RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
SDF2-207ENST00000588472 RREB1Q92766 1687 aa12.1□□□□□ -0.47
SDF2-207ENST00000588472 SBF2Q86WG5 1849 aa12.1□□□□□ -0.47
SDF2-207ENST00000588472 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
SDF2-207ENST00000588472 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
SDF2-207ENST00000588472 NUP188Q5SRE5 1749 aa12.09□□□□□ -0.47
SDF2-207ENST00000588472 MEGF6O75095 1541 aa12.09□□□□□ -0.47
SDF2-207ENST00000588472 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
SDF2-207ENST00000588472 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
SDF2-207ENST00000588472 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
SDF2-207ENST00000588472 KAT6BQ8WYB5 2073 aa12.08□□□□□ -0.48
SDF2-207ENST00000588472 PLSCR1O15162 318 aa12.08□□□□□ -0.48
SDF2-207ENST00000588472 CC2D1BQ5T0F9 858 aaKnown RBP12.08□□□□□ -0.48
SDF2-207ENST00000588472 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
SDF2-207ENST00000588472 EYA1Q99502 592 aa12.07□□□□□ -0.48
SDF2-207ENST00000588472 BCL9O00512 1426 aa12.06□□□□□ -0.48
SDF2-207ENST00000588472 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
SDF2-207ENST00000588472 TXNRD1Q16881 649 aa12.06□□□□□ -0.48
SDF2-207ENST00000588472 PROM2Q8N271 834 aa12.06□□□□□ -0.48
SDF2-207ENST00000588472 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
SDF2-207ENST00000588472 NSD2O96028 1365 aa12.05□□□□□ -0.48
SDF2-207ENST00000588472 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
SDF2-207ENST00000588472 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
SDF2-207ENST00000588472 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
SDF2-207ENST00000588472 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
SDF2-207ENST00000588472 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 KCNQ4P56696 695 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
SDF2-207ENST00000588472 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
SDF2-207ENST00000588472 MTHFSP49914 203 aa12.02□□□□□ -0.49
SDF2-207ENST00000588472 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
SDF2-207ENST00000588472 CYP27B1O15528 508 aa12.01□□□□□ -0.49
SDF2-207ENST00000588472 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
SDF2-207ENST00000588472 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
SDF2-207ENST00000588472 BTAF1O14981 1849 aa12.01□□□□□ -0.49
SDF2-207ENST00000588472 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
SDF2-207ENST00000588472 PTGER2P43116 358 aa12□□□□□ -0.49
SDF2-207ENST00000588472 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
SDF2-207ENST00000588472 PDGFDQ9GZP0 370 aaPredicted RBP12□□□□□ -0.49
SDF2-207ENST00000588472 DOT1LQ8TEK3 1739 aa12□□□□□ -0.49
SDF2-207ENST00000588472 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
SDF2-207ENST00000588472 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
SDF2-207ENST00000588472 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
SDF2-207ENST00000588472 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
SDF2-207ENST00000588472 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
SDF2-207ENST00000588472 RGPD3A6NKT7 1758 aaPredicted RBP11.98□□□□□ -0.49
SDF2-207ENST00000588472 RGPD4Q7Z3J3 1758 aa11.98□□□□□ -0.49
SDF2-207ENST00000588472 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
SDF2-207ENST00000588472 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
SDF2-207ENST00000588472 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
SDF2-207ENST00000588472 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
SDF2-207ENST00000588472 HMOX1P09601 288 aa11.97□□□□□ -0.49
SDF2-207ENST00000588472 PHKG2P15735 406 aa11.97□□□□□ -0.49
SDF2-207ENST00000588472 IL13P35225 146 aa11.97□□□□□ -0.49
SDF2-207ENST00000588472 PLEKHO1Q53GL0 409 aaPredicted RBP11.97□□□□□ -0.49
SDF2-207ENST00000588472 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
SDF2-207ENST00000588472 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
SDF2-207ENST00000588472 ZNF827Q17R98 1081 aa11.96□□□□□ -0.49
SDF2-207ENST00000588472 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
SDF2-207ENST00000588472 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
SDF2-207ENST00000588472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.49
SDF2-207ENST00000588472 CCNL1Q9UK58 526 aaPredicted RBP11.96□□□□□ -0.49
SDF2-207ENST00000588472 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
SDF2-207ENST00000588472 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
SDF2-207ENST00000588472 PIGBQ92521 554 aa11.95□□□□□ -0.5
SDF2-207ENST00000588472 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
SDF2-207ENST00000588472 PKD1L3Q7Z443 1732 aa11.94□□□□□ -0.5
SDF2-207ENST00000588472 ADRA2BP18089 450 aa11.94□□□□□ -0.5
SDF2-207ENST00000588472 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
SDF2-207ENST00000588472 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
SDF2-207ENST00000588472 ARXQ96QS3 562 aa11.94□□□□□ -0.5
SDF2-207ENST00000588472 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
SDF2-207ENST00000588472 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
SDF2-207ENST00000588472 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
SDF2-207ENST00000588472 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
SDF2-207ENST00000588472 GPR162Q16538 588 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
SDF2-207ENST00000588472 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
SDF2-207ENST00000588472 ITGB4P16144 1822 aa11.91□□□□□ -0.5
SDF2-207ENST00000588472 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
SDF2-207ENST00000588472 CABP4P57796 275 aa11.91□□□□□ -0.5
SDF2-207ENST00000588472 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
SDF2-207ENST00000588472 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
SDF2-207ENST00000588472 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
SDF2-207ENST00000588472 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
SDF2-207ENST00000588472 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
SDF2-207ENST00000588472 UTRNP46939 3433 aa11.9□□□□□ -0.5
SDF2-207ENST00000588472 LY75O60449 1722 aa11.89□□□□□ -0.51
SDF2-207ENST00000588472 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
SDF2-207ENST00000588472 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
SDF2-207ENST00000588472 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
SDF2-207ENST00000588472 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms