SMAPO00193 183 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 DCCP43146 1447 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
CHUK-203ENST00000588656 ORAI2Q96SN7 254 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
CHUK-203ENST00000588656 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
CHUK-203ENST00000588656 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 C1orf167Q5SNV9 1468 aa8.5□□□□□ -1.05
CHUK-203ENST00000588656 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CHUK-203ENST00000588656 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
CHUK-203ENST00000588656 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
CHUK-203ENST00000588656 SRCAPQ6ZRS2 3230 aa8.49□□□□□ -1.05
CHUK-203ENST00000588656 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
CHUK-203ENST00000588656 LAMC1P11047 1609 aa8.48□□□□□ -1.05
CHUK-203ENST00000588656 CDK12Q9NYV4 1490 aaPredicted RBP8.48□□□□□ -1.05
CHUK-203ENST00000588656 IFT172Q9UG01 1749 aa8.48□□□□□ -1.05
CHUK-203ENST00000588656 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
CHUK-203ENST00000588656 LRRC59Q96AG4 307 aaKnown RBP8.47□□□□□ -1.05
CHUK-203ENST00000588656 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.06
CHUK-203ENST00000588656 NUDT18Q6ZVK8 323 aa8.46□□□□□ -1.06
CHUK-203ENST00000588656 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
CHUK-203ENST00000588656 USP21Q9UK80 565 aa8.46□□□□□ -1.06
CHUK-203ENST00000588656 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.06
CHUK-203ENST00000588656 ABCA3Q99758 1704 aa8.46□□□□□ -1.06
CHUK-203ENST00000588656 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
CHUK-203ENST00000588656 CDHR5Q9HBB8 845 aa8.45□□□□□ -1.06
CHUK-203ENST00000588656 FMN2Q9NZ56 1722 aa8.45□□□□□ -1.06
CHUK-203ENST00000588656 ESCO1Q5FWF5 840 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 TTC13Q8NBP0 860 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 STK26Q9P289 416 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 NAIPQ13075 1403 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 GLI3P10071 1580 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
CHUK-203ENST00000588656 KNDC1Q76NI1 1749 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
CHUK-203ENST00000588656 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 TJAP1Q5JTD0 557 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 WAPLQ7Z5K2 1190 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 NPDC1Q9NQX5 325 aaPredicted RBP8.43□□□□□ -1.06
CHUK-203ENST00000588656 ATRNO75882 1429 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 PXDNQ92626 1479 aa8.43□□□□□ -1.06
CHUK-203ENST00000588656 FOXO3O43524 673 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 IL21Q9HBE4 155 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 SOS2Q07890 1332 aaPredicted RBP8.42□□□□□ -1.06
CHUK-203ENST00000588656 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 PLEKHH1Q9ULM0 1364 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 MYOM2P54296 1465 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 USP32Q8NFA0 1604 aa8.42□□□□□ -1.06
CHUK-203ENST00000588656 ADGRF5Q8IZF2 1346 aa8.41□□□□□ -1.06
CHUK-203ENST00000588656 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
CHUK-203ENST00000588656 RGL3Q3MIN7 710 aa8.41□□□□□ -1.06
CHUK-203ENST00000588656 TRPC5Q9UL62 973 aaPredicted RBP8.41□□□□□ -1.06
CHUK-203ENST00000588656 KIF1AQ12756 1690 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 BCL9LQ86UU0 1499 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 TMEM132EQ6IEE7 984 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 PADI6Q6TGC4 694 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 MTRQ99707 1265 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.06
CHUK-203ENST00000588656 RNF40O75150 1001 aa8.39□□□□□ -1.07
CHUK-203ENST00000588656 SAFB2Q14151 953 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHUK-203ENST00000588656 DEFB132Q7Z7B7 95 aa8.39□□□□□ -1.07
CHUK-203ENST00000588656 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
CHUK-203ENST00000588656 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
CHUK-203ENST00000588656 HFM1A2PYH4 1435 aa8.38□□□□□ -1.07
CHUK-203ENST00000588656 RRBP1Q9P2E9 1410 aaKnown RBP8.38□□□□□ -1.07
CHUK-203ENST00000588656 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
CHUK-203ENST00000588656 NRAPQ86VF7 1730 aa8.37□□□□□ -1.07
CHUK-203ENST00000588656 NPHP3Q7Z494 1330 aa8.37□□□□□ -1.07
CHUK-203ENST00000588656 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
CHUK-203ENST00000588656 LMOD2Q6P5Q4 547 aa8.37□□□□□ -1.07
CHUK-203ENST00000588656 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
CHUK-203ENST00000588656 EYA1Q99502 592 aa8.37□□□□□ -1.07
CHUK-203ENST00000588656 NWD2Q9ULI1 1742 aa8.37□□□□□ -1.07
CHUK-203ENST00000588656 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
CHUK-203ENST00000588656 APLP1P51693 650 aa8.36□□□□□ -1.07
CHUK-203ENST00000588656 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
CHUK-203ENST00000588656 MYT1Q01538 1121 aa8.36□□□□□ -1.07
CHUK-203ENST00000588656 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
CHUK-203ENST00000588656 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
CHUK-203ENST00000588656 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
CHUK-203ENST00000588656 KCNV2Q8TDN2 545 aa8.35□□□□□ -1.07
CHUK-203ENST00000588656 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
CHUK-203ENST00000588656 CCDC144AA2RUR9 1427 aa8.35□□□□□ -1.07
CHUK-203ENST00000588656 PRAG1Q86YV5 1406 aa8.35□□□□□ -1.07
CHUK-203ENST00000588656 TRPM3Q9HCF6 1732 aaPredicted RBP8.34□□□□□ -1.07
CHUK-203ENST00000588656 SLIT2O94813 1529 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 Q6ZNB5 142 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
CHUK-203ENST00000588656 CRYBG1Q9Y4K1 1723 aa8.34□□□□□ -1.07
CHUK-203ENST00000588656 LRPPRCP42704 1394 aaKnown RBP8.34□□□□□ -1.07
CHUK-203ENST00000588656 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
CHUK-203ENST00000588656 PIK3C2GO75747 1445 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms